RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 EAPPQ56P03 285 aaPredicted RBP14.91□□□□□ -0.02
COPB1-208ENST00000532088 MAPKAPK5Q8IW41 473 aa14.91□□□□□ -0.02
COPB1-208ENST00000532088 NAPBQ9H115 298 aa14.91□□□□□ -0.02
COPB1-208ENST00000532088 VEZTQ9HBM0 779 aa14.91□□□□□ -0.02
COPB1-208ENST00000532088 ANO2Q9NQ90 1003 aa14.91□□□□□ -0.02
COPB1-208ENST00000532088 FAM205CA6NFA0 338 aa14.9□□□□□ -0.02
COPB1-208ENST00000532088 TCP10L2B9ZVM9 353 aa14.9□□□□□ -0.02
COPB1-208ENST00000532088 FGAP02671 866 aa14.9□□□□□ -0.02
COPB1-208ENST00000532088 APPP05067 770 aa14.9□□□□□ -0.02
COPB1-208ENST00000532088 TDO2P48775 406 aa14.9□□□□□ -0.02
COPB1-208ENST00000532088 NT5C2P49902 561 aa14.9□□□□□ -0.02
COPB1-208ENST00000532088 PICALMQ13492 652 aa14.9□□□□□ -0.02
COPB1-208ENST00000532088 RASA3Q14644 834 aa14.9□□□□□ -0.02
COPB1-208ENST00000532088 CDC37L1Q7L3B6 337 aa14.9□□□□□ -0.02
COPB1-208ENST00000532088 TTC6Q86TZ1 520 aa14.9□□□□□ -0.02
COPB1-208ENST00000532088 SULF1Q8IWU6 871 aa14.9□□□□□ -0.02
COPB1-208ENST00000532088 HOOK2Q96ED9 719 aa14.9□□□□□ -0.02
COPB1-208ENST00000532088 DEFB129Q9H1M3 183 aa14.9□□□□□ -0.02
COPB1-208ENST00000532088 EHD4Q9H223 541 aa14.9□□□□□ -0.02
COPB1-208ENST00000532088 ASTN2O75129 1339 aaPredicted RBP14.9□□□□□ -0.02
COPB1-208ENST00000532088 ROBO3Q96MS0 1386 aa14.89□□□□□ -0.03
COPB1-208ENST00000532088 HLA-DOAP06340 250 aa14.89□□□□□ -0.03
COPB1-208ENST00000532088 CACNB3P54284 484 aa14.89□□□□□ -0.03
COPB1-208ENST00000532088 PTH1RQ03431 593 aa14.89□□□□□ -0.03
COPB1-208ENST00000532088 C6orf132Q5T0Z8 1188 aa14.89□□□□□ -0.03
COPB1-208ENST00000532088 CTR9Q6PD62 1173 aa14.89□□□□□ -0.03
COPB1-208ENST00000532088 METTL16Q86W50 562 aaKnown RBP14.89□□□□□ -0.03
COPB1-208ENST00000532088 GPIHBP1Q8IV16 184 aa14.89□□□□□ -0.03
COPB1-208ENST00000532088 ZNF526Q8TF50 670 aaPredicted RBP14.89□□□□□ -0.03
COPB1-208ENST00000532088 BACH2Q9BYV9 841 aa14.89□□□□□ -0.03
COPB1-208ENST00000532088 MCM9Q9NXL9 1143 aa14.89□□□□□ -0.03
COPB1-208ENST00000532088 PI4KBQ9UBF8 816 aa14.89□□□□□ -0.03
COPB1-208ENST00000532088 ANAPC4Q9UJX5 808 aa14.89□□□□□ -0.03
COPB1-208ENST00000532088 MYH1P12882 1939 aa14.88□□□□□ -0.03
COPB1-208ENST00000532088 USP17L12C9JPN9 530 aa14.88□□□□□ -0.03
COPB1-208ENST00000532088 USP17L21D6R901 530 aa14.88□□□□□ -0.03
COPB1-208ENST00000532088 PCP11498 1178 aaKnown RBP14.88□□□□□ -0.03
COPB1-208ENST00000532088 C12orf60Q5U649 245 aa14.88□□□□□ -0.03
COPB1-208ENST00000532088 KRT26Q7Z3Y9 468 aa14.88□□□□□ -0.03
COPB1-208ENST00000532088 FOXP4Q8IVH2 680 aaPredicted RBP14.88□□□□□ -0.03
COPB1-208ENST00000532088 TEPSINQ96N21 525 aa14.88□□□□□ -0.03
COPB1-208ENST00000532088 USP26Q9BXU7 913 aa14.88□□□□□ -0.03
COPB1-208ENST00000532088 LAMB1P07942 1786 aa14.88□□□□□ -0.03
COPB1-208ENST00000532088 POLR3DP05423 398 aaPredicted RBP14.87□□□□□ -0.03
COPB1-208ENST00000532088 SLC3A2P08195 630 aaKnown RBP14.87□□□□□ -0.03
COPB1-208ENST00000532088 MAP3K10Q02779 954 aa14.87□□□□□ -0.03
COPB1-208ENST00000532088 TCP10Q12799 353 aa14.87□□□□□ -0.03
COPB1-208ENST00000532088 NECTIN1Q15223 517 aa14.87□□□□□ -0.03
COPB1-208ENST00000532088 IMMTQ16891 758 aaKnown RBP14.87□□□□□ -0.03
COPB1-208ENST00000532088 TSR1Q2NL82 804 aaKnown RBP14.87□□□□□ -0.03
COPB1-208ENST00000532088 SUPT20HL1Q3ZLR7 823 aa14.87□□□□□ -0.03
COPB1-208ENST00000532088 RNF20Q5VTR2 975 aa14.87□□□□□ -0.03
COPB1-208ENST00000532088 SH3BP5LQ7L8J4 393 aa14.87□□□□□ -0.03
COPB1-208ENST00000532088 ZNF784Q8NCA9 323 aaPredicted RBP14.87□□□□□ -0.03
COPB1-208ENST00000532088 KCNB2Q92953 911 aa14.87□□□□□ -0.03
COPB1-208ENST00000532088 HERC5Q9UII4 1024 aaKnown RBP14.87□□□□□ -0.03
COPB1-208ENST00000532088 RBM8AQ9Y5S9 174 aaKnown RBP14.87□□□□□ -0.03
COPB1-208ENST00000532088 LAMA4Q16363 1823 aa14.87□□□□□ -0.03
COPB1-208ENST00000532088 POTEB3A0JP26 581 aa14.86□□□□□ -0.03
COPB1-208ENST00000532088 DDTLA6NHG4 134 aaPredicted RBP14.86□□□□□ -0.03
COPB1-208ENST00000532088 ZNF213O14771 459 aa14.86□□□□□ -0.03
COPB1-208ENST00000532088 MCCP23508 829 aa14.86□□□□□ -0.03
COPB1-208ENST00000532088 HSPA4P34932 840 aa14.86□□□□□ -0.03
COPB1-208ENST00000532088 GABPAQ06546 454 aa14.86□□□□□ -0.03
COPB1-208ENST00000532088 PPARAQ07869 468 aa14.86□□□□□ -0.03
COPB1-208ENST00000532088 TSGA10IPQ3SY00 556 aa14.86□□□□□ -0.03
COPB1-208ENST00000532088 POTEBQ6S5H4 581 aa14.86□□□□□ -0.03
COPB1-208ENST00000532088 ZSCAN29Q8IWY8 852 aaPredicted RBP14.86□□□□□ -0.03
COPB1-208ENST00000532088 ZFPM1Q8IX07 1006 aa14.86□□□□□ -0.03
COPB1-208ENST00000532088 RBM46Q8TBY0 533 aaKnown RBP14.86□□□□□ -0.03
COPB1-208ENST00000532088 HS3ST6Q96QI5 342 aa14.86□□□□□ -0.03
COPB1-208ENST00000532088 CSRNP1Q96S65 589 aa14.86□□□□□ -0.03
COPB1-208ENST00000532088 TMEM39BQ9GZU3 492 aa14.86□□□□□ -0.03
COPB1-208ENST00000532088 ZNF287Q9HBT7 754 aa14.86□□□□□ -0.03
COPB1-208ENST00000532088 SWAP70Q9UH65 585 aa14.86□□□□□ -0.03
COPB1-208ENST00000532088 PALD1Q9ULE6 856 aa14.86□□□□□ -0.03
COPB1-208ENST00000532088 BAZ2AQ9UIF9 1905 aaKnown RBP14.86□□□□□ -0.03
COPB1-208ENST00000532088 GPR37O15354 613 aa14.85□□□□□ -0.03
COPB1-208ENST00000532088 FGRP09769 529 aa14.85□□□□□ -0.03
COPB1-208ENST00000532088 PLCD1P51178 756 aa14.85□□□□□ -0.03
COPB1-208ENST00000532088 DCAF15Q66K64 600 aa14.85□□□□□ -0.03
COPB1-208ENST00000532088 C16orf86Q6ZW13 317 aa14.85□□□□□ -0.03
COPB1-208ENST00000532088 RNF41Q9H4P4 317 aaPredicted RBP14.85□□□□□ -0.03
COPB1-208ENST00000532088 UPF2Q9HAU5 1272 aaKnown RBP14.85□□□□□ -0.03
COPB1-208ENST00000532088 SAP30BPQ9UHR5 308 aaKnown RBP14.85□□□□□ -0.03
COPB1-208ENST00000532088 SERPINB13Q9UIV8 391 aa14.85□□□□□ -0.03
COPB1-208ENST00000532088 POLR2AP24928 1970 aaKnown RBP14.84□□□□□ -0.03
COPB1-208ENST00000532088 POTEMA6NI47 508 aa14.84□□□□□ -0.03
COPB1-208ENST00000532088 TOMM70O94826 608 aa14.84□□□□□ -0.03
COPB1-208ENST00000532088 NF2P35240 595 aa14.84□□□□□ -0.03
COPB1-208ENST00000532088 TPRNQ4KMQ1 711 aa14.84□□□□□ -0.03
COPB1-208ENST00000532088 USP48Q86UV5 1035 aa14.84□□□□□ -0.03
COPB1-208ENST00000532088 ZNF687Q8N1G0 1237 aa14.84□□□□□ -0.03
COPB1-208ENST00000532088 SMC1BQ8NDV3 1235 aa14.84□□□□□ -0.03
COPB1-208ENST00000532088 STAG1Q8WVM7 1258 aa14.84□□□□□ -0.03
COPB1-208ENST00000532088 IL17RAQ96F46 866 aa14.84□□□□□ -0.03
COPB1-208ENST00000532088 CDHR5Q9HBB8 845 aa14.84□□□□□ -0.03
COPB1-208ENST00000532088 NPDC1Q9NQX5 325 aaPredicted RBP14.84□□□□□ -0.03
COPB1-208ENST00000532088 SIPA1L1O43166 1804 aa14.84□□□□□ -0.03
COPB1-208ENST00000532088 MINDY4BA8MYZ0 360 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 135.8 ms