RNA–Protein interactions for RNA: ENST00000531625.1

UBXN1-212, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-212ENST00000531625 PLXNB2O15031 1838 aa23.36■■□□□ 1.33
UBXN1-212ENST00000531625 ATF7IPQ6VMQ6 1270 aa23.35■■□□□ 1.33
UBXN1-212ENST00000531625 TRIB2Q92519 343 aa23.35■■□□□ 1.33
UBXN1-212ENST00000531625 DNAJC18Q9H819 358 aa23.35■■□□□ 1.33
UBXN1-212ENST00000531625 FLT1P17948 1338 aa23.34■■□□□ 1.33
UBXN1-212ENST00000531625 BCAR3O75815 825 aa23.34■■□□□ 1.33
UBXN1-212ENST00000531625 HERVK_113P62684 666 aa23.34■■□□□ 1.33
UBXN1-212ENST00000531625 JAG1P78504 1218 aa23.34■■□□□ 1.33
UBXN1-212ENST00000531625 GPRC5AQ8NFJ5 357 aa23.34■■□□□ 1.33
UBXN1-212ENST00000531625 TGFBRAP1Q8WUH2 860 aa23.34■■□□□ 1.33
UBXN1-212ENST00000531625 SOCS4Q8WXH5 440 aa23.34■■□□□ 1.33
UBXN1-212ENST00000531625 NUDT12Q9BQG2 462 aa23.34■■□□□ 1.33
UBXN1-212ENST00000531625 SNRKQ9NRH2 765 aa23.34■■□□□ 1.33
UBXN1-212ENST00000531625 USP17L10C9JJH3 530 aa23.33■■□□□ 1.33
UBXN1-212ENST00000531625 CCDC158Q5M9N0 1113 aa23.33■■□□□ 1.33
UBXN1-212ENST00000531625 TTC39AQ5SRH9 613 aa23.33■■□□□ 1.33
UBXN1-212ENST00000531625 MAPKAPK5Q8IW41 473 aa23.33■■□□□ 1.33
UBXN1-212ENST00000531625 TRMT44Q8IYL2 757 aaKnown RBP23.33■■□□□ 1.33
UBXN1-212ENST00000531625 C7orf61Q8IZ16 206 aa23.33■■□□□ 1.33
UBXN1-212ENST00000531625 LRCH3Q96II8 777 aa23.33■■□□□ 1.33
UBXN1-212ENST00000531625 ZNF512BQ96KM6 892 aaPredicted RBP23.33■■□□□ 1.33
UBXN1-212ENST00000531625 C11orf49Q9H6J7 331 aa23.33■■□□□ 1.33
UBXN1-212ENST00000531625 TXNRD2Q9NNW7 524 aa23.33■■□□□ 1.33
UBXN1-212ENST00000531625 MAST2Q6P0Q8 1798 aa23.32■■□□□ 1.32
UBXN1-212ENST00000531625 CYP2B6P20813 491 aa23.32■■□□□ 1.32
UBXN1-212ENST00000531625 MAPK4P31152 587 aa23.32■■□□□ 1.32
UBXN1-212ENST00000531625 POLA2Q14181 598 aa23.32■■□□□ 1.32
UBXN1-212ENST00000531625 TNNI3KQ59H18 835 aa23.32■■□□□ 1.32
UBXN1-212ENST00000531625 GPR153Q6NV75 609 aa23.32■■□□□ 1.32
UBXN1-212ENST00000531625 ADGRA1Q86SQ6 560 aa23.32■■□□□ 1.32
UBXN1-212ENST00000531625 CRACR2BQ8N4Y2 399 aaPredicted RBP23.32■■□□□ 1.32
UBXN1-212ENST00000531625 GTF3C2Q8WUA4 911 aaPredicted RBP23.32■■□□□ 1.32
UBXN1-212ENST00000531625 RBPJLQ9UBG7 517 aa23.32■■□□□ 1.32
UBXN1-212ENST00000531625 RCAN3Q9UKA8 241 aa23.32■■□□□ 1.32
UBXN1-212ENST00000531625 FPGT-TNNI3KV9GXZ4 949 aa23.32■■□□□ 1.32
UBXN1-212ENST00000531625 CDK5RAP2Q96SN8 1893 aa23.31■■□□□ 1.32
UBXN1-212ENST00000531625 CYP2E1P05181 493 aaPredicted RBP23.31■■□□□ 1.32
UBXN1-212ENST00000531625 PRKAR2AP13861 404 aaKnown RBP23.31■■□□□ 1.32
UBXN1-212ENST00000531625 USP6NLQ92738 828 aa23.31■■□□□ 1.32
UBXN1-212ENST00000531625 DBNDD2Q9BQY9 259 aa23.31■■□□□ 1.32
UBXN1-212ENST00000531625 TRIM34Q9BYJ4 488 aa23.31■■□□□ 1.32
UBXN1-212ENST00000531625 PALD1Q9ULE6 856 aa23.31■■□□□ 1.32
UBXN1-212ENST00000531625 ZBTB21Q9ULJ3 1066 aa23.31■■□□□ 1.32
UBXN1-212ENST00000531625 ZMYND8Q9ULU4 1186 aaPredicted RBP23.31■■□□□ 1.32
UBXN1-212ENST00000531625 TNNQ9UQP3 1299 aa23.31■■□□□ 1.32
UBXN1-212ENST00000531625 FOCADQ5VW36 1801 aa23.31■■□□□ 1.32
UBXN1-212ENST00000531625 PDE3AQ14432 1141 aa23.3■■□□□ 1.32
UBXN1-212ENST00000531625 SLC17A8Q8NDX2 589 aa23.3■■□□□ 1.32
UBXN1-212ENST00000531625 DDX60LQ5H9U9 1706 aaKnown RBP23.3■■□□□ 1.32
UBXN1-212ENST00000531625 PEX10O60683 326 aa23.29■■□□□ 1.32
UBXN1-212ENST00000531625 GDF11O95390 407 aa23.29■■□□□ 1.32
UBXN1-212ENST00000531625 ERVK-9P63128 1117 aa23.29■■□□□ 1.32
UBXN1-212ENST00000531625 ERVK-24P63145 666 aa23.29■■□□□ 1.32
UBXN1-212ENST00000531625 SHROOM1Q2M3G4 852 aaPredicted RBP23.29■■□□□ 1.32
UBXN1-212ENST00000531625 SSH3Q8TE77 659 aa23.29■■□□□ 1.32
UBXN1-212ENST00000531625 FRAT1Q92837 279 aaPredicted RBP23.29■■□□□ 1.32
UBXN1-212ENST00000531625 HLA-DOAP06340 250 aa23.28■■□□□ 1.32
UBXN1-212ENST00000531625 ZKSCAN1P17029 563 aaPredicted RBP23.28■■□□□ 1.32
UBXN1-212ENST00000531625 Q3C1V9 767 aa23.28■■□□□ 1.32
UBXN1-212ENST00000531625 MORN1Q5T089 497 aa23.28■■□□□ 1.32
UBXN1-212ENST00000531625 CLUAP1Q96AJ1 413 aa23.28■■□□□ 1.32
UBXN1-212ENST00000531625 EMILIN3Q9NT22 766 aa23.28■■□□□ 1.32
UBXN1-212ENST00000531625 RGS2P41220 211 aa23.27■■□□□ 1.32
UBXN1-212ENST00000531625 ZAP70P43403 619 aa23.27■■□□□ 1.32
UBXN1-212ENST00000531625 ATP8B2P98198 1209 aa23.27■■□□□ 1.32
UBXN1-212ENST00000531625 CACNB2Q08289 660 aaPredicted RBP23.27■■□□□ 1.32
UBXN1-212ENST00000531625 OS9Q13438 667 aaPredicted RBP23.27■■□□□ 1.32
UBXN1-212ENST00000531625 LRIT3Q3SXY7 679 aa23.27■■□□□ 1.32
UBXN1-212ENST00000531625 USP17L2Q6R6M4 530 aa23.27■■□□□ 1.32
UBXN1-212ENST00000531625 GPR142Q7Z601 462 aa23.27■■□□□ 1.32
UBXN1-212ENST00000531625 PORCNQ9H237 461 aa23.27■■□□□ 1.32
UBXN1-212ENST00000531625 PFASO15067 1338 aa23.27■■□□□ 1.32
UBXN1-212ENST00000531625 DNAH12Q6ZR08 3092 aa23.27■■□□□ 1.31
UBXN1-212ENST00000531625 MYO5AQ9Y4I1 1855 aaKnown RBP23.26■■□□□ 1.31
UBXN1-212ENST00000531625 COL6A1P12109 1028 aa23.26■■□□□ 1.31
UBXN1-212ENST00000531625 MAGEA10P43363 369 aaPredicted RBP23.26■■□□□ 1.31
UBXN1-212ENST00000531625 POTEEQ6S8J3 1075 aa23.26■■□□□ 1.31
UBXN1-212ENST00000531625 PLEKHH3Q7Z736 793 aa23.26■■□□□ 1.31
UBXN1-212ENST00000531625 CERS3Q8IU89 383 aa23.26■■□□□ 1.31
UBXN1-212ENST00000531625 CCAR1Q8IX12 1150 aaKnown RBP23.26■■□□□ 1.31
UBXN1-212ENST00000531625 TMEM57Q8N5G2 664 aa23.26■■□□□ 1.31
UBXN1-212ENST00000531625 C12orf42Q96LP6 360 aa23.26■■□□□ 1.31
UBXN1-212ENST00000531625 PIH1D3Q9NQM4 214 aaKnown RBP23.26■■□□□ 1.31
UBXN1-212ENST00000531625 SAP30BPQ9UHR5 308 aaKnown RBP23.26■■□□□ 1.31
UBXN1-212ENST00000531625 SYN1P17600 705 aa23.25■■□□□ 1.31
UBXN1-212ENST00000531625 DYNLL1P63167 89 aaKnown RBP23.25■■□□□ 1.31
UBXN1-212ENST00000531625 LHX8Q68G74 356 aa23.25■■□□□ 1.31
UBXN1-212ENST00000531625 TATDN1Q6P1N9 297 aa23.25■■□□□ 1.31
UBXN1-212ENST00000531625 APBA2Q99767 749 aa23.25■■□□□ 1.31
UBXN1-212ENST00000531625 NOP58Q9Y2X3 529 aaKnown RBP23.25■■□□□ 1.31
UBXN1-212ENST00000531625 RABGAP1Q9Y3P9 1069 aa23.25■■□□□ 1.31
UBXN1-212ENST00000531625 SURF6O75683 361 aaKnown RBP23.24■■□□□ 1.31
UBXN1-212ENST00000531625 GH2P01242 217 aa23.24■■□□□ 1.31
UBXN1-212ENST00000531625 TDHQ8IZJ6 230 aa23.24■■□□□ 1.31
UBXN1-212ENST00000531625 PAGR1Q9BTK6 254 aa23.24■■□□□ 1.31
UBXN1-212ENST00000531625 DBNLQ9UJU6 430 aaKnown RBP23.24■■□□□ 1.31
UBXN1-212ENST00000531625 DLL1O00548 723 aa23.23■■□□□ 1.31
UBXN1-212ENST00000531625 CYP7A1P22680 504 aa23.23■■□□□ 1.31
UBXN1-212ENST00000531625 CCL14Q16627 93 aa23.23■■□□□ 1.31
UBXN1-212ENST00000531625 ZKSCAN2Q63HK3 967 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms