RNA–Protein interactions for RNA: ENST00000531542.1

AMBRA1-210, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-210ENST00000531542 RNF208Q9H0X6 261 aa16.23■□□□□ 0.19
AMBRA1-210ENST00000531542 TMOD4Q9NZQ9 345 aa16.23■□□□□ 0.19
AMBRA1-210ENST00000531542 BIN2Q9UBW5 565 aaPredicted RBP16.23■□□□□ 0.19
AMBRA1-210ENST00000531542 USP17L10C9JJH3 530 aa16.22■□□□□ 0.19
AMBRA1-210ENST00000531542 ECM2O94769 699 aaPredicted RBP16.22■□□□□ 0.19
AMBRA1-210ENST00000531542 DYNLL1P63167 89 aaKnown RBP16.22■□□□□ 0.19
AMBRA1-210ENST00000531542 MTMR2Q13614 643 aa16.22■□□□□ 0.19
AMBRA1-210ENST00000531542 HABP4Q5JVS0 413 aaKnown RBP16.22■□□□□ 0.19
AMBRA1-210ENST00000531542 CLASRPQ8N2M8 674 aaKnown RBP16.22■□□□□ 0.19
AMBRA1-210ENST00000531542 MAGEB6Q8N7X4 407 aa16.22■□□□□ 0.19
AMBRA1-210ENST00000531542 KIF1BPQ96EK5 621 aa16.22■□□□□ 0.19
AMBRA1-210ENST00000531542 ANTXR1Q9H6X2 564 aa16.22■□□□□ 0.19
AMBRA1-210ENST00000531542 TAOK2Q9UL54 1235 aa16.22■□□□□ 0.19
AMBRA1-210ENST00000531542 ZBTB21Q9ULJ3 1066 aa16.22■□□□□ 0.19
AMBRA1-210ENST00000531542 LOC285556D6RIA3 1793 aa16.22■□□□□ 0.19
AMBRA1-210ENST00000531542 RAB11FIP3O75154 756 aa16.21■□□□□ 0.19
AMBRA1-210ENST00000531542 SGPL1O95470 568 aa16.21■□□□□ 0.19
AMBRA1-210ENST00000531542 TTC6Q86TZ1 520 aa16.21■□□□□ 0.19
AMBRA1-210ENST00000531542 U2AF1L4Q8WU68 220 aaKnown RBP16.21■□□□□ 0.19
AMBRA1-210ENST00000531542 GTF3C2Q8WUA4 911 aaPredicted RBP16.21■□□□□ 0.19
AMBRA1-210ENST00000531542 RIOK1Q9BRS2 568 aaKnown RBP16.21■□□□□ 0.19
AMBRA1-210ENST00000531542 PAK6Q9NQU5 681 aaPredicted RBP16.21■□□□□ 0.19
AMBRA1-210ENST00000531542 SERPINB13Q9UIV8 391 aa16.21■□□□□ 0.19
AMBRA1-210ENST00000531542 GJD2Q9UKL4 321 aa16.21■□□□□ 0.19
AMBRA1-210ENST00000531542 SIPA1L1O43166 1804 aa16.21■□□□□ 0.19
AMBRA1-210ENST00000531542 INHAP05111 366 aa16.2■□□□□ 0.18
AMBRA1-210ENST00000531542 USP5P45974 858 aa16.2■□□□□ 0.18
AMBRA1-210ENST00000531542 IRX3P78415 501 aaPredicted RBP16.2■□□□□ 0.18
AMBRA1-210ENST00000531542 SIRT2Q8IXJ6 389 aa16.2■□□□□ 0.18
AMBRA1-210ENST00000531542 MIGA1Q8NAN2 632 aa16.2■□□□□ 0.18
AMBRA1-210ENST00000531542 UNC93B1Q9H1C4 597 aa16.2■□□□□ 0.18
AMBRA1-210ENST00000531542 SAP30BPQ9UHR5 308 aaKnown RBP16.2■□□□□ 0.18
AMBRA1-210ENST00000531542 FOCADQ5VW36 1801 aa16.19■□□□□ 0.18
AMBRA1-210ENST00000531542 ELNP15502 786 aa16.19■□□□□ 0.18
AMBRA1-210ENST00000531542 C12orf42Q96LP6 360 aa16.19■□□□□ 0.18
AMBRA1-210ENST00000531542 P2RX7Q99572 595 aaKnown RBP16.19■□□□□ 0.18
AMBRA1-210ENST00000531542 HTATIP2Q9BUP3 242 aa16.19■□□□□ 0.18
AMBRA1-210ENST00000531542 IL1RAPL2Q9NP60 686 aa16.19■□□□□ 0.18
AMBRA1-210ENST00000531542 MGAMO43451 1857 aa16.18■□□□□ 0.18
AMBRA1-210ENST00000531542 GDF11O95390 407 aa16.18■□□□□ 0.18
AMBRA1-210ENST00000531542 GH2P01242 217 aa16.18■□□□□ 0.18
AMBRA1-210ENST00000531542 HERVK_113P62684 666 aa16.18■□□□□ 0.18
AMBRA1-210ENST00000531542 SLC9C2Q5TAH2 1124 aa16.18■□□□□ 0.18
AMBRA1-210ENST00000531542 USP17L2Q6R6M4 530 aa16.18■□□□□ 0.18
AMBRA1-210ENST00000531542 GPRC5AQ8NFJ5 357 aa16.18■□□□□ 0.18
AMBRA1-210ENST00000531542 KIAA1683Q9H0B3 1180 aa16.18■□□□□ 0.18
AMBRA1-210ENST00000531542 CRISPLD2Q9H0B8 497 aa16.18■□□□□ 0.18
AMBRA1-210ENST00000531542 EMILIN3Q9NT22 766 aa16.18■□□□□ 0.18
AMBRA1-210ENST00000531542 COG6Q9Y2V7 657 aa16.18■□□□□ 0.18
AMBRA1-210ENST00000531542 NDUFB9Q9Y6M9 179 aa16.18■□□□□ 0.18
AMBRA1-210ENST00000531542 CEP290O15078 2479 aa16.17■□□□□ 0.18
AMBRA1-210ENST00000531542 HMGCRP04035 888 aa16.17■□□□□ 0.18
AMBRA1-210ENST00000531542 IFIT2P09913 472 aaKnown RBP16.17■□□□□ 0.18
AMBRA1-210ENST00000531542 XRCC5P13010 732 aaKnown RBP16.17■□□□□ 0.18
AMBRA1-210ENST00000531542 PDE6AP16499 860 aa16.17■□□□□ 0.18
AMBRA1-210ENST00000531542 USP14P54578 494 aa16.17■□□□□ 0.18
AMBRA1-210ENST00000531542 PDE3AQ14432 1141 aa16.17■□□□□ 0.18
AMBRA1-210ENST00000531542 RBPJLQ9UBG7 517 aa16.17■□□□□ 0.18
AMBRA1-210ENST00000531542 RCAN3Q9UKA8 241 aa16.17■□□□□ 0.18
AMBRA1-210ENST00000531542 MAGEB6P1A0A0J9YX57 407 aa16.16■□□□□ 0.18
AMBRA1-210ENST00000531542 TCRBV5S4A2TA0A5A2 114 aa16.16■□□□□ 0.18
AMBRA1-210ENST00000531542 H0YGN5 161 aa16.16■□□□□ 0.18
AMBRA1-210ENST00000531542 MAPK4P31152 587 aa16.16■□□□□ 0.18
AMBRA1-210ENST00000531542 GABPAQ06546 454 aa16.16■□□□□ 0.18
AMBRA1-210ENST00000531542 SHROOM1Q2M3G4 852 aaPredicted RBP16.16■□□□□ 0.18
AMBRA1-210ENST00000531542 CERKLQ49MI3 558 aaPredicted RBP16.16■□□□□ 0.18
AMBRA1-210ENST00000531542 SOCS4Q8WXH5 440 aa16.16■□□□□ 0.18
AMBRA1-210ENST00000531542 CRNKL1Q9BZJ0 848 aaKnown RBP16.16■□□□□ 0.18
AMBRA1-210ENST00000531542 TXNRD2Q9NNW7 524 aa16.16■□□□□ 0.18
AMBRA1-210ENST00000531542 ATAD5Q96QE3 1844 aa16.16■□□□□ 0.18
AMBRA1-210ENST00000531542 CDK5RAP2Q96SN8 1893 aa16.16■□□□□ 0.18
AMBRA1-210ENST00000531542 FARP2O94887 1054 aaPredicted RBP16.15■□□□□ 0.18
AMBRA1-210ENST00000531542 ATP5JP18859 108 aa16.15■□□□□ 0.18
AMBRA1-210ENST00000531542 SHMT1P34896 483 aa16.15■□□□□ 0.18
AMBRA1-210ENST00000531542 ABCB5Q2M3G0 1257 aa16.15■□□□□ 0.18
AMBRA1-210ENST00000531542 LBX2Q6XYB7 198 aa16.15■□□□□ 0.18
AMBRA1-210ENST00000531542 TRMT44Q8IYL2 757 aaKnown RBP16.15■□□□□ 0.18
AMBRA1-210ENST00000531542 ANKLE1Q8NAG6 615 aa16.15■□□□□ 0.18
AMBRA1-210ENST00000531542 RPTORQ8N122 1335 aa16.15■□□□□ 0.18
AMBRA1-210ENST00000531542 MYO5AQ9Y4I1 1855 aaKnown RBP16.14■□□□□ 0.17
AMBRA1-210ENST00000531542 USP17L15C9J2P7 530 aa16.14■□□□□ 0.17
AMBRA1-210ENST00000531542 USP17L13C9JLJ4 530 aa16.14■□□□□ 0.17
AMBRA1-210ENST00000531542 USP17L11C9JVI0 530 aa16.14■□□□□ 0.17
AMBRA1-210ENST00000531542 USP17L18D6R9N7 530 aa16.14■□□□□ 0.17
AMBRA1-210ENST00000531542 USP17L22D6RA61 530 aa16.14■□□□□ 0.17
AMBRA1-210ENST00000531542 USP17L17D6RBQ6 530 aa16.14■□□□□ 0.17
AMBRA1-210ENST00000531542 USP17L19D6RCP7 530 aa16.14■□□□□ 0.17
AMBRA1-210ENST00000531542 USP17L20D6RJB6 530 aa16.14■□□□□ 0.17
AMBRA1-210ENST00000531542 TFRCP02786 760 aaKnown RBP16.14■□□□□ 0.17
AMBRA1-210ENST00000531542 PLCD1P51178 756 aa16.14■□□□□ 0.17
AMBRA1-210ENST00000531542 ERVK-9P63128 1117 aa16.14■□□□□ 0.17
AMBRA1-210ENST00000531542 ERVK-24P63145 666 aa16.14■□□□□ 0.17
AMBRA1-210ENST00000531542 USP17L24Q0WX57 530 aa16.14■□□□□ 0.17
AMBRA1-210ENST00000531542 MAP3K21Q5TCX8 1036 aa16.14■□□□□ 0.17
AMBRA1-210ENST00000531542 POTEEQ6S8J3 1075 aa16.14■□□□□ 0.17
AMBRA1-210ENST00000531542 USP6NLQ92738 828 aa16.14■□□□□ 0.17
AMBRA1-210ENST00000531542 DPF3Q92784 378 aa16.14■□□□□ 0.17
AMBRA1-210ENST00000531542 DEFB118Q96PH6 123 aa16.14■□□□□ 0.17
AMBRA1-210ENST00000531542 NUDT12Q9BQG2 462 aa16.14■□□□□ 0.17
AMBRA1-210ENST00000531542 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.14■□□□□ 0.172e-6■□□□□ 10.1
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms