RNA–Protein interactions for RNA: ENST00000531525.2

ATM-216, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-216ENST00000531525 PNMA5Q96PV4 448 aa8.14□□□□□ -1.11
ATM-216ENST00000531525 ST7Q9NRC1 585 aa8.14□□□□□ -1.11
ATM-216ENST00000531525 JCADQ9P266 1359 aa8.14□□□□□ -1.11
ATM-216ENST00000531525 SASH3O75995 380 aa8.13□□□□□ -1.11
ATM-216ENST00000531525 AMPD1P23109 780 aa8.13□□□□□ -1.11
ATM-216ENST00000531525 GNALP38405 381 aa8.13□□□□□ -1.11
ATM-216ENST00000531525 DGKGP49619 791 aa8.13□□□□□ -1.11
ATM-216ENST00000531525 EXOSC10Q01780 885 aaKnown RBP8.13□□□□□ -1.11
ATM-216ENST00000531525 AXDND1Q5T1B0 1012 aaPredicted RBP8.13□□□□□ -1.11
ATM-216ENST00000531525 CCSAPQ6IQ19 270 aaPredicted RBP8.13□□□□□ -1.11
ATM-216ENST00000531525 KRT25Q7Z3Z0 450 aa8.13□□□□□ -1.11
ATM-216ENST00000531525 LRP10Q7Z4F1 713 aa8.13□□□□□ -1.11
ATM-216ENST00000531525 SCARF2Q96GP6 870 aaPredicted RBP8.13□□□□□ -1.11
ATM-216ENST00000531525 FEZ1Q99689 392 aa8.13□□□□□ -1.11
ATM-216ENST00000531525 DNAJC25Q9H1X3 360 aa8.13□□□□□ -1.11
ATM-216ENST00000531525 ADAMTS1Q9UHI8 967 aa8.13□□□□□ -1.11
ATM-216ENST00000531525 LEMD3Q9Y2U8 911 aa8.13□□□□□ -1.11
ATM-216ENST00000531525 AHDC1Q5TGY3 1603 aaPredicted RBP8.13□□□□□ -1.11
ATM-216ENST00000531525 PTPN23Q9H3S7 1636 aa8.13□□□□□ -1.11
ATM-216ENST00000531525 MSH6P52701 1360 aa8.13□□□□□ -1.11
ATM-216ENST00000531525 XYLBO75191 536 aa8.13□□□□□ -1.11
ATM-216ENST00000531525 LDHAP00338 332 aaKnown RBP8.13□□□□□ -1.11
ATM-216ENST00000531525 KCNA6P17658 529 aa8.13□□□□□ -1.11
ATM-216ENST00000531525 ADH7P40394 386 aa8.13□□□□□ -1.11
ATM-216ENST00000531525 KCNMA1Q12791 1236 aa8.13□□□□□ -1.11
ATM-216ENST00000531525 SYCP2LQ5T4T6 812 aa8.13□□□□□ -1.11
ATM-216ENST00000531525 LINC00114Q6XXX2 140 aa8.13□□□□□ -1.11
ATM-216ENST00000531525 PNISRQ8TF01 805 aaKnown RBP8.13□□□□□ -1.11
ATM-216ENST00000531525 BSDC1Q9NW68 430 aaPredicted RBP8.13□□□□□ -1.11
ATM-216ENST00000531525 FAM8A1Q9UBU6 413 aa8.13□□□□□ -1.11
ATM-216ENST00000531525 PRKAG3Q9UGI9 489 aa8.13□□□□□ -1.11
ATM-216ENST00000531525 VPS8Q8N3P4 1428 aa8.12□□□□□ -1.11
ATM-216ENST00000531525 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.12□□□□□ -1.11
ATM-216ENST00000531525 GIPC1O14908 333 aa8.12□□□□□ -1.11
ATM-216ENST00000531525 CAND2O75155 1236 aa8.12□□□□□ -1.11
ATM-216ENST00000531525 KRT18P05783 430 aaKnown RBP8.12□□□□□ -1.11
ATM-216ENST00000531525 SQSTM1Q13501 440 aa8.12□□□□□ -1.11
ATM-216ENST00000531525 HDAC1Q13547 482 aaPredicted RBP8.12□□□□□ -1.11
ATM-216ENST00000531525 GPR152Q8TDT2 470 aa8.12□□□□□ -1.11
ATM-216ENST00000531525 IL17RAQ96F46 866 aa8.12□□□□□ -1.11
ATM-216ENST00000531525 RRAGCQ9HB90 399 aa8.12□□□□□ -1.11
ATM-216ENST00000531525 TMEM260Q9NX78 707 aa8.12□□□□□ -1.11
ATM-216ENST00000531525 STRIP2Q9ULQ0 834 aa8.12□□□□□ -1.11
ATM-216ENST00000531525 STARD13Q9Y3M8 1113 aa8.12□□□□□ -1.11
ATM-216ENST00000531525 NOS1P29475 1434 aa8.12□□□□□ -1.11
ATM-216ENST00000531525 FGD6Q6ZV73 1430 aa8.12□□□□□ -1.11
ATM-216ENST00000531525 SMAD7O15105 426 aaKnown RBP8.11□□□□□ -1.11
ATM-216ENST00000531525 MAP3K6O95382 1288 aa8.11□□□□□ -1.11
ATM-216ENST00000531525 RARAP10276 462 aa8.11□□□□□ -1.11
ATM-216ENST00000531525 PTMSP20962 102 aa8.11□□□□□ -1.11
ATM-216ENST00000531525 ALAS2P22557 587 aa8.11□□□□□ -1.11
ATM-216ENST00000531525 C21orf62-AS1Q17RA5 79 aa8.11□□□□□ -1.11
ATM-216ENST00000531525 USPL1Q5W0Q7 1092 aa8.11□□□□□ -1.11
ATM-216ENST00000531525 RELL1Q8IUW5 271 aa8.11□□□□□ -1.11
ATM-216ENST00000531525 BEND7Q8N7W2 519 aaPredicted RBP8.11□□□□□ -1.11
ATM-216ENST00000531525 GPATCH11Q8N954 259 aa8.11□□□□□ -1.11
ATM-216ENST00000531525 NUDT16Q96DE0 195 aaKnown RBP8.11□□□□□ -1.11
ATM-216ENST00000531525 EAF1Q96JC9 268 aaPredicted RBP8.11□□□□□ -1.11
ATM-216ENST00000531525 FAM126AQ9BYI3 521 aaPredicted RBP8.11□□□□□ -1.11
ATM-216ENST00000531525 UBE2OQ9C0C9 1292 aaKnown RBP8.11□□□□□ -1.11
ATM-216ENST00000531525 CCDC113Q9H0I3 377 aa8.11□□□□□ -1.11
ATM-216ENST00000531525 GGNBP2Q9H3C7 697 aa8.11□□□□□ -1.11
ATM-216ENST00000531525 FAM13BQ9NYF5 915 aa8.11□□□□□ -1.11
ATM-216ENST00000531525 SFMBT1Q9UHJ3 866 aa8.11□□□□□ -1.11
ATM-216ENST00000531525 ATP8A1Q9Y2Q0 1164 aa8.11□□□□□ -1.11
ATM-216ENST00000531525 ABCC5O15440 1437 aa8.11□□□□□ -1.11
ATM-216ENST00000531525 ZFYVE9O95405 1425 aa8.11□□□□□ -1.11
ATM-216ENST00000531525 DIP2AQ14689 1571 aa8.11□□□□□ -1.11
ATM-216ENST00000531525 TMEM131LA2VDJ0 1609 aa8.1□□□□□ -1.11
ATM-216ENST00000531525 RNF225M0QZC1 329 aaPredicted RBP8.1□□□□□ -1.11
ATM-216ENST00000531525 BRD3Q15059 726 aa8.1□□□□□ -1.11
ATM-216ENST00000531525 CELF2-AS1Q8N7Q2 184 aa8.1□□□□□ -1.11
ATM-216ENST00000531525 CCDC74AQ96AQ1 378 aa8.1□□□□□ -1.11
ATM-216ENST00000531525 APBA2Q99767 749 aa8.1□□□□□ -1.11
ATM-216ENST00000531525 IGFLR1Q9H665 355 aa8.1□□□□□ -1.11
ATM-216ENST00000531525 DNAJB12Q9NXW2 375 aaKnown RBP8.1□□□□□ -1.11
ATM-216ENST00000531525 KANK1Q14678 1352 aa8.1□□□□□ -1.11
ATM-216ENST00000531525 RPRD2Q5VT52 1461 aaKnown RBP8.09□□□□□ -1.11
ATM-216ENST00000531525 DAPK1P53355 1430 aa8.09□□□□□ -1.11
ATM-216ENST00000531525 ZBTB42B2RXF5 422 aa8.09□□□□□ -1.11
ATM-216ENST00000531525 GBP2P32456 591 aaPredicted RBP8.09□□□□□ -1.11
ATM-216ENST00000531525 TBC1D8BQ0IIM8 1120 aa8.09□□□□□ -1.11
ATM-216ENST00000531525 PPP2R5AQ15172 486 aa8.09□□□□□ -1.11
ATM-216ENST00000531525 NXPE4Q6UWF7 544 aa8.09□□□□□ -1.11
ATM-216ENST00000531525 CLEC4GQ6UXB4 293 aa8.09□□□□□ -1.11
ATM-216ENST00000531525 DHX32Q7L7V1 743 aaKnown RBP8.09□□□□□ -1.11
ATM-216ENST00000531525 KRT26Q7Z3Y9 468 aa8.09□□□□□ -1.11
ATM-216ENST00000531525 PODNQ7Z5L7 613 aa8.09□□□□□ -1.11
ATM-216ENST00000531525 SLC26A8Q96RN1 970 aa8.09□□□□□ -1.11
ATM-216ENST00000531525 TMX4Q9H1E5 349 aaPredicted RBP8.09□□□□□ -1.11
ATM-216ENST00000531525 MKL2Q9ULH7 1088 aa8.09□□□□□ -1.11
ATM-216ENST00000531525 SLC6A14Q9UN76 642 aa8.09□□□□□ -1.11
ATM-216ENST00000531525 CDK12Q9NYV4 1490 aaPredicted RBP8.09□□□□□ -1.11
ATM-216ENST00000531525 PLEKHG1Q9ULL1 1385 aa8.09□□□□□ -1.12
ATM-216ENST00000531525 SPATA31A6Q5VVP1 1343 aa8.09□□□□□ -1.12
ATM-216ENST00000531525 TSPAN6O43657 245 aa8.08□□□□□ -1.12
ATM-216ENST00000531525 ALDH1L1O75891 902 aa8.08□□□□□ -1.12
ATM-216ENST00000531525 TRIM37O94972 964 aa8.08□□□□□ -1.12
ATM-216ENST00000531525 KIF4AO95239 1232 aa8.08□□□□□ -1.12
ATM-216ENST00000531525 ALBP02768 609 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms