RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 HERC5Q9UII4 1024 aaKnown RBP11.37□□□□□ -0.59
NEDD8-206ENST00000531430 CUL9Q8IWT3 2517 aa11.37□□□□□ -0.59
NEDD8-206ENST00000531430 ZNF521Q96K83 1311 aa11.36□□□□□ -0.59
NEDD8-206ENST00000531430 DOCK1Q14185 1865 aa11.36□□□□□ -0.59
NEDD8-206ENST00000531430 ZNF316A6NFI3 1004 aaPredicted RBP11.36□□□□□ -0.59
NEDD8-206ENST00000531430 C19orf81C9J6K1 198 aa11.36□□□□□ -0.59
NEDD8-206ENST00000531430 NPM3O75607 178 aaKnown RBP11.36□□□□□ -0.59
NEDD8-206ENST00000531430 MAP4K4O95819 1239 aaPredicted RBP11.36□□□□□ -0.59
NEDD8-206ENST00000531430 ASNSP08243 561 aa11.36□□□□□ -0.59
NEDD8-206ENST00000531430 MAPK4P31152 587 aa11.36□□□□□ -0.59
NEDD8-206ENST00000531430 RGS2P41220 211 aa11.36□□□□□ -0.59
NEDD8-206ENST00000531430 ATN1P54259 1190 aaPredicted RBP11.36□□□□□ -0.59
NEDD8-206ENST00000531430 LRRC26Q2I0M4 334 aa11.36□□□□□ -0.59
NEDD8-206ENST00000531430 SHROOM1Q2M3G4 852 aaPredicted RBP11.36□□□□□ -0.59
NEDD8-206ENST00000531430 TTC39AQ5SRH9 613 aa11.36□□□□□ -0.59
NEDD8-206ENST00000531430 FOXP4Q8IVH2 680 aaPredicted RBP11.36□□□□□ -0.59
NEDD8-206ENST00000531430 SOCS4Q8WXH5 440 aa11.36□□□□□ -0.59
NEDD8-206ENST00000531430 EDC3Q96F86 508 aaKnown RBP11.36□□□□□ -0.59
NEDD8-206ENST00000531430 WDR18Q9BV38 432 aa11.36□□□□□ -0.59
NEDD8-206ENST00000531430 PORCNQ9H237 461 aa11.36□□□□□ -0.59
NEDD8-206ENST00000531430 DHX36Q9H2U1 1008 aaKnown RBP11.36□□□□□ -0.59
NEDD8-206ENST00000531430 PALD1Q9ULE6 856 aa11.36□□□□□ -0.59
NEDD8-206ENST00000531430 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.36□□□□□ -0.59
NEDD8-206ENST00000531430 PFASO15067 1338 aa11.35□□□□□ -0.59
NEDD8-206ENST00000531430 PHIPQ8WWQ0 1821 aa11.35□□□□□ -0.59
NEDD8-206ENST00000531430 ALPK3Q96L96 1907 aa11.35□□□□□ -0.59
NEDD8-206ENST00000531430 GNAI3P08754 354 aa11.35□□□□□ -0.59
NEDD8-206ENST00000531430 UQCRFS1P1P0C7P4 283 aa11.35□□□□□ -0.59
NEDD8-206ENST00000531430 XRCC5P13010 732 aaKnown RBP11.35□□□□□ -0.59
NEDD8-206ENST00000531430 HOXA7P31268 230 aaPredicted RBP11.35□□□□□ -0.59
NEDD8-206ENST00000531430 ERVK-9P63128 1117 aa11.35□□□□□ -0.59
NEDD8-206ENST00000531430 ERVK-24P63145 666 aa11.35□□□□□ -0.59
NEDD8-206ENST00000531430 JAG1P78504 1218 aa11.35□□□□□ -0.59
NEDD8-206ENST00000531430 OS9Q13438 667 aaPredicted RBP11.35□□□□□ -0.59
NEDD8-206ENST00000531430 MFSD14CQ5VZR4 134 aa11.35□□□□□ -0.59
NEDD8-206ENST00000531430 GPR142Q7Z601 462 aa11.35□□□□□ -0.59
NEDD8-206ENST00000531430 TRMT44Q8IYL2 757 aaKnown RBP11.35□□□□□ -0.59
NEDD8-206ENST00000531430 FEZ1Q99689 392 aa11.35□□□□□ -0.59
NEDD8-206ENST00000531430 PRKAG2Q9UGJ0 569 aa11.35□□□□□ -0.59
NEDD8-206ENST00000531430 RFX7Q2KHR2 1363 aa11.35□□□□□ -0.59
NEDD8-206ENST00000531430 PTPRFP10586 1907 aa11.35□□□□□ -0.59
NEDD8-206ENST00000531430 PDS5AQ29RF7 1337 aaKnown RBP11.35□□□□□ -0.59
NEDD8-206ENST00000531430 GLRX3O76003 335 aaKnown RBP11.34□□□□□ -0.59
NEDD8-206ENST00000531430 HLA-DOAP06340 250 aa11.34□□□□□ -0.59
NEDD8-206ENST00000531430 PLCG2P16885 1265 aa11.34□□□□□ -0.59
NEDD8-206ENST00000531430 MCAMP43121 646 aa11.34□□□□□ -0.59
NEDD8-206ENST00000531430 ATP2B2Q01814 1243 aa11.34□□□□□ -0.59
NEDD8-206ENST00000531430 CCDC158Q5M9N0 1113 aa11.34□□□□□ -0.59
NEDD8-206ENST00000531430 MAP3K21Q5TCX8 1036 aa11.34□□□□□ -0.59
NEDD8-206ENST00000531430 LHX8Q68G74 356 aa11.34□□□□□ -0.59
NEDD8-206ENST00000531430 USP17L2Q6R6M4 530 aa11.34□□□□□ -0.59
NEDD8-206ENST00000531430 COL25A1Q9BXS0 654 aaPredicted RBP11.34□□□□□ -0.59
NEDD8-206ENST00000531430 LAMA3Q16787 3333 aa11.34□□□□□ -0.59
NEDD8-206ENST00000531430 GH2P01242 217 aa11.33□□□□□ -0.6
NEDD8-206ENST00000531430 DYNLL1P63167 89 aaKnown RBP11.33□□□□□ -0.6
NEDD8-206ENST00000531430 RAB3GAP1Q15042 981 aa11.33□□□□□ -0.6
NEDD8-206ENST00000531430 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.33□□□□□ -0.6
NEDD8-206ENST00000531430 FRAT1Q92837 279 aaPredicted RBP11.33□□□□□ -0.6
NEDD8-206ENST00000531430 EMILIN3Q9NT22 766 aa11.33□□□□□ -0.6
NEDD8-206ENST00000531430 ZBTB21Q9ULJ3 1066 aa11.33□□□□□ -0.6
NEDD8-206ENST00000531430 ATP11BQ9Y2G3 1177 aa11.33□□□□□ -0.6
NEDD8-206ENST00000531430 DDX60LQ5H9U9 1706 aaKnown RBP11.32□□□□□ -0.6
NEDD8-206ENST00000531430 USP17L15C9J2P7 530 aa11.32□□□□□ -0.6
NEDD8-206ENST00000531430 USP17L13C9JLJ4 530 aa11.32□□□□□ -0.6
NEDD8-206ENST00000531430 USP17L11C9JVI0 530 aa11.32□□□□□ -0.6
NEDD8-206ENST00000531430 USP17L18D6R9N7 530 aa11.32□□□□□ -0.6
NEDD8-206ENST00000531430 USP17L22D6RA61 530 aa11.32□□□□□ -0.6
NEDD8-206ENST00000531430 USP17L17D6RBQ6 530 aa11.32□□□□□ -0.6
NEDD8-206ENST00000531430 USP17L19D6RCP7 530 aa11.32□□□□□ -0.6
NEDD8-206ENST00000531430 USP17L20D6RJB6 530 aa11.32□□□□□ -0.6
NEDD8-206ENST00000531430 GNAI2P04899 355 aa11.32□□□□□ -0.6
NEDD8-206ENST00000531430 COL6A1P12109 1028 aa11.32□□□□□ -0.6
NEDD8-206ENST00000531430 ARID4AP29374 1257 aaPredicted RBP11.32□□□□□ -0.6
NEDD8-206ENST00000531430 USP5P45974 858 aa11.32□□□□□ -0.6
NEDD8-206ENST00000531430 CCNA1P78396 465 aa11.32□□□□□ -0.6
NEDD8-206ENST00000531430 USP17L24Q0WX57 530 aa11.32□□□□□ -0.6
NEDD8-206ENST00000531430 MAP2K5Q13163 448 aa11.32□□□□□ -0.6
NEDD8-206ENST00000531430 MORN1Q5T089 497 aa11.32□□□□□ -0.6
NEDD8-206ENST00000531430 ANO1Q5XXA6 986 aa11.32□□□□□ -0.6
NEDD8-206ENST00000531430 ATF7IPQ6VMQ6 1270 aa11.32□□□□□ -0.6
NEDD8-206ENST00000531430 PRDM5Q9NQX1 630 aaPredicted RBP11.32□□□□□ -0.6
NEDD8-206ENST00000531430 IVNS1ABPQ9Y6Y0 642 aa11.32□□□□□ -0.6
NEDD8-206ENST00000531430 ZBTB22O15209 634 aa11.31□□□□□ -0.6
NEDD8-206ENST00000531430 CYP7A1P22680 504 aa11.31□□□□□ -0.6
NEDD8-206ENST00000531430 CYP2C19P33261 490 aa11.31□□□□□ -0.6
NEDD8-206ENST00000531430 PPP4CP60510 307 aa11.31□□□□□ -0.6
NEDD8-206ENST00000531430 GJC2Q5T442 439 aaPredicted RBP11.31□□□□□ -0.6
NEDD8-206ENST00000531430 ZNF697Q5TEC3 545 aa11.31□□□□□ -0.6
NEDD8-206ENST00000531430 DPP9Q86TI2 863 aa11.31□□□□□ -0.6
NEDD8-206ENST00000531430 GTF3C2Q8WUA4 911 aaPredicted RBP11.31□□□□□ -0.6
NEDD8-206ENST00000531430 USP6NLQ92738 828 aa11.31□□□□□ -0.6
NEDD8-206ENST00000531430 CLUAP1Q96AJ1 413 aa11.31□□□□□ -0.6
NEDD8-206ENST00000531430 APBA2Q99767 749 aa11.31□□□□□ -0.6
NEDD8-206ENST00000531430 FLRT1Q9NZU1 646 aa11.31□□□□□ -0.6
NEDD8-206ENST00000531430 FLT1P17948 1338 aa11.31□□□□□ -0.6
NEDD8-206ENST00000531430 ATAD5Q96QE3 1844 aa11.3□□□□□ -0.6
NEDD8-206ENST00000531430 PNMA6EA0A0J9YXQ4 647 aa11.3□□□□□ -0.6
NEDD8-206ENST00000531430 POTEB2H3BUK9 544 aa11.3□□□□□ -0.6
NEDD8-206ENST00000531430 PTPREP23469 700 aa11.3□□□□□ -0.6
NEDD8-206ENST00000531430 ZAP70P43403 619 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms