RNA–Protein interactions for RNA: ENST00000531050.5

PTPRK-219, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 1 (best)

Gene PTPRK, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-219ENST00000531050 A1BGP04217 495 aa8.77□□□□□ -1.01
PTPRK-219ENST00000531050 MCM3P25205 808 aa8.77□□□□□ -1.01
PTPRK-219ENST00000531050 BLMHQ13867 455 aa8.77□□□□□ -1.01
PTPRK-219ENST00000531050 NFE2L2Q16236 605 aa8.77□□□□□ -1.01
PTPRK-219ENST00000531050 CCDC178Q5BJE1 867 aa8.77□□□□□ -1.01
PTPRK-219ENST00000531050 ANKRD20A8PQ5CZ79 823 aa8.77□□□□□ -1.01
PTPRK-219ENST00000531050 RAD9BQ6WBX8 426 aa8.77□□□□□ -1.01
PTPRK-219ENST00000531050 ARHGEF1Q92888 912 aaKnown RBP8.77□□□□□ -1.01
PTPRK-219ENST00000531050 TBC1D31Q96DN5 1066 aa8.77□□□□□ -1.01
PTPRK-219ENST00000531050 RBM41Q96IZ5 413 aaKnown RBP8.77□□□□□ -1.01
PTPRK-219ENST00000531050 CCT8L2Q96SF2 557 aa8.77□□□□□ -1.01
PTPRK-219ENST00000531050 NAPGQ99747 312 aaPredicted RBP8.77□□□□□ -1.01
PTPRK-219ENST00000531050 YIPF2Q9BWQ6 316 aa8.77□□□□□ -1.01
PTPRK-219ENST00000531050 HOOK1Q9UJC3 728 aaKnown RBP8.77□□□□□ -1.01
PTPRK-219ENST00000531050 KIF13AQ9H1H9 1805 aa8.77□□□□□ -1.01
PTPRK-219ENST00000531050 TARSL2A2RTX5 802 aaKnown RBP8.77□□□□□ -1.01
PTPRK-219ENST00000531050 FCHSD2O94868 740 aa8.77□□□□□ -1.01
PTPRK-219ENST00000531050 PRKAR2BP31323 418 aa8.77□□□□□ -1.01
PTPRK-219ENST00000531050 NDUFA8P51970 172 aa8.77□□□□□ -1.01
PTPRK-219ENST00000531050 PTGISQ16647 500 aa8.77□□□□□ -1.01
PTPRK-219ENST00000531050 CCNI2Q6ZMN8 369 aaPredicted RBP8.77□□□□□ -1.01
PTPRK-219ENST00000531050 CCDC121Q6ZUS5 278 aa8.77□□□□□ -1.01
PTPRK-219ENST00000531050 NLRP14Q86W24 1093 aa8.77□□□□□ -1.01
PTPRK-219ENST00000531050 GALNT15Q8N3T1 639 aa8.77□□□□□ -1.01
PTPRK-219ENST00000531050 MYCBPAPQ8TBZ2 947 aa8.77□□□□□ -1.01
PTPRK-219ENST00000531050 PI4K2BQ8TCG2 481 aa8.77□□□□□ -1.01
PTPRK-219ENST00000531050 ZFAND2BQ8WV99 257 aa8.77□□□□□ -1.01
PTPRK-219ENST00000531050 MRPS27Q92552 414 aaKnown RBP8.77□□□□□ -1.01
PTPRK-219ENST00000531050 CUL5Q93034 780 aa8.77□□□□□ -1.01
PTPRK-219ENST00000531050 RBM17Q96I25 401 aaKnown RBP8.77□□□□□ -1.01
PTPRK-219ENST00000531050 PHACTR3Q96KR7 559 aa8.77□□□□□ -1.01
PTPRK-219ENST00000531050 TSPAN18Q96SJ8 248 aa8.77□□□□□ -1.01
PTPRK-219ENST00000531050 GORASP1Q9BQQ3 440 aa8.77□□□□□ -1.01
PTPRK-219ENST00000531050 RMI1Q9H9A7 625 aa8.77□□□□□ -1.01
PTPRK-219ENST00000531050 A2ML1A8K2U0 1454 aa8.76□□□□□ -1.01
PTPRK-219ENST00000531050 CHD2O14647 1828 aaKnown RBP8.76□□□□□ -1.01
PTPRK-219ENST00000531050 B4DLN1 442 aa8.76□□□□□ -1.01
PTPRK-219ENST00000531050 ANP32DO95626 131 aa8.76□□□□□ -1.01
PTPRK-219ENST00000531050 ELF3P78545 371 aaPredicted RBP8.76□□□□□ -1.01
PTPRK-219ENST00000531050 NECTIN1Q15223 517 aa8.76□□□□□ -1.01
PTPRK-219ENST00000531050 GNPTABQ3T906 1256 aa8.76□□□□□ -1.01
PTPRK-219ENST00000531050 RINLQ6ZS11 566 aa8.76□□□□□ -1.01
PTPRK-219ENST00000531050 AENQ8WTP8 325 aaKnown RBP8.76□□□□□ -1.01
PTPRK-219ENST00000531050 PHF8Q9UPP1 1060 aa8.76□□□□□ -1.01
PTPRK-219ENST00000531050 DIAPH1O60610 1272 aaKnown RBP8.76□□□□□ -1.01
PTPRK-219ENST00000531050 KIF4AO95239 1232 aa8.76□□□□□ -1.01
PTPRK-219ENST00000531050 ATP4AP20648 1035 aa8.76□□□□□ -1.01
PTPRK-219ENST00000531050 ABL2P42684 1182 aa8.76□□□□□ -1.01
PTPRK-219ENST00000531050 MAGEA10P43363 369 aaPredicted RBP8.76□□□□□ -1.01
PTPRK-219ENST00000531050 SCTRP47872 440 aa8.76□□□□□ -1.01
PTPRK-219ENST00000531050 ME1P48163 572 aa8.76□□□□□ -1.01
PTPRK-219ENST00000531050 ATP1A2P50993 1020 aa8.76□□□□□ -1.01
PTPRK-219ENST00000531050 SCNN1BP51168 640 aa8.76□□□□□ -1.01
PTPRK-219ENST00000531050 SEC24CP53992 1094 aa8.76□□□□□ -1.01
PTPRK-219ENST00000531050 MYL5Q02045 173 aa8.76□□□□□ -1.01
PTPRK-219ENST00000531050 MKRN4PQ13434 485 aaPredicted RBP8.76□□□□□ -1.01
PTPRK-219ENST00000531050 TOB2Q14106 344 aaPredicted RBP8.76□□□□□ -1.01
PTPRK-219ENST00000531050 CRELD2Q6UXH1 353 aaPredicted RBP8.76□□□□□ -1.01
PTPRK-219ENST00000531050 RNPC3Q96LT9 517 aaKnown RBP8.76□□□□□ -1.01
PTPRK-219ENST00000531050 TCEANC2Q96MN5 208 aa8.76□□□□□ -1.01
PTPRK-219ENST00000531050 TSC22D3Q99576 134 aa8.76□□□□□ -1.01
PTPRK-219ENST00000531050 MMADHCQ9H3L0 296 aaPredicted RBP8.76□□□□□ -1.01
PTPRK-219ENST00000531050 MYO1AQ9UBC5 1043 aa8.76□□□□□ -1.01
PTPRK-219ENST00000531050 NRXN3Q9Y4C0 1643 aa8.76□□□□□ -1.01
PTPRK-219ENST00000531050 ATP7BP35670 1465 aa8.76□□□□□ -1.01
PTPRK-219ENST00000531050 PNPLA6Q8IY17 1366 aa8.75□□□□□ -1.01
PTPRK-219ENST00000531050 PNMA6EA0A0J9YXQ4 647 aa8.75□□□□□ -1.01
PTPRK-219ENST00000531050 H3BQV1 296 aa8.75□□□□□ -1.01
PTPRK-219ENST00000531050 OPA1O60313 960 aa8.75□□□□□ -1.01
PTPRK-219ENST00000531050 ABL1P00519 1130 aa8.75□□□□□ -1.01
PTPRK-219ENST00000531050 SLC3A2P08195 630 aaKnown RBP8.75□□□□□ -1.01
PTPRK-219ENST00000531050 GUCY1A3Q02108 690 aa8.75□□□□□ -1.01
PTPRK-219ENST00000531050 STK3Q13188 491 aa8.75□□□□□ -1.01
PTPRK-219ENST00000531050 SLMAPQ14BN4 828 aa8.75□□□□□ -1.01
PTPRK-219ENST00000531050 RRP12Q5JTH9 1297 aaKnown RBP8.75□□□□□ -1.01
PTPRK-219ENST00000531050 IFFO2Q5TF58 517 aa8.75□□□□□ -1.01
PTPRK-219ENST00000531050 HDGFL2Q7Z4V5 671 aaPredicted RBP8.75□□□□□ -1.01
PTPRK-219ENST00000531050 TRIM42Q8IWZ5 723 aa8.75□□□□□ -1.01
PTPRK-219ENST00000531050 SH2D3CQ8N5H7 860 aa8.75□□□□□ -1.01
PTPRK-219ENST00000531050 CDK19Q9BWU1 502 aa8.75□□□□□ -1.01
PTPRK-219ENST00000531050 TSPYL2Q9H2G4 693 aaPredicted RBP8.75□□□□□ -1.01
PTPRK-219ENST00000531050 SENP2Q9HC62 589 aa8.75□□□□□ -1.01
PTPRK-219ENST00000531050 POLD4Q9HCU8 107 aa8.75□□□□□ -1.01
PTPRK-219ENST00000531050 SLC5A4Q9NY91 659 aa8.75□□□□□ -1.01
PTPRK-219ENST00000531050 PCDHA7Q9UN72 937 aa8.75□□□□□ -1.01
PTPRK-219ENST00000531050 RIMS2Q9UQ26 1411 aa8.75□□□□□ -1.01
PTPRK-219ENST00000531050 RBM47A0AV96 593 aaKnown RBP8.75□□□□□ -1.01
PTPRK-219ENST00000531050 PPP1R37O75864 691 aa8.75□□□□□ -1.01
PTPRK-219ENST00000531050 FAM107AO95990 144 aa8.75□□□□□ -1.01
PTPRK-219ENST00000531050 NBPF7P0C2Y1 421 aaPredicted RBP8.75□□□□□ -1.01
PTPRK-219ENST00000531050 G3BP1Q13283 466 aaKnown RBP eCLIP8.75□□□□□ -1.01
PTPRK-219ENST00000531050 LACTB2Q53H82 288 aaPredicted RBP8.75□□□□□ -1.01
PTPRK-219ENST00000531050 SPECC1LQ69YQ0 1117 aa8.75□□□□□ -1.01
PTPRK-219ENST00000531050 KDM7AQ6ZMT4 941 aa8.75□□□□□ -1.01
PTPRK-219ENST00000531050 SDCCAG8Q86SQ7 713 aaPredicted RBP8.75□□□□□ -1.01
PTPRK-219ENST00000531050 RRP36Q96EU6 259 aaKnown RBP8.75□□□□□ -1.01
PTPRK-219ENST00000531050 L3MBTL3Q96JM7 780 aaPredicted RBP8.75□□□□□ -1.01
PTPRK-219ENST00000531050 ZFATQ9P243 1243 aa8.75□□□□□ -1.01
PTPRK-219ENST00000531050 CYP27B1O15528 508 aa8.74□□□□□ -1.01
PTPRK-219ENST00000531050 MAP3K13O43283 966 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms