RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 FEZ1Q99689 392 aa19.31■□□□□ 0.68
CHMP4A-204ENST00000530996 WDR18Q9BV38 432 aa19.31■□□□□ 0.68
CHMP4A-204ENST00000530996 PAK6Q9NQU5 681 aaPredicted RBP19.31■□□□□ 0.68
CHMP4A-204ENST00000530996 USP17L10C9JJH3 530 aa19.3■□□□□ 0.68
CHMP4A-204ENST00000530996 PPP4CP60510 307 aa19.3■□□□□ 0.68
CHMP4A-204ENST00000530996 PDE3AQ14432 1141 aa19.3■□□□□ 0.68
CHMP4A-204ENST00000530996 PAGR1Q9BTK6 254 aa19.3■□□□□ 0.68
CHMP4A-204ENST00000530996 CEP290O15078 2479 aa19.3■□□□□ 0.68
CHMP4A-204ENST00000530996 ZBTB7BO15156 539 aaPredicted RBP19.29■□□□□ 0.68
CHMP4A-204ENST00000530996 HERVK_113P62684 666 aa19.29■□□□□ 0.68
CHMP4A-204ENST00000530996 ZYXQ15942 572 aaKnown RBP19.29■□□□□ 0.68
CHMP4A-204ENST00000530996 FOXP4Q8IVH2 680 aaPredicted RBP19.29■□□□□ 0.68
CHMP4A-204ENST00000530996 MAGEB6Q8N7X4 407 aa19.29■□□□□ 0.68
CHMP4A-204ENST00000530996 DIS3LQ8TF46 1054 aaKnown RBP19.29■□□□□ 0.68
CHMP4A-204ENST00000530996 ZNF512BQ96KM6 892 aaPredicted RBP19.29■□□□□ 0.68
CHMP4A-204ENST00000530996 MORF4L1Q9UBU8 362 aa19.29■□□□□ 0.68
CHMP4A-204ENST00000530996 NDUFB9Q9Y6M9 179 aa19.29■□□□□ 0.68
CHMP4A-204ENST00000530996 SIPA1L1O43166 1804 aa19.28■□□□□ 0.68
CHMP4A-204ENST00000530996 C19orf81C9J6K1 198 aa19.28■□□□□ 0.68
CHMP4A-204ENST00000530996 RLBP1P12271 317 aa19.28■□□□□ 0.68
CHMP4A-204ENST00000530996 CYP2B6P20813 491 aa19.28■□□□□ 0.68
CHMP4A-204ENST00000530996 JAG1P78504 1218 aa19.28■□□□□ 0.68
CHMP4A-204ENST00000530996 AACSQ86V21 672 aa19.28■□□□□ 0.68
CHMP4A-204ENST00000530996 GPRC5AQ8NFJ5 357 aa19.28■□□□□ 0.68
CHMP4A-204ENST00000530996 SOCS4Q8WXH5 440 aa19.28■□□□□ 0.68
CHMP4A-204ENST00000530996 PAWRQ96IZ0 340 aaKnown RBP19.28■□□□□ 0.68
CHMP4A-204ENST00000530996 HMX1Q9NP08 348 aaPredicted RBP19.28■□□□□ 0.68
CHMP4A-204ENST00000530996 EXOC6BQ9Y2D4 811 aa19.28■□□□□ 0.68
CHMP4A-204ENST00000530996 TRIOBPQ9H2D6 2365 aa19.27■□□□□ 0.68
CHMP4A-204ENST00000530996 PEX10O60683 326 aa19.27■□□□□ 0.68
CHMP4A-204ENST00000530996 GH2P01242 217 aa19.27■□□□□ 0.68
CHMP4A-204ENST00000530996 CAPN2P17655 700 aa19.27■□□□□ 0.68
CHMP4A-204ENST00000530996 MAP3K12Q12852 859 aa19.27■□□□□ 0.68
CHMP4A-204ENST00000530996 TRIM32Q13049 653 aa19.27■□□□□ 0.68
CHMP4A-204ENST00000530996 NECAB2Q7Z6G3 386 aa19.27■□□□□ 0.68
CHMP4A-204ENST00000530996 CERS3Q8IU89 383 aa19.27■□□□□ 0.68
CHMP4A-204ENST00000530996 EAF2Q96CJ1 260 aaPredicted RBP19.27■□□□□ 0.68
CHMP4A-204ENST00000530996 P2RX7Q99572 595 aaKnown RBP19.27■□□□□ 0.68
CHMP4A-204ENST00000530996 NUDT12Q9BQG2 462 aa19.27■□□□□ 0.68
CHMP4A-204ENST00000530996 CRISPLD2Q9H0B8 497 aa19.27■□□□□ 0.68
CHMP4A-204ENST00000530996 BCL11AQ9H165 835 aa19.27■□□□□ 0.68
CHMP4A-204ENST00000530996 GINM1Q9NU53 330 aa19.27■□□□□ 0.68
CHMP4A-204ENST00000530996 NOP58Q9Y2X3 529 aaKnown RBP19.27■□□□□ 0.68
CHMP4A-204ENST00000530996 IGSF3O75054 1194 aa19.26■□□□□ 0.67
CHMP4A-204ENST00000530996 ZKSCAN1P17029 563 aaPredicted RBP19.26■□□□□ 0.67
CHMP4A-204ENST00000530996 HOXA7P31268 230 aaPredicted RBP19.26■□□□□ 0.67
CHMP4A-204ENST00000530996 CEP85Q6P2H3 762 aa19.26■□□□□ 0.67
CHMP4A-204ENST00000530996 USP17L2Q6R6M4 530 aa19.26■□□□□ 0.67
CHMP4A-204ENST00000530996 ERC1Q8IUD2 1116 aa19.26■□□□□ 0.67
CHMP4A-204ENST00000530996 C7orf61Q8IZ16 206 aa19.26■□□□□ 0.67
CHMP4A-204ENST00000530996 GTF3C2Q8WUA4 911 aaPredicted RBP19.26■□□□□ 0.67
CHMP4A-204ENST00000530996 TRIB2Q92519 343 aa19.26■□□□□ 0.67
CHMP4A-204ENST00000530996 TXNRD2Q9NNW7 524 aa19.26■□□□□ 0.67
CHMP4A-204ENST00000530996 RPTORQ8N122 1335 aa19.25■□□□□ 0.67
CHMP4A-204ENST00000530996 PRKAR2AP13861 404 aaKnown RBP19.25■□□□□ 0.67
CHMP4A-204ENST00000530996 MAPK4P31152 587 aa19.25■□□□□ 0.67
CHMP4A-204ENST00000530996 RAB3GAP1Q15042 981 aa19.25■□□□□ 0.67
CHMP4A-204ENST00000530996 SERPINB13Q9UIV8 391 aa19.25■□□□□ 0.67
CHMP4A-204ENST00000530996 ERVK-9P63128 1117 aa19.24■□□□□ 0.67
CHMP4A-204ENST00000530996 ERVK-24P63145 666 aa19.24■□□□□ 0.67
CHMP4A-204ENST00000530996 WDR78Q5VTH9 848 aa19.24■□□□□ 0.67
CHMP4A-204ENST00000530996 METTL16Q86W50 562 aaKnown RBP19.24■□□□□ 0.67
CHMP4A-204ENST00000530996 ANTXR1Q9H6X2 564 aa19.24■□□□□ 0.67
CHMP4A-204ENST00000530996 GJD2Q9UKL4 321 aa19.24■□□□□ 0.67
CHMP4A-204ENST00000530996 APBB1O00213 710 aa19.23■□□□□ 0.67
CHMP4A-204ENST00000530996 TTC6Q86TZ1 520 aa19.23■□□□□ 0.67
CHMP4A-204ENST00000530996 ANKLE1Q8NAG6 615 aa19.23■□□□□ 0.67
CHMP4A-204ENST00000530996 PANK1Q8TE04 598 aa19.23■□□□□ 0.67
CHMP4A-204ENST00000530996 IL1RAPL2Q9NP60 686 aa19.23■□□□□ 0.67
CHMP4A-204ENST00000530996 RGS2P41220 211 aa19.22■□□□□ 0.67
CHMP4A-204ENST00000530996 USP14P54578 494 aa19.22■□□□□ 0.67
CHMP4A-204ENST00000530996 ABCB5Q2M3G0 1257 aa19.22■□□□□ 0.67
CHMP4A-204ENST00000530996 CERKLQ49MI3 558 aaPredicted RBP19.22■□□□□ 0.67
CHMP4A-204ENST00000530996 HSP90AB4PQ58FF6 505 aa19.22■□□□□ 0.67
CHMP4A-204ENST00000530996 GPR142Q7Z601 462 aa19.22■□□□□ 0.67
CHMP4A-204ENST00000530996 PLEKHH3Q7Z736 793 aa19.22■□□□□ 0.67
CHMP4A-204ENST00000530996 DNAJC2Q99543 621 aaKnown RBP19.22■□□□□ 0.67
CHMP4A-204ENST00000530996 APBA2Q99767 749 aa19.22■□□□□ 0.67
CHMP4A-204ENST00000530996 NBPF3Q9H094 633 aa19.22■□□□□ 0.67
CHMP4A-204ENST00000530996 EHD4Q9H223 541 aa19.22■□□□□ 0.67
CHMP4A-204ENST00000530996 PORCNQ9H237 461 aa19.22■□□□□ 0.67
CHMP4A-204ENST00000530996 CABP5Q9NP86 173 aa19.22■□□□□ 0.67
CHMP4A-204ENST00000530996 EMILIN3Q9NT22 766 aa19.22■□□□□ 0.67
CHMP4A-204ENST00000530996 ZMYND8Q9ULU4 1186 aaPredicted RBP19.22■□□□□ 0.67
CHMP4A-204ENST00000530996 FOCADQ5VW36 1801 aa19.22■□□□□ 0.67
CHMP4A-204ENST00000530996 MAGEB6P1A0A0J9YX57 407 aa19.21■□□□□ 0.67
CHMP4A-204ENST00000530996 POLR3DP05423 398 aaPredicted RBP19.21■□□□□ 0.67
CHMP4A-204ENST00000530996 CCNA1P78396 465 aa19.21■□□□□ 0.67
CHMP4A-204ENST00000530996 TTF1Q15361 905 aaPredicted RBP19.21■□□□□ 0.67
CHMP4A-204ENST00000530996 TRMT44Q8IYL2 757 aaKnown RBP19.21■□□□□ 0.67
CHMP4A-204ENST00000530996 C11orf49Q9H6J7 331 aa19.21■□□□□ 0.67
CHMP4A-204ENST00000530996 RBPJLQ9UBG7 517 aa19.21■□□□□ 0.67
CHMP4A-204ENST00000530996 CDK5RAP2Q96SN8 1893 aa19.2■□□□□ 0.66
CHMP4A-204ENST00000530996 RANBP2P49792 3224 aaKnown RBP19.2■□□□□ 0.66
CHMP4A-204ENST00000530996 USP17L15C9J2P7 530 aa19.2■□□□□ 0.66
CHMP4A-204ENST00000530996 USP17L13C9JLJ4 530 aa19.2■□□□□ 0.66
CHMP4A-204ENST00000530996 USP17L11C9JVI0 530 aa19.2■□□□□ 0.66
CHMP4A-204ENST00000530996 USP17L18D6R9N7 530 aa19.2■□□□□ 0.66
CHMP4A-204ENST00000530996 USP17L22D6RA61 530 aa19.2■□□□□ 0.66
CHMP4A-204ENST00000530996 USP17L17D6RBQ6 530 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms