RNA–Protein interactions for RNA: ENST00000530724.1

TRIM3-210, Transcript of tripartite motif containing 3, humanhuman

TSL 2

Gene TRIM3, Length 651 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-210ENST00000530724 RNF40O75150 1001 aa13.28□□□□□ -0.28
TRIM3-210ENST00000530724 MMP1P03956 469 aa13.28□□□□□ -0.28
TRIM3-210ENST00000530724 CHGBP05060 677 aa13.28□□□□□ -0.28
TRIM3-210ENST00000530724 TNFRSF8P28908 595 aa13.28□□□□□ -0.28
TRIM3-210ENST00000530724 RBL2Q08999 1139 aa13.28□□□□□ -0.28
TRIM3-210ENST00000530724 FAM69CQ0P6D2 419 aa13.28□□□□□ -0.28
TRIM3-210ENST00000530724 TRDNQ13061 729 aa13.28□□□□□ -0.28
TRIM3-210ENST00000530724 MCM6Q14566 821 aa13.28□□□□□ -0.28
TRIM3-210ENST00000530724 ZNF569Q5MCW4 686 aa13.28□□□□□ -0.28
TRIM3-210ENST00000530724 LMBR1LQ6UX01 489 aa13.28□□□□□ -0.28
TRIM3-210ENST00000530724 TEX2Q8IWB9 1127 aa13.28□□□□□ -0.28
TRIM3-210ENST00000530724 SLC35F6Q8N357 371 aa13.28□□□□□ -0.28
TRIM3-210ENST00000530724 IGDCC4Q8TDY8 1250 aa13.28□□□□□ -0.28
TRIM3-210ENST00000530724 STAG1Q8WVM7 1258 aa13.28□□□□□ -0.28
TRIM3-210ENST00000530724 SH3GL2Q99962 352 aa13.28□□□□□ -0.28
TRIM3-210ENST00000530724 PLA2G12BQ9BX93 195 aa13.28□□□□□ -0.28
TRIM3-210ENST00000530724 FAM204AQ9H8W3 233 aa13.28□□□□□ -0.28
TRIM3-210ENST00000530724 FAM217BQ9NTX9 383 aaPredicted RBP13.28□□□□□ -0.28
TRIM3-210ENST00000530724 CDHR2Q9BYE9 1310 aa13.28□□□□□ -0.28
TRIM3-210ENST00000530724 A0A087WZG4 1122 aa13.27□□□□□ -0.29
TRIM3-210ENST00000530724 PRAMEF22A3QJZ6 481 aa13.27□□□□□ -0.29
TRIM3-210ENST00000530724 LRRIQ3A6PVS8 624 aaPredicted RBP13.27□□□□□ -0.29
TRIM3-210ENST00000530724 GYPCP04921 128 aa13.27□□□□□ -0.29
TRIM3-210ENST00000530724 PRLRP16471 622 aa13.27□□□□□ -0.29
TRIM3-210ENST00000530724 TOB1P50616 345 aaPredicted RBP13.27□□□□□ -0.29
TRIM3-210ENST00000530724 FOSBP53539 338 aa13.27□□□□□ -0.29
TRIM3-210ENST00000530724 SKOR1P84550 965 aa13.27□□□□□ -0.29
TRIM3-210ENST00000530724 TRIM28Q13263 835 aaKnown RBP13.27□□□□□ -0.29
TRIM3-210ENST00000530724 KARSQ15046 597 aaKnown RBP13.27□□□□□ -0.29
TRIM3-210ENST00000530724 UBE3CQ15386 1083 aa13.27□□□□□ -0.29
TRIM3-210ENST00000530724 SLC9C2Q5TAH2 1124 aa13.27□□□□□ -0.29
TRIM3-210ENST00000530724 TTLL5Q6EMB2 1281 aa13.27□□□□□ -0.29
TRIM3-210ENST00000530724 YTHDF3Q7Z739 585 aaKnown RBP13.27□□□□□ -0.29
TRIM3-210ENST00000530724 PDILTQ8N807 584 aa13.27□□□□□ -0.29
TRIM3-210ENST00000530724 FBXW7Q969H0 707 aa13.27□□□□□ -0.29
TRIM3-210ENST00000530724 IQCDQ96DY2 449 aa13.27□□□□□ -0.29
TRIM3-210ENST00000530724 NBPF3Q9H094 633 aa13.27□□□□□ -0.29
TRIM3-210ENST00000530724 GPHNQ9NQX3 736 aaPredicted RBP13.27□□□□□ -0.29
TRIM3-210ENST00000530724 TJP1Q07157 1748 aa13.27□□□□□ -0.29
TRIM3-210ENST00000530724 A0A0G2JLW4 131 aa13.26□□□□□ -0.29
TRIM3-210ENST00000530724 N4BP1O75113 896 aaKnown RBP13.26□□□□□ -0.29
TRIM3-210ENST00000530724 IARSP41252 1262 aaKnown RBP13.26□□□□□ -0.29
TRIM3-210ENST00000530724 GYS2P54840 703 aa13.26□□□□□ -0.29
TRIM3-210ENST00000530724 CDK17Q00537 523 aa13.26□□□□□ -0.29
TRIM3-210ENST00000530724 DDR1Q08345 913 aa13.26□□□□□ -0.29
TRIM3-210ENST00000530724 GOLGA8FQ08AF8 430 aa13.26□□□□□ -0.29
TRIM3-210ENST00000530724 GOLGA8DPQ0D2H9 430 aa13.26□□□□□ -0.29
TRIM3-210ENST00000530724 NNTQ13423 1086 aa13.26□□□□□ -0.29
TRIM3-210ENST00000530724 MTF1Q14872 753 aa13.26□□□□□ -0.29
TRIM3-210ENST00000530724 SAFBQ15424 915 aaKnown RBP eCLIP13.26□□□□□ -0.29
TRIM3-210ENST00000530724 UBN2Q6ZU65 1347 aa13.26□□□□□ -0.29
TRIM3-210ENST00000530724 CCDC91Q7Z6B0 441 aa13.26□□□□□ -0.29
TRIM3-210ENST00000530724 AMOTL1Q8IY63 956 aa13.26□□□□□ -0.29
TRIM3-210ENST00000530724 THEMISQ8N1K5 641 aaPredicted RBP13.26□□□□□ -0.29
TRIM3-210ENST00000530724 FERMT2Q96AC1 680 aa13.26□□□□□ -0.29
TRIM3-210ENST00000530724 TRERF1Q96PN7 1200 aa13.26□□□□□ -0.29
TRIM3-210ENST00000530724 PURBQ96QR8 312 aaKnown RBP13.26□□□□□ -0.29
TRIM3-210ENST00000530724 DNAJC7Q99615 494 aa13.26□□□□□ -0.29
TRIM3-210ENST00000530724 DESI2Q9BSY9 194 aa13.26□□□□□ -0.29
TRIM3-210ENST00000530724 STRN4Q9NRL3 753 aa13.26□□□□□ -0.29
TRIM3-210ENST00000530724 SAMSN1Q9NSI8 373 aaKnown RBP13.26□□□□□ -0.29
TRIM3-210ENST00000530724 ABHD10Q9NUJ1 306 aa13.26□□□□□ -0.29
TRIM3-210ENST00000530724 NUP188Q5SRE5 1749 aa13.25□□□□□ -0.29
TRIM3-210ENST00000530724 SYNRGQ9UMZ2 1314 aa13.25□□□□□ -0.29
TRIM3-210ENST00000530724 PPP1R3GB7ZBB8 358 aa13.25□□□□□ -0.29
TRIM3-210ENST00000530724 GOLGA8KD6RF30 607 aa13.25□□□□□ -0.29
TRIM3-210ENST00000530724 ZBTB43O43298 467 aa13.25□□□□□ -0.29
TRIM3-210ENST00000530724 RANBP6O60518 1105 aaKnown RBP13.25□□□□□ -0.29
TRIM3-210ENST00000530724 DPYDQ12882 1025 aa13.25□□□□□ -0.29
TRIM3-210ENST00000530724 PPFIA1Q13136 1202 aa13.25□□□□□ -0.29
TRIM3-210ENST00000530724 MEA1Q16626 185 aa13.25□□□□□ -0.29
TRIM3-210ENST00000530724 IQCEQ6IPM2 695 aa13.25□□□□□ -0.29
TRIM3-210ENST00000530724 FNBP4Q8N3X1 1017 aaPredicted RBP13.25□□□□□ -0.29
TRIM3-210ENST00000530724 MMGT1Q8N4V1 131 aa13.25□□□□□ -0.29
TRIM3-210ENST00000530724 CLIC6Q96NY7 704 aa13.25□□□□□ -0.29
TRIM3-210ENST00000530724 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.25□□□□□ -0.29
TRIM3-210ENST00000530724 LY9Q9HBG7 655 aa13.25□□□□□ -0.29
TRIM3-210ENST00000530724 CWC25Q9NXE8 425 aaPredicted RBP13.25□□□□□ -0.29
TRIM3-210ENST00000530724 SERTAD1Q9UHV2 236 aa13.25□□□□□ -0.29
TRIM3-210ENST00000530724 RWDD2AQ9UIY3 292 aa13.25□□□□□ -0.29
TRIM3-210ENST00000530724 CCDC196A0A1B0GTZ2 297 aa13.24□□□□□ -0.29
TRIM3-210ENST00000530724 GCP02774 474 aa13.24□□□□□ -0.29
TRIM3-210ENST00000530724 PHKG2P15735 406 aa13.24□□□□□ -0.29
TRIM3-210ENST00000530724 ERVK-24P63145 666 aa13.24□□□□□ -0.29
TRIM3-210ENST00000530724 APBA1Q02410 837 aa13.24□□□□□ -0.29
TRIM3-210ENST00000530724 AIMP1Q12904 312 aaKnown RBP13.24□□□□□ -0.29
TRIM3-210ENST00000530724 STIM1Q13586 685 aa13.24□□□□□ -0.29
TRIM3-210ENST00000530724 TTF1Q15361 905 aaPredicted RBP13.24□□□□□ -0.29
TRIM3-210ENST00000530724 CCNI2Q6ZMN8 369 aaPredicted RBP13.24□□□□□ -0.29
TRIM3-210ENST00000530724 FAM177A1Q8N128 213 aaPredicted RBP13.24□□□□□ -0.29
TRIM3-210ENST00000530724 CNPY4Q8N129 248 aa13.24□□□□□ -0.29
TRIM3-210ENST00000530724 TMTC2Q8N394 836 aa13.24□□□□□ -0.29
TRIM3-210ENST00000530724 RETREG2Q8NC44 543 aa13.24□□□□□ -0.29
TRIM3-210ENST00000530724 AENQ8WTP8 325 aaKnown RBP13.24□□□□□ -0.29
TRIM3-210ENST00000530724 XAGE2Q96GT9 111 aa13.24□□□□□ -0.29
TRIM3-210ENST00000530724 DCAF5Q96JK2 942 aa13.24□□□□□ -0.29
TRIM3-210ENST00000530724 IRX2Q9BZI1 471 aaPredicted RBP13.24□□□□□ -0.29
TRIM3-210ENST00000530724 CNNM2Q9H8M5 875 aa13.24□□□□□ -0.29
TRIM3-210ENST00000530724 CEP126Q9P2H0 1117 aa13.24□□□□□ -0.29
TRIM3-210ENST00000530724 PUF60Q9UHX1 559 aaKnown RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms