RNA–Protein interactions for RNA: ENST00000530646.1

RPL38-205, Transcript of ribosomal protein L38, humanhuman

TSL 1 (best)

Gene RPL38, Length 2,450 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL38-205ENST00000530646 MAST3O60307 1309 aa20.53■□□□□ 0.88
RPL38-205ENST00000530646 SOS2Q07890 1332 aaPredicted RBP20.53■□□□□ 0.88
RPL38-205ENST00000530646 CASP14P31944 242 aa20.53■□□□□ 0.88
RPL38-205ENST00000530646 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.53■□□□□ 0.88
RPL38-205ENST00000530646 FAM76AQ8TAV0 307 aa20.52■□□□□ 0.88
RPL38-205ENST00000530646 DACH1Q9UI36 760 aa20.52■□□□□ 0.88
RPL38-205ENST00000530646 PRC1O43663 620 aa20.52■□□□□ 0.88
RPL38-205ENST00000530646 FECHP22830 423 aa20.52■□□□□ 0.88
RPL38-205ENST00000530646 USP8P40818 1118 aa20.52■□□□□ 0.88
RPL38-205ENST00000530646 SLC39A6Q13433 755 aa20.52■□□□□ 0.88
RPL38-205ENST00000530646 PAG1Q9NWQ8 432 aa20.52■□□□□ 0.88
RPL38-205ENST00000530646 FXR1P51114 621 aaKnown RBP eCLIP20.51■□□□□ 0.87
RPL38-205ENST00000530646 MAP9Q49MG5 647 aa20.51■□□□□ 0.87
RPL38-205ENST00000530646 TTC39AQ5SRH9 613 aa20.51■□□□□ 0.87
RPL38-205ENST00000530646 RABEP2Q9H5N1 569 aa20.51■□□□□ 0.87
RPL38-205ENST00000530646 BCCIPQ9P287 314 aaKnown RBP eCLIP20.51■□□□□ 0.87
RPL38-205ENST00000530646 MYO1AQ9UBC5 1043 aa20.51■□□□□ 0.87
RPL38-205ENST00000530646 C4AP0C0L4 1744 aa20.51■□□□□ 0.87
RPL38-205ENST00000530646 C4BP0C0L5 1744 aa20.51■□□□□ 0.87
RPL38-205ENST00000530646 NEURL1BA8MQ27 555 aa20.51■□□□□ 0.87
RPL38-205ENST00000530646 DDX58O95786 925 aaKnown RBP20.51■□□□□ 0.87
RPL38-205ENST00000530646 INPP5BP32019 993 aa20.51■□□□□ 0.87
RPL38-205ENST00000530646 ERVK-24P63145 666 aa20.51■□□□□ 0.87
RPL38-205ENST00000530646 KRT40Q6A162 431 aa20.51■□□□□ 0.87
RPL38-205ENST00000530646 GRAMD1CQ8IYS0 662 aa20.51■□□□□ 0.87
RPL38-205ENST00000530646 ALG1Q9BT22 464 aa20.51■□□□□ 0.87
RPL38-205ENST00000530646 SEC31BQ9NQW1 1179 aa20.51■□□□□ 0.87
RPL38-205ENST00000530646 GYPCP04921 128 aa20.5■□□□□ 0.87
RPL38-205ENST00000530646 PLCD1P51178 756 aa20.5■□□□□ 0.87
RPL38-205ENST00000530646 HAND2P61296 217 aa20.5■□□□□ 0.87
RPL38-205ENST00000530646 GCKRQ14397 625 aa20.5■□□□□ 0.87
RPL38-205ENST00000530646 POTEDQ86YR6 584 aa20.5■□□□□ 0.87
RPL38-205ENST00000530646 EGFL6Q8IUX8 553 aa20.5■□□□□ 0.87
RPL38-205ENST00000530646 PRPF38AQ8NAV1 312 aaKnown RBP20.5■□□□□ 0.87
RPL38-205ENST00000530646 BCAS4Q8TDM0 211 aa20.5■□□□□ 0.87
RPL38-205ENST00000530646 ADD3Q9UEY8 706 aaKnown RBP20.5■□□□□ 0.87
RPL38-205ENST00000530646 TAOK2Q9UL54 1235 aa20.5■□□□□ 0.87
RPL38-205ENST00000530646 GRIN2DO15399 1336 aa20.5■□□□□ 0.87
RPL38-205ENST00000530646 M0R2C6 588 aa20.5■□□□□ 0.87
RPL38-205ENST00000530646 ANTXR2P58335 489 aa20.5■□□□□ 0.87
RPL38-205ENST00000530646 NBPF3Q9H094 633 aa20.5■□□□□ 0.87
RPL38-205ENST00000530646 SERTAD1Q9UHV2 236 aa20.5■□□□□ 0.87
RPL38-205ENST00000530646 GOLGA6CA6NDK9 693 aa20.49■□□□□ 0.87
RPL38-205ENST00000530646 GOLGA6DP0CG33 693 aa20.49■□□□□ 0.87
RPL38-205ENST00000530646 SCP2P22307 547 aa20.49■□□□□ 0.87
RPL38-205ENST00000530646 TRAPPC11Q7Z392 1133 aa20.49■□□□□ 0.87
RPL38-205ENST00000530646 MB21D2Q8IYB1 491 aaPredicted RBP20.49■□□□□ 0.87
RPL38-205ENST00000530646 GSPT2Q8IYD1 628 aaKnown RBP20.49■□□□□ 0.87
RPL38-205ENST00000530646 MMS19Q96T76 1030 aa20.49■□□□□ 0.87
RPL38-205ENST00000530646 GOLGA6AQ9NYA3 693 aa20.49■□□□□ 0.87
RPL38-205ENST00000530646 WWC3Q9ULE0 1092 aa20.49■□□□□ 0.87
RPL38-205ENST00000530646 HEG1Q9ULI3 1381 aa20.49■□□□□ 0.87
RPL38-205ENST00000530646 NWD2Q9ULI1 1742 aa20.49■□□□□ 0.87
RPL38-205ENST00000530646 LMO7Q8WWI1 1683 aa20.49■□□□□ 0.87
RPL38-205ENST00000530646 ZMYND10O75800 440 aa20.49■□□□□ 0.87
RPL38-205ENST00000530646 MYBL2P10244 700 aa20.49■□□□□ 0.87
RPL38-205ENST00000530646 MCM3P25205 808 aa20.49■□□□□ 0.87
RPL38-205ENST00000530646 PPFIA1Q13136 1202 aa20.49■□□□□ 0.87
RPL38-205ENST00000530646 CPLX2Q6PUV4 134 aaKnown RBP20.49■□□□□ 0.87
RPL38-205ENST00000530646 CRACR2AQ9BSW2 395 aa20.49■□□□□ 0.87
RPL38-205ENST00000530646 STRN4Q9NRL3 753 aa20.49■□□□□ 0.87
RPL38-205ENST00000530646 EIF3HO15372 352 aaKnown RBP eCLIP20.48■□□□□ 0.87
RPL38-205ENST00000530646 TATP17735 454 aaPredicted RBP20.48■□□□□ 0.87
RPL38-205ENST00000530646 GRIN1Q05586 938 aa20.48■□□□□ 0.87
RPL38-205ENST00000530646 RIC3Q7Z5B4 369 aa20.48■□□□□ 0.87
RPL38-205ENST00000530646 CNGA4Q8IV77 575 aa20.48■□□□□ 0.87
RPL38-205ENST00000530646 KRI1Q8N9T8 703 aaKnown RBP20.48■□□□□ 0.87
RPL38-205ENST00000530646 CAPS2Q9BXY5 557 aa20.48■□□□□ 0.87
RPL38-205ENST00000530646 HDAC6Q9UBN7 1215 aa20.48■□□□□ 0.87
RPL38-205ENST00000530646 CYP27B1O15528 508 aa20.48■□□□□ 0.87
RPL38-205ENST00000530646 ERCC5P28715 1186 aaPredicted RBP20.48■□□□□ 0.87
RPL38-205ENST00000530646 PDIA6Q15084 440 aa20.48■□□□□ 0.87
RPL38-205ENST00000530646 RPAINQ86UA6 219 aa20.48■□□□□ 0.87
RPL38-205ENST00000530646 SELENOOQ9BVL4 669 aa20.48■□□□□ 0.87
RPL38-205ENST00000530646 CAMTA1Q9Y6Y1 1673 aa20.48■□□□□ 0.87
RPL38-205ENST00000530646 DDX60Q8IY21 1712 aaKnown RBP20.47■□□□□ 0.87
RPL38-205ENST00000530646 FOXP2O15409 715 aa20.47■□□□□ 0.87
RPL38-205ENST00000530646 POLR2DO15514 142 aaKnown RBP20.47■□□□□ 0.87
RPL38-205ENST00000530646 FNTAP49354 379 aa20.47■□□□□ 0.87
RPL38-205ENST00000530646 TMTC1Q8IUR5 882 aa20.47■□□□□ 0.87
RPL38-205ENST00000530646 STK11IPQ8N1F8 1099 aa20.47■□□□□ 0.87
RPL38-205ENST00000530646 TRIML1Q8N9V2 468 aa20.47■□□□□ 0.87
RPL38-205ENST00000530646 CCDC51Q96ER9 411 aa20.47■□□□□ 0.87
RPL38-205ENST00000530646 DDX21Q9NR30 783 aaKnown RBP eCLIP20.47■□□□□ 0.87
RPL38-205ENST00000530646 TARSL2A2RTX5 802 aaKnown RBP20.47■□□□□ 0.87
RPL38-205ENST00000530646 RNF113AO15541 343 aaKnown RBP20.47■□□□□ 0.87
RPL38-205ENST00000530646 TRIM10Q9UDY6 481 aa20.47■□□□□ 0.87
RPL38-205ENST00000530646 MAP3K15Q6ZN16 1313 aa20.46■□□□□ 0.87
RPL38-205ENST00000530646 MYH8P13535 1937 aa20.46■□□□□ 0.87
RPL38-205ENST00000530646 SHTN1A0MZ66 631 aa20.46■□□□□ 0.87
RPL38-205ENST00000530646 RNF225M0QZC1 329 aaPredicted RBP20.46■□□□□ 0.87
RPL38-205ENST00000530646 ENC1O14682 589 aa20.46■□□□□ 0.87
RPL38-205ENST00000530646 C21orf2O43822 256 aa20.46■□□□□ 0.87
RPL38-205ENST00000530646 GNGT1P63211 74 aa20.46■□□□□ 0.87
RPL38-205ENST00000530646 TOM1L2Q6ZVM7 507 aa20.46■□□□□ 0.87
RPL38-205ENST00000530646 SLF1Q9BQI6 1058 aa20.46■□□□□ 0.87
RPL38-205ENST00000530646 JPH2Q9BR39 696 aaPredicted RBP20.46■□□□□ 0.87
RPL38-205ENST00000530646 A1CFQ9NQ94 594 aaKnown RBP20.46■□□□□ 0.87
RPL38-205ENST00000530646 SAMM50Q9Y512 469 aa20.46■□□□□ 0.87
RPL38-205ENST00000530646 CAPN7Q9Y6W3 813 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms