RNA–Protein interactions for RNA: ENST00000530618.1

SSBP3-213, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-213ENST00000530618 RAD50Q92878 1312 aa5.74□□□□□ -1.49
SSBP3-213ENST00000530618 COL2A1P02458 1487 aaPredicted RBP5.73□□□□□ -1.49
SSBP3-213ENST00000530618 CDC45O75419 566 aa5.73□□□□□ -1.49
SSBP3-213ENST00000530618 WDHD1O75717 1129 aaPredicted RBP5.73□□□□□ -1.49
SSBP3-213ENST00000530618 BCRP11274 1271 aa5.73□□□□□ -1.49
SSBP3-213ENST00000530618 PRKAR2AP13861 404 aaKnown RBP5.73□□□□□ -1.49
SSBP3-213ENST00000530618 MCAMP43121 646 aa5.73□□□□□ -1.49
SSBP3-213ENST00000530618 ZAP70P43403 619 aa5.73□□□□□ -1.49
SSBP3-213ENST00000530618 TNNI2P48788 182 aa5.73□□□□□ -1.49
SSBP3-213ENST00000530618 GTF2A2P52657 109 aa5.73□□□□□ -1.49
SSBP3-213ENST00000530618 MTFR1Q15390 333 aa5.73□□□□□ -1.49
SSBP3-213ENST00000530618 SLC9C2Q5TAH2 1124 aa5.73□□□□□ -1.49
SSBP3-213ENST00000530618 PI4K2BQ8TCG2 481 aa5.73□□□□□ -1.49
SSBP3-213ENST00000530618 SH3TC2Q8TF17 1288 aa5.73□□□□□ -1.49
SSBP3-213ENST00000530618 ZFYVE28Q9HCC9 887 aa5.73□□□□□ -1.49
SSBP3-213ENST00000530618 DDX4Q9NQI0 724 aaKnown RBP5.73□□□□□ -1.49
SSBP3-213ENST00000530618 TLR7Q9NYK1 1049 aaKnown RBP5.73□□□□□ -1.49
SSBP3-213ENST00000530618 HMG20BQ9P0W2 317 aa5.73□□□□□ -1.49
SSBP3-213ENST00000530618 MUC3AQ02505 3323 aa5.73□□□□□ -1.49
SSBP3-213ENST00000530618 PRUNE2Q8WUY3 3088 aa5.73□□□□□ -1.49
SSBP3-213ENST00000530618 RNF113AO15541 343 aaKnown RBP5.72□□□□□ -1.49
SSBP3-213ENST00000530618 SLC3A2P08195 630 aaKnown RBP5.72□□□□□ -1.49
SSBP3-213ENST00000530618 CETPP11597 493 aa5.72□□□□□ -1.49
SSBP3-213ENST00000530618 OSBPP22059 807 aa5.72□□□□□ -1.49
SSBP3-213ENST00000530618 CYP7A1P22680 504 aa5.72□□□□□ -1.49
SSBP3-213ENST00000530618 RHBDL3P58872 404 aa5.72□□□□□ -1.49
SSBP3-213ENST00000530618 PPATQ06203 517 aa5.72□□□□□ -1.49
SSBP3-213ENST00000530618 SNAPC2Q13487 334 aa5.72□□□□□ -1.49
SSBP3-213ENST00000530618 RRP1BQ14684 758 aaKnown RBP5.72□□□□□ -1.49
SSBP3-213ENST00000530618 UBE3CQ15386 1083 aa5.72□□□□□ -1.49
SSBP3-213ENST00000530618 MCMDC2Q4G0Z9 681 aa5.72□□□□□ -1.49
SSBP3-213ENST00000530618 PPP4R3CPQ6ZMV5 832 aa5.72□□□□□ -1.49
SSBP3-213ENST00000530618 MIGA2Q7L4E1 593 aa5.72□□□□□ -1.49
SSBP3-213ENST00000530618 ANKRD23Q86SG2 305 aa5.72□□□□□ -1.49
SSBP3-213ENST00000530618 APPBP2Q92624 585 aa5.72□□□□□ -1.49
SSBP3-213ENST00000530618 IDI2Q9BXS1 227 aa5.72□□□□□ -1.49
SSBP3-213ENST00000530618 TRIM34Q9BYJ4 488 aa5.72□□□□□ -1.49
SSBP3-213ENST00000530618 ZNF341Q9BYN7 854 aa5.72□□□□□ -1.49
SSBP3-213ENST00000530618 CRNKL1Q9BZJ0 848 aaKnown RBP5.72□□□□□ -1.49
SSBP3-213ENST00000530618 ZNF287Q9HBT7 754 aa5.72□□□□□ -1.49
SSBP3-213ENST00000530618 SNRKQ9NRH2 765 aa5.72□□□□□ -1.49
SSBP3-213ENST00000530618 HELLSQ9NRZ9 838 aa5.72□□□□□ -1.49
SSBP3-213ENST00000530618 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.72□□□□□ -1.49
SSBP3-213ENST00000530618 CTNNA3Q9UI47 895 aa5.72□□□□□ -1.49
SSBP3-213ENST00000530618 CSADQ9Y600 493 aa5.72□□□□□ -1.49
SSBP3-213ENST00000530618 SALL3Q9BXA9 1300 aa5.72□□□□□ -1.49
SSBP3-213ENST00000530618 A0A0G2JMZ2 1700 aa5.71□□□□□ -1.49
SSBP3-213ENST00000530618 NAV1Q8NEY1 1877 aa5.71□□□□□ -1.5
SSBP3-213ENST00000530618 A0A0G2JLL6 359 aaPredicted RBP5.71□□□□□ -1.5
SSBP3-213ENST00000530618 MAGEB6P1A0A0J9YX57 407 aa5.71□□□□□ -1.5
SSBP3-213ENST00000530618 DDTLA6NHG4 134 aaPredicted RBP5.71□□□□□ -1.5
SSBP3-213ENST00000530618 PDHXO00330 501 aa5.71□□□□□ -1.5
SSBP3-213ENST00000530618 EPB41L2O43491 1005 aaKnown RBP5.71□□□□□ -1.5
SSBP3-213ENST00000530618 CYP2E1P05181 493 aaPredicted RBP5.71□□□□□ -1.5
SSBP3-213ENST00000530618 HLA-DOAP06340 250 aa5.71□□□□□ -1.5
SSBP3-213ENST00000530618 PDE6AP16499 860 aa5.71□□□□□ -1.5
SSBP3-213ENST00000530618 SDSP20132 328 aa5.71□□□□□ -1.5
SSBP3-213ENST00000530618 ADD2P35612 726 aa5.71□□□□□ -1.5
SSBP3-213ENST00000530618 USP5P45974 858 aa5.71□□□□□ -1.5
SSBP3-213ENST00000530618 NT5C2P49902 561 aa5.71□□□□□ -1.5
SSBP3-213ENST00000530618 TCP10Q12799 353 aa5.71□□□□□ -1.5
SSBP3-213ENST00000530618 SLC9C1Q4G0N8 1177 aa5.71□□□□□ -1.5
SSBP3-213ENST00000530618 RNF20Q5VTR2 975 aa5.71□□□□□ -1.5
SSBP3-213ENST00000530618 TSHZ3Q63HK5 1081 aa5.71□□□□□ -1.5
SSBP3-213ENST00000530618 OTUD7BQ6GQQ9 843 aa5.71□□□□□ -1.5
SSBP3-213ENST00000530618 PRRT2Q7Z6L0 340 aaPredicted RBP5.71□□□□□ -1.5
SSBP3-213ENST00000530618 CCDC84Q86UT8 332 aaPredicted RBP5.71□□□□□ -1.5
SSBP3-213ENST00000530618 MAGEB6Q8N7X4 407 aa5.71□□□□□ -1.5
SSBP3-213ENST00000530618 SRRDQ9UH36 339 aa5.71□□□□□ -1.5
SSBP3-213ENST00000530618 CPA4Q9UI42 421 aa5.71□□□□□ -1.5
SSBP3-213ENST00000530618 TAOK2Q9UL54 1235 aa5.71□□□□□ -1.5
SSBP3-213ENST00000530618 COLQQ9Y215 455 aaPredicted RBP5.71□□□□□ -1.5
SSBP3-213ENST00000530618 AFG3L2Q9Y4W6 797 aa5.71□□□□□ -1.5
SSBP3-213ENST00000530618 MYH7P12883 1935 aa5.71□□□□□ -1.5
SSBP3-213ENST00000530618 MYH8P13535 1937 aa5.71□□□□□ -1.5
SSBP3-213ENST00000530618 MROH7-TTC4A0A0A0MT08 1334 aa5.71□□□□□ -1.5
SSBP3-213ENST00000530618 LTBP2Q14767 1821 aa5.7□□□□□ -1.5
SSBP3-213ENST00000530618 H0YGN5 161 aa5.7□□□□□ -1.5
SSBP3-213ENST00000530618 ENTPD3O75355 529 aa5.7□□□□□ -1.5
SSBP3-213ENST00000530618 APPP05067 770 aa5.7□□□□□ -1.5
SSBP3-213ENST00000530618 CYP2C8P10632 490 aa5.7□□□□□ -1.5
SSBP3-213ENST00000530618 ZKSCAN1P17029 563 aaPredicted RBP5.7□□□□□ -1.5
SSBP3-213ENST00000530618 PTPRAP18433 802 aa5.7□□□□□ -1.5
SSBP3-213ENST00000530618 PDE4AP27815 886 aa5.7□□□□□ -1.5
SSBP3-213ENST00000530618 TDO2P48775 406 aa5.7□□□□□ -1.5
SSBP3-213ENST00000530618 PRMT2P55345 433 aa5.7□□□□□ -1.5
SSBP3-213ENST00000530618 JAG1P78504 1218 aa5.7□□□□□ -1.5
SSBP3-213ENST00000530618 MECOMQ03112 1051 aa5.7□□□□□ -1.5
SSBP3-213ENST00000530618 DCAF15Q66K64 600 aa5.7□□□□□ -1.5
SSBP3-213ENST00000530618 GIMAP6Q6P9H5 292 aa5.7□□□□□ -1.5
SSBP3-213ENST00000530618 POTEEQ6S8J3 1075 aa5.7□□□□□ -1.5
SSBP3-213ENST00000530618 PI16Q6UXB8 463 aa5.7□□□□□ -1.5
SSBP3-213ENST00000530618 TEX11Q8IYF3 940 aa5.7□□□□□ -1.5
SSBP3-213ENST00000530618 IL27Q8NEV9 243 aa5.7□□□□□ -1.5
SSBP3-213ENST00000530618 OTUD7AQ8TE49 926 aaPredicted RBP5.7□□□□□ -1.5
SSBP3-213ENST00000530618 NSUN4Q96CB9 384 aaKnown RBP5.7□□□□□ -1.5
SSBP3-213ENST00000530618 USP40Q9NVE5 1235 aa5.7□□□□□ -1.5
SSBP3-213ENST00000530618 GABRQQ9UN88 632 aa5.7□□□□□ -1.5
SSBP3-213ENST00000530618 ZNF532Q9HCE3 1301 aa5.7□□□□□ -1.5
SSBP3-213ENST00000530618 ZNFX1Q9P2E3 1918 aaKnown RBP5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms