RNA–Protein interactions for RNA: ENST00000530567.1

CAPN1-220, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 1,415 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-220ENST00000530567 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.37■■□□□ 1.65
CAPN1-220ENST00000530567 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.37■■□□□ 1.65
CAPN1-220ENST00000530567 CEP350Q5VT06 3117 aa25.37■■□□□ 1.65
CAPN1-220ENST00000530567 VEGFBP49765 207 aa25.37■■□□□ 1.65
CAPN1-220ENST00000530567 PAXIP1Q6ZW49 1069 aaPredicted RBP25.37■■□□□ 1.65
CAPN1-220ENST00000530567 TBC1D10CQ8IV04 446 aa25.37■■□□□ 1.65
CAPN1-220ENST00000530567 DNAJC5GQ8N7S2 189 aa25.37■■□□□ 1.65
CAPN1-220ENST00000530567 OPTNQ96CV9 577 aa25.37■■□□□ 1.65
CAPN1-220ENST00000530567 ANO2Q9NQ90 1003 aa25.37■■□□□ 1.65
CAPN1-220ENST00000530567 ZBTB21Q9ULJ3 1066 aa25.37■■□□□ 1.65
CAPN1-220ENST00000530567 GREB1LQ9C091 1923 aaPredicted RBP25.36■■□□□ 1.65
CAPN1-220ENST00000530567 FGRP09769 529 aa25.36■■□□□ 1.65
CAPN1-220ENST00000530567 PTPRAP18433 802 aa25.36■■□□□ 1.65
CAPN1-220ENST00000530567 RASA1P20936 1047 aa25.36■■□□□ 1.65
CAPN1-220ENST00000530567 SPRYD7Q5W111 196 aa25.36■■□□□ 1.65
CAPN1-220ENST00000530567 KIAA1211Q6ZU35 1233 aa25.36■■□□□ 1.65
CAPN1-220ENST00000530567 CCDC84Q86UT8 332 aaPredicted RBP25.36■■□□□ 1.65
CAPN1-220ENST00000530567 ERO1BQ86YB8 467 aa25.36■■□□□ 1.65
CAPN1-220ENST00000530567 CCDC102AQ96A19 550 aa25.36■■□□□ 1.65
CAPN1-220ENST00000530567 INCENPQ9NQS7 918 aa25.36■■□□□ 1.65
CAPN1-220ENST00000530567 CTNNA3Q9UI47 895 aa25.36■■□□□ 1.65
CAPN1-220ENST00000530567 U3KPZ7 1027 aaPredicted RBP25.36■■□□□ 1.65
CAPN1-220ENST00000530567 PRDM1O75626 825 aa25.35■■□□□ 1.65
CAPN1-220ENST00000530567 GH2P01242 217 aa25.35■■□□□ 1.65
CAPN1-220ENST00000530567 AKR1B1P15121 316 aa25.35■■□□□ 1.65
CAPN1-220ENST00000530567 PICK1Q9NRD5 415 aa25.35■■□□□ 1.65
CAPN1-220ENST00000530567 RBM8AQ9Y5S9 174 aaKnown RBP25.35■■□□□ 1.65
CAPN1-220ENST00000530567 SLC3A2P08195 630 aaKnown RBP25.34■■□□□ 1.65
CAPN1-220ENST00000530567 ASNSP08243 561 aa25.34■■□□□ 1.65
CAPN1-220ENST00000530567 GUCY1A2P33402 732 aa25.34■■□□□ 1.65
CAPN1-220ENST00000530567 ECE1P42892 770 aa25.34■■□□□ 1.65
CAPN1-220ENST00000530567 ABCB5Q2M3G0 1257 aa25.34■■□□□ 1.65
CAPN1-220ENST00000530567 OTUD5Q96G74 571 aa25.34■■□□□ 1.65
CAPN1-220ENST00000530567 ZIC5Q96T25 663 aa25.34■■□□□ 1.65
CAPN1-220ENST00000530567 GINM1Q9NU53 330 aa25.34■■□□□ 1.65
CAPN1-220ENST00000530567 WDR33Q9C0J8 1336 aaKnown RBP25.34■■□□□ 1.65
CAPN1-220ENST00000530567 ZNF213O14771 459 aa25.33■■□□□ 1.65
CAPN1-220ENST00000530567 ZBTB48P10074 688 aaPredicted RBP25.33■■□□□ 1.65
CAPN1-220ENST00000530567 PPATQ06203 517 aa25.33■■□□□ 1.65
CAPN1-220ENST00000530567 PDE4BQ07343 736 aa25.33■■□□□ 1.65
CAPN1-220ENST00000530567 GRM1Q13255 1194 aa25.33■■□□□ 1.65
CAPN1-220ENST00000530567 STAG1Q8WVM7 1258 aa25.33■■□□□ 1.65
CAPN1-220ENST00000530567 CCDC17Q96LX7 622 aa25.33■■□□□ 1.65
CAPN1-220ENST00000530567 AOC2O75106 756 aa25.32■■□□□ 1.64
CAPN1-220ENST00000530567 CYP21A2P08686 494 aa25.32■■□□□ 1.64
CAPN1-220ENST00000530567 MKRN3Q13064 507 aaKnown RBP25.32■■□□□ 1.64
CAPN1-220ENST00000530567 PPIL2Q13356 520 aa25.32■■□□□ 1.64
CAPN1-220ENST00000530567 IMMTQ16891 758 aaKnown RBP25.32■■□□□ 1.64
CAPN1-220ENST00000530567 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.32■■□□□ 1.64
CAPN1-220ENST00000530567 MKNK2Q9HBH9 465 aa25.32■■□□□ 1.64
CAPN1-220ENST00000530567 TAF6LQ9Y6J9 622 aa25.32■■□□□ 1.64
CAPN1-220ENST00000530567 ORC4O43929 436 aa25.31■■□□□ 1.64
CAPN1-220ENST00000530567 AKNAD1Q5T1N1 836 aa25.31■■□□□ 1.64
CAPN1-220ENST00000530567 NKX2-3Q8TAU0 364 aa25.31■■□□□ 1.64
CAPN1-220ENST00000530567 ZNF287Q9HBT7 754 aa25.31■■□□□ 1.64
CAPN1-220ENST00000530567 ZHX2Q9Y6X8 837 aa25.31■■□□□ 1.64
CAPN1-220ENST00000530567 PTPRFP10586 1907 aa25.3■■□□□ 1.64
CAPN1-220ENST00000530567 IRF6O14896 467 aa25.3■■□□□ 1.64
CAPN1-220ENST00000530567 NOGQ13253 232 aa25.3■■□□□ 1.64
CAPN1-220ENST00000530567 SEPT2Q15019 361 aa25.3■■□□□ 1.64
CAPN1-220ENST00000530567 AFG3L2Q9Y4W6 797 aa25.3■■□□□ 1.64
CAPN1-220ENST00000530567 PLIN4Q96Q06 1357 aa25.3■■□□□ 1.64
CAPN1-220ENST00000530567 NEDD4P46934 1319 aa25.3■■□□□ 1.64
CAPN1-220ENST00000530567 USP17L5A8MUK1 530 aa25.29■■□□□ 1.64
CAPN1-220ENST00000530567 MPHOSPH10O00566 681 aaKnown RBP25.29■■□□□ 1.64
CAPN1-220ENST00000530567 NECTIN1Q15223 517 aa25.29■■□□□ 1.64
CAPN1-220ENST00000530567 TMEM179Q6ZVK1 233 aa25.29■■□□□ 1.64
CAPN1-220ENST00000530567 KCNH4Q9UQ05 1017 aa25.29■■□□□ 1.64
CAPN1-220ENST00000530567 PCP11498 1178 aaKnown RBP25.29■■□□□ 1.64
CAPN1-220ENST00000530567 CLEC10AQ8IUN9 316 aa25.29■■□□□ 1.64
CAPN1-220ENST00000530567 MS4A4AQ96JQ5 239 aa25.29■■□□□ 1.64
CAPN1-220ENST00000530567 CABP5Q9NP86 173 aa25.29■■□□□ 1.64
CAPN1-220ENST00000530567 IGKV6D-41A0A0C4DH26 115 aa25.28■■□□□ 1.64
CAPN1-220ENST00000530567 REC8O95072 547 aa25.28■■□□□ 1.64
CAPN1-220ENST00000530567 RAB3GAP1Q15042 981 aa25.28■■□□□ 1.64
CAPN1-220ENST00000530567 C8orf34Q49A92 452 aa25.28■■□□□ 1.64
CAPN1-220ENST00000530567 ZNF444Q8N0Y2 327 aaPredicted RBP25.28■■□□□ 1.64
CAPN1-220ENST00000530567 WDR18Q9BV38 432 aa25.28■■□□□ 1.64
CAPN1-220ENST00000530567 RNF41Q9H4P4 317 aaPredicted RBP25.28■■□□□ 1.64
CAPN1-220ENST00000530567 SLC27A2O14975 620 aa25.27■■□□□ 1.64
CAPN1-220ENST00000530567 KIF23Q02241 960 aaPredicted RBP25.27■■□□□ 1.64
CAPN1-220ENST00000530567 FAM47AQ5JRC9 791 aa25.27■■□□□ 1.64
CAPN1-220ENST00000530567 CREB3L3Q68CJ9 461 aa25.27■■□□□ 1.64
CAPN1-220ENST00000530567 MFSD6Q6ZSS7 791 aa25.27■■□□□ 1.64
CAPN1-220ENST00000530567 STOX1Q6ZVD7 989 aa25.27■■□□□ 1.64
CAPN1-220ENST00000530567 ZNF280CQ8ND82 737 aa25.27■■□□□ 1.64
CAPN1-220ENST00000530567 TBC1D2Q9BYX2 928 aa25.27■■□□□ 1.64
CAPN1-220ENST00000530567 MAP2K2P36507 400 aa25.26■■□□□ 1.63
CAPN1-220ENST00000530567 SIAH1Q8IUQ4 282 aa25.26■■□□□ 1.63
CAPN1-220ENST00000530567 NEDD1Q8NHV4 660 aa25.26■■□□□ 1.63
CAPN1-220ENST00000530567 CXCL11O14625 94 aa25.25■■□□□ 1.63
CAPN1-220ENST00000530567 TFAP4Q01664 338 aa25.25■■□□□ 1.63
CAPN1-220ENST00000530567 SPP2Q13103 211 aa25.25■■□□□ 1.63
CAPN1-220ENST00000530567 RRP12Q5JTH9 1297 aaKnown RBP25.25■■□□□ 1.63
CAPN1-220ENST00000530567 ACER1Q8TDN7 264 aa25.25■■□□□ 1.63
CAPN1-220ENST00000530567 AS3MTQ9HBK9 375 aa25.25■■□□□ 1.63
CAPN1-220ENST00000530567 TRIM75PA6NK02 468 aa25.24■■□□□ 1.63
CAPN1-220ENST00000530567 SNAPC2Q13487 334 aa25.24■■□□□ 1.63
CAPN1-220ENST00000530567 MOGSQ13724 837 aa25.24■■□□□ 1.63
CAPN1-220ENST00000530567 LOC285556D6RIA3 1793 aa25.23■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms