RNA–Protein interactions for RNA: ENST00000530516.1

NUP98-218, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 391 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-218ENST00000530516 KIRREL1Q96J84 757 aa5.46□□□□□ -1.54
NUP98-218ENST00000530516 FRMD6Q96NE9 622 aa5.46□□□□□ -1.54
NUP98-218ENST00000530516 FAM155AB1AL88 458 aaPredicted RBP5.45□□□□□ -1.54
NUP98-218ENST00000530516 GDNFP39905 211 aa5.45□□□□□ -1.54
NUP98-218ENST00000530516 TMEM67Q5HYA8 995 aa5.45□□□□□ -1.54
NUP98-218ENST00000530516 MPZL3Q6UWV2 235 aa5.45□□□□□ -1.54
NUP98-218ENST00000530516 ANKLE2Q86XL3 938 aa5.45□□□□□ -1.54
NUP98-218ENST00000530516 MFSD4AQ8N468 514 aa5.45□□□□□ -1.54
NUP98-218ENST00000530516 FAM161BQ96MY7 647 aa5.45□□□□□ -1.54
NUP98-218ENST00000530516 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.45□□□□□ -1.54
NUP98-218ENST00000530516 PARP2Q9UGN5 583 aa5.45□□□□□ -1.54
NUP98-218ENST00000530516 PCDHA4Q9UN74 947 aa5.45□□□□□ -1.54
NUP98-218ENST00000530516 AK5Q9Y6K8 562 aa5.45□□□□□ -1.54
NUP98-218ENST00000530516 DCDC2CA8MYV0 355 aa5.44□□□□□ -1.54
NUP98-218ENST00000530516 CTSHP09668 335 aa5.44□□□□□ -1.54
NUP98-218ENST00000530516 CYP7A1P22680 504 aa5.44□□□□□ -1.54
NUP98-218ENST00000530516 EIF4BP23588 611 aaKnown RBP5.44□□□□□ -1.54
NUP98-218ENST00000530516 DAB2P98082 770 aa5.44□□□□□ -1.54
NUP98-218ENST00000530516 SFRP5Q5T4F7 317 aa5.44□□□□□ -1.54
NUP98-218ENST00000530516 HDXQ7Z353 690 aa5.44□□□□□ -1.54
NUP98-218ENST00000530516 FBXO15Q8NCQ5 510 aaPredicted RBP5.44□□□□□ -1.54
NUP98-218ENST00000530516 PRDM7Q9NQW5 492 aa5.44□□□□□ -1.54
NUP98-218ENST00000530516 RAPGEFL1Q9UHV5 662 aa5.44□□□□□ -1.54
NUP98-218ENST00000530516 KIR3DL1P43629 444 aa5.43□□□□□ -1.54
NUP98-218ENST00000530516 MEI1Q5TIA1 1274 aa5.43□□□□□ -1.54
NUP98-218ENST00000530516 PCNX4Q63HM2 1172 aa5.43□□□□□ -1.54
NUP98-218ENST00000530516 TMC4Q7Z404 712 aa5.43□□□□□ -1.54
NUP98-218ENST00000530516 C12orf40Q86WS4 652 aa5.43□□□□□ -1.54
NUP98-218ENST00000530516 CARS2Q9HA77 564 aaKnown RBP5.43□□□□□ -1.54
NUP98-218ENST00000530516 TPX2Q9ULW0 747 aaKnown RBP5.43□□□□□ -1.54
NUP98-218ENST00000530516 CSADQ9Y600 493 aa5.43□□□□□ -1.54
NUP98-218ENST00000530516 TACC3Q9Y6A5 838 aa5.43□□□□□ -1.54
NUP98-218ENST00000530516 SNCAIPQ9Y6H5 919 aa5.43□□□□□ -1.54
NUP98-218ENST00000530516 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.42□□□□□ -1.54
NUP98-218ENST00000530516 NFIBO00712 420 aa5.42□□□□□ -1.54
NUP98-218ENST00000530516 RAC2P15153 192 aa5.42□□□□□ -1.54
NUP98-218ENST00000530516 PTPN11Q06124 597 aaPredicted RBP5.42□□□□□ -1.54
NUP98-218ENST00000530516 SYDE1Q6ZW31 735 aaPredicted RBP5.42□□□□□ -1.54
NUP98-218ENST00000530516 CILP2Q8IUL8 1156 aa5.42□□□□□ -1.54
NUP98-218ENST00000530516 LIN37Q96GY3 246 aaPredicted RBP5.42□□□□□ -1.54
NUP98-218ENST00000530516 WNT10AQ9GZT5 417 aa5.42□□□□□ -1.54
NUP98-218ENST00000530516 SEMA3GQ9NS98 782 aa5.42□□□□□ -1.54
NUP98-218ENST00000530516 TTF2Q9UNY4 1162 aaKnown RBP5.42□□□□□ -1.54
NUP98-218ENST00000530516 FGD1P98174 961 aa5.41□□□□□ -1.54
NUP98-218ENST00000530516 PSMD2Q13200 908 aa5.41□□□□□ -1.54
NUP98-218ENST00000530516 SV2BQ7L1I2 683 aa5.41□□□□□ -1.54
NUP98-218ENST00000530516 TMPRSS7Q7RTY8 843 aa5.41□□□□□ -1.54
NUP98-218ENST00000530516 HID1Q8IV36 788 aa5.41□□□□□ -1.54
NUP98-218ENST00000530516 HOMEZQ8IX15 550 aa5.41□□□□□ -1.54
NUP98-218ENST00000530516 LRRC56Q8IYG6 542 aaPredicted RBP5.41□□□□□ -1.54
NUP98-218ENST00000530516 GAL3ST3Q96A11 431 aa5.41□□□□□ -1.54
NUP98-218ENST00000530516 HSPA12BQ96MM6 686 aa5.41□□□□□ -1.54
NUP98-218ENST00000530516 ALPK1Q96QP1 1244 aa5.41□□□□□ -1.54
NUP98-218ENST00000530516 SLITRK5O94991 958 aa5.4□□□□□ -1.54
NUP98-218ENST00000530516 ERCC3P19447 782 aa5.4□□□□□ -1.54
NUP98-218ENST00000530516 CFPP27918 469 aa5.4□□□□□ -1.54
NUP98-218ENST00000530516 SLBPQ14493 270 aaKnown RBP eCLIP5.4□□□□□ -1.54
NUP98-218ENST00000530516 LCE4AQ5TA78 99 aa5.4□□□□□ -1.54
NUP98-218ENST00000530516 PIWIL2Q8TC59 973 aaKnown RBP5.4□□□□□ -1.54
NUP98-218ENST00000530516 MIPEPQ99797 713 aa5.4□□□□□ -1.54
NUP98-218ENST00000530516 ATP13A1Q9HD20 1204 aa5.4□□□□□ -1.54
NUP98-218ENST00000530516 ST14Q9Y5Y6 855 aa5.4□□□□□ -1.54
NUP98-218ENST00000530516 CAPN6Q9Y6Q1 641 aa5.4□□□□□ -1.54
NUP98-218ENST00000530516 PRAMEF27A3QJZ7 478 aa5.39□□□□□ -1.55
NUP98-218ENST00000530516 ETF1P62495 437 aaKnown RBP5.39□□□□□ -1.55
NUP98-218ENST00000530516 RPS26P62854 115 aaKnown RBP5.39□□□□□ -1.55
NUP98-218ENST00000530516 CCDC85BQ15834 202 aaPredicted RBP5.39□□□□□ -1.55
NUP98-218ENST00000530516 FYB2Q5VWT5 728 aa5.39□□□□□ -1.55
NUP98-218ENST00000530516 DIEXFQ68CQ4 756 aaKnown RBP5.39□□□□□ -1.55
NUP98-218ENST00000530516 TTBK2Q6IQ55 1244 aa5.39□□□□□ -1.55
NUP98-218ENST00000530516 LETMD1Q6P1Q0 360 aa5.39□□□□□ -1.55
NUP98-218ENST00000530516 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.39□□□□□ -1.55
NUP98-218ENST00000530516 PRR23BQ6ZRT6 265 aa5.39□□□□□ -1.55
NUP98-218ENST00000530516 UBE3DQ7Z6J8 389 aa5.39□□□□□ -1.55
NUP98-218ENST00000530516 CST3P01034 146 aaPredicted RBP5.38□□□□□ -1.55
NUP98-218ENST00000530516 TMEM253P0C7T8 217 aa5.38□□□□□ -1.55
NUP98-218ENST00000530516 CDK8P49336 464 aa5.38□□□□□ -1.55
NUP98-218ENST00000530516 XPCQ01831 940 aaPredicted RBP5.38□□□□□ -1.55
NUP98-218ENST00000530516 INPP5AQ14642 412 aa5.38□□□□□ -1.55
NUP98-218ENST00000530516 CDKAL1Q5VV42 579 aa5.38□□□□□ -1.55
NUP98-218ENST00000530516 LRFN4Q6PJG9 635 aa5.38□□□□□ -1.55
NUP98-218ENST00000530516 AMIGO3Q86WK7 504 aa5.38□□□□□ -1.55
NUP98-218ENST00000530516 C1QL4Q86Z23 238 aa5.38□□□□□ -1.55
NUP98-218ENST00000530516 PLPPR2Q96GM1 343 aa5.38□□□□□ -1.55
NUP98-218ENST00000530516 EPB41L4BQ9H329 900 aa5.38□□□□□ -1.55
NUP98-218ENST00000530516 C19orf73Q9NVV2 129 aa5.38□□□□□ -1.55
NUP98-218ENST00000530516 PCDHB5Q9Y5E4 795 aa5.38□□□□□ -1.55
NUP98-218ENST00000530516 USP31Q70CQ4 1352 aa5.38□□□□□ -1.55
NUP98-218ENST00000530516 ZBTB7CA1YPR0 619 aa5.37□□□□□ -1.55
NUP98-218ENST00000530516 H3BS24 57 aa5.37□□□□□ -1.55
NUP98-218ENST00000530516 MED14OSP0DP75 135 aa5.37□□□□□ -1.55
NUP98-218ENST00000530516 ZSCAN22P10073 491 aaPredicted RBP5.37□□□□□ -1.55
NUP98-218ENST00000530516 SRFP11831 508 aa5.37□□□□□ -1.55
NUP98-218ENST00000530516 LMNB1P20700 586 aa5.37□□□□□ -1.55
NUP98-218ENST00000530516 ETV3P41162 512 aa5.37□□□□□ -1.55
NUP98-218ENST00000530516 ST13P50502 369 aaKnown RBP5.37□□□□□ -1.55
NUP98-218ENST00000530516 TAF1CQ15572 869 aaPredicted RBP5.37□□□□□ -1.55
NUP98-218ENST00000530516 MAP3K11Q16584 847 aa5.37□□□□□ -1.55
NUP98-218ENST00000530516 TMCO4Q5TGY1 634 aa5.37□□□□□ -1.55
NUP98-218ENST00000530516 AGMOQ6ZNB7 445 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms