RNA–Protein interactions for RNA: ENST00000530253.5

CCDC90B-217, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 776 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-217ENST00000530253 CLP1Q92989 425 aaKnown RBP11.84□□□□□ -0.51
CCDC90B-217ENST00000530253 FAM46AQ96IP4 442 aaKnown RBP11.84□□□□□ -0.51
CCDC90B-217ENST00000530253 SEC31BQ9NQW1 1179 aa11.84□□□□□ -0.51
CCDC90B-217ENST00000530253 POLKQ9UBT6 870 aa11.84□□□□□ -0.51
CCDC90B-217ENST00000530253 TRPC5Q9UL62 973 aaPredicted RBP11.84□□□□□ -0.51
CCDC90B-217ENST00000530253 COL3A1P02461 1466 aaPredicted RBP11.83□□□□□ -0.52
CCDC90B-217ENST00000530253 FLT4P35916 1363 aa11.83□□□□□ -0.52
CCDC90B-217ENST00000530253 RGPD5Q99666 1765 aa11.83□□□□□ -0.52
CCDC90B-217ENST00000530253 TGFB1P01137 390 aa11.83□□□□□ -0.52
CCDC90B-217ENST00000530253 HOXC9P31274 260 aa11.83□□□□□ -0.52
CCDC90B-217ENST00000530253 IP6K1Q92551 441 aa11.83□□□□□ -0.52
CCDC90B-217ENST00000530253 MYRFLQ96LU7 910 aa11.83□□□□□ -0.52
CCDC90B-217ENST00000530253 DBNDD2Q9BQY9 259 aa11.83□□□□□ -0.52
CCDC90B-217ENST00000530253 CARD10Q9BWT7 1032 aa11.83□□□□□ -0.52
CCDC90B-217ENST00000530253 BTG4Q9NY30 223 aa11.83□□□□□ -0.52
CCDC90B-217ENST00000530253 GLI3P10071 1580 aa11.83□□□□□ -0.52
CCDC90B-217ENST00000530253 INSRP06213 1382 aa11.82□□□□□ -0.52
CCDC90B-217ENST00000530253 TNNT2P45379 298 aaPredicted RBP11.82□□□□□ -0.52
CCDC90B-217ENST00000530253 RNF43Q68DV7 783 aa11.82□□□□□ -0.52
CCDC90B-217ENST00000530253 UNC5CLQ8IV45 518 aa11.82□□□□□ -0.52
CCDC90B-217ENST00000530253 CEP120Q8N960 986 aa11.82□□□□□ -0.52
CCDC90B-217ENST00000530253 ADAM19Q9H013 955 aa11.82□□□□□ -0.52
CCDC90B-217ENST00000530253 C7orf69Q9H7B7 122 aa11.82□□□□□ -0.52
CCDC90B-217ENST00000530253 MAP2P11137 1827 aaKnown RBP11.81□□□□□ -0.52
CCDC90B-217ENST00000530253 ZBTB7CA1YPR0 619 aa11.81□□□□□ -0.52
CCDC90B-217ENST00000530253 H3BRJ5 948 aa11.81□□□□□ -0.52
CCDC90B-217ENST00000530253 SART1O43290 800 aaKnown RBP11.81□□□□□ -0.52
CCDC90B-217ENST00000530253 EPHA1P21709 976 aa11.81□□□□□ -0.52
CCDC90B-217ENST00000530253 CDC25BP30305 580 aa11.81□□□□□ -0.52
CCDC90B-217ENST00000530253 TXKP42681 527 aa11.81□□□□□ -0.52
CCDC90B-217ENST00000530253 ANKRD34AQ69YU3 496 aa11.81□□□□□ -0.52
CCDC90B-217ENST00000530253 KIAA1211Q6ZU35 1233 aa11.81□□□□□ -0.52
CCDC90B-217ENST00000530253 ZNF438Q7Z4V0 828 aa11.81□□□□□ -0.52
CCDC90B-217ENST00000530253 ZDHHC13Q8IUH4 622 aa11.81□□□□□ -0.52
CCDC90B-217ENST00000530253 ELP3Q9H9T3 547 aa11.81□□□□□ -0.52
CCDC90B-217ENST00000530253 KCNK4Q9NYG8 393 aa11.81□□□□□ -0.52
CCDC90B-217ENST00000530253 NCAPD2Q15021 1401 aa11.8□□□□□ -0.52
CCDC90B-217ENST00000530253 BTBD11A6QL63 1104 aa11.8□□□□□ -0.52
CCDC90B-217ENST00000530253 PCSK2P16519 638 aa11.8□□□□□ -0.52
CCDC90B-217ENST00000530253 PPP2R1AP30153 589 aa11.8□□□□□ -0.52
CCDC90B-217ENST00000530253 CNGB1Q14028 1251 aaPredicted RBP11.8□□□□□ -0.52
CCDC90B-217ENST00000530253 VPS72Q15906 364 aa11.8□□□□□ -0.52
CCDC90B-217ENST00000530253 HSP90AB2PQ58FF8 381 aa11.8□□□□□ -0.52
CCDC90B-217ENST00000530253 TMEM164Q5U3C3 297 aa11.8□□□□□ -0.52
CCDC90B-217ENST00000530253 OSGEPQ9NPF4 335 aa11.8□□□□□ -0.52
CCDC90B-217ENST00000530253 BRWD3Q6RI45 1802 aa11.8□□□□□ -0.52
CCDC90B-217ENST00000530253 FAM208AQ9UK61 1670 aaKnown RBP11.8□□□□□ -0.52
CCDC90B-217ENST00000530253 WDR17Q8IZU2 1322 aa11.8□□□□□ -0.52
CCDC90B-217ENST00000530253 CRB1P82279 1406 aa11.79□□□□□ -0.52
CCDC90B-217ENST00000530253 TM4SF5O14894 197 aa11.79□□□□□ -0.52
CCDC90B-217ENST00000530253 AMPHP49418 695 aa11.79□□□□□ -0.52
CCDC90B-217ENST00000530253 CAPN12Q6ZSI9 719 aa11.79□□□□□ -0.52
CCDC90B-217ENST00000530253 CLEC10AQ8IUN9 316 aa11.79□□□□□ -0.52
CCDC90B-217ENST00000530253 RNF208Q9H0X6 261 aa11.79□□□□□ -0.52
CCDC90B-217ENST00000530253 PRKRIP1Q9H875 184 aaPredicted RBP11.79□□□□□ -0.52
CCDC90B-217ENST00000530253 HIF3AQ9Y2N7 669 aa11.79□□□□□ -0.52
CCDC90B-217ENST00000530253 CCDC9Q9Y3X0 531 aaKnown RBP11.79□□□□□ -0.52
CCDC90B-217ENST00000530253 RGPD1P0DJD0 1748 aa11.79□□□□□ -0.52
CCDC90B-217ENST00000530253 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.78□□□□□ -0.52
CCDC90B-217ENST00000530253 GP2P55259 537 aaKnown RBP11.78□□□□□ -0.52
CCDC90B-217ENST00000530253 RALBP1Q15311 655 aa11.78□□□□□ -0.52
CCDC90B-217ENST00000530253 TRIM42Q8IWZ5 723 aa11.78□□□□□ -0.52
CCDC90B-217ENST00000530253 TTC16Q8NEE8 873 aa11.78□□□□□ -0.52
CCDC90B-217ENST00000530253 ANKRD24Q8TF21 1146 aa11.78□□□□□ -0.52
CCDC90B-217ENST00000530253 FOXD4L4Q8WXT5 416 aaPredicted RBP11.78□□□□□ -0.52
CCDC90B-217ENST00000530253 SPATA31A1Q5TZJ5 1347 aa11.78□□□□□ -0.52
CCDC90B-217ENST00000530253 SPATA31A5Q5VU36 1347 aa11.78□□□□□ -0.52
CCDC90B-217ENST00000530253 SPATA31A7Q8IWB4 1347 aa11.78□□□□□ -0.52
CCDC90B-217ENST00000530253 THSD7AQ9UPZ6 1657 aa11.78□□□□□ -0.52
CCDC90B-217ENST00000530253 DISP2A7MBM2 1401 aa11.77□□□□□ -0.52
CCDC90B-217ENST00000530253 WNK3Q9BYP7 1800 aa11.77□□□□□ -0.52
CCDC90B-217ENST00000530253 CYP2E1P05181 493 aaPredicted RBP11.77□□□□□ -0.53
CCDC90B-217ENST00000530253 MTHFSP49914 203 aa11.77□□□□□ -0.53
CCDC90B-217ENST00000530253 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.77□□□□□ -0.53
CCDC90B-217ENST00000530253 FAM20CQ8IXL6 584 aa11.77□□□□□ -0.53
CCDC90B-217ENST00000530253 POP1Q99575 1024 aaKnown RBP11.77□□□□□ -0.53
CCDC90B-217ENST00000530253 SH2B1Q9NRF2 756 aaPredicted RBP11.77□□□□□ -0.53
CCDC90B-217ENST00000530253 ZBTB39O15060 712 aa11.76□□□□□ -0.53
CCDC90B-217ENST00000530253 PPM1GO15355 546 aaPredicted RBP11.76□□□□□ -0.53
CCDC90B-217ENST00000530253 ARL4DP49703 201 aa11.76□□□□□ -0.53
CCDC90B-217ENST00000530253 EIF4A2Q14240 407 aaKnown RBP11.76□□□□□ -0.53
CCDC90B-217ENST00000530253 UBASH3BQ8TF42 649 aa11.76□□□□□ -0.53
CCDC90B-217ENST00000530253 PMEPA1Q969W9 287 aa11.76□□□□□ -0.53
CCDC90B-217ENST00000530253 FAM83CQ9BQN1 747 aa11.76□□□□□ -0.53
CCDC90B-217ENST00000530253 TMEM63CQ9P1W3 806 aa11.76□□□□□ -0.53
CCDC90B-217ENST00000530253 RGPD2P0DJD1 1756 aa11.76□□□□□ -0.53
CCDC90B-217ENST00000530253 HMX2A2RU54 273 aa11.75□□□□□ -0.53
CCDC90B-217ENST00000530253 MED26O95402 600 aa11.75□□□□□ -0.53
CCDC90B-217ENST00000530253 SPINK2P20155 84 aa11.75□□□□□ -0.53
CCDC90B-217ENST00000530253 FDX2Q6P4F2 183 aa11.75□□□□□ -0.53
CCDC90B-217ENST00000530253 XKR5Q6UX68 686 aa11.75□□□□□ -0.53
CCDC90B-217ENST00000530253 KLHDC7BQ96G42 594 aa11.75□□□□□ -0.53
CCDC90B-217ENST00000530253 KCNF1Q9H3M0 494 aa11.75□□□□□ -0.53
CCDC90B-217ENST00000530253 SRCAPQ6ZRS2 3230 aa11.75□□□□□ -0.53
CCDC90B-217ENST00000530253 MYBBP1AQ9BQG0 1328 aaKnown RBP11.75□□□□□ -0.53
CCDC90B-217ENST00000530253 ADAM11O75078 769 aa11.74□□□□□ -0.53
CCDC90B-217ENST00000530253 CES1P23141 567 aa11.74□□□□□ -0.53
CCDC90B-217ENST00000530253 IL13P35225 146 aa11.74□□□□□ -0.53
CCDC90B-217ENST00000530253 LTV1Q96GA3 475 aaPredicted RBP11.74□□□□□ -0.53
CCDC90B-217ENST00000530253 KANSL3Q9P2N6 904 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms