RNA–Protein interactions for RNA: ENST00000529986.5

CTNND1-223, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-223ENST00000529986 AGTPBP1Q9UPW5 1226 aa8.49□□□□□ -1.05
CTNND1-223ENST00000529986 EFCAB8A8MWE9 144 aa8.49□□□□□ -1.05
CTNND1-223ENST00000529986 ANKRD65E5RJM6 399 aa8.49□□□□□ -1.05
CTNND1-223ENST00000529986 HIP1RO75146 1068 aa8.49□□□□□ -1.05
CTNND1-223ENST00000529986 PPFIA4O75335 1185 aa8.49□□□□□ -1.05
CTNND1-223ENST00000529986 IL15P40933 162 aaPredicted RBP8.49□□□□□ -1.05
CTNND1-223ENST00000529986 COG7P83436 770 aa8.49□□□□□ -1.05
CTNND1-223ENST00000529986 SNCBQ16143 134 aa8.49□□□□□ -1.05
CTNND1-223ENST00000529986 G2E3Q7L622 706 aa8.49□□□□□ -1.05
CTNND1-223ENST00000529986 RNF168Q8IYW5 571 aaPredicted RBP8.49□□□□□ -1.05
CTNND1-223ENST00000529986 MLKLQ8NB16 471 aa8.49□□□□□ -1.05
CTNND1-223ENST00000529986 PHKBQ93100 1093 aa8.49□□□□□ -1.05
CTNND1-223ENST00000529986 MAGEB6P1A0A0J9YX57 407 aa8.49□□□□□ -1.05
CTNND1-223ENST00000529986 SNRPA1P09661 255 aaKnown RBP8.49□□□□□ -1.05
CTNND1-223ENST00000529986 GNAQP50148 359 aa8.49□□□□□ -1.05
CTNND1-223ENST00000529986 POSTNQ15063 836 aa8.49□□□□□ -1.05
CTNND1-223ENST00000529986 FAM207AQ9NSI2 230 aaPredicted RBP8.49□□□□□ -1.05
CTNND1-223ENST00000529986 TBC1D7Q9P0N9 293 aa8.49□□□□□ -1.05
CTNND1-223ENST00000529986 INSRP06213 1382 aa8.49□□□□□ -1.05
CTNND1-223ENST00000529986 DENND2CQ68D51 928 aa8.49□□□□□ -1.05
CTNND1-223ENST00000529986 CCDC105Q8IYK2 499 aa8.49□□□□□ -1.05
CTNND1-223ENST00000529986 PHACTR3Q96KR7 559 aa8.49□□□□□ -1.05
CTNND1-223ENST00000529986 JAG2Q9Y219 1238 aa8.49□□□□□ -1.05
CTNND1-223ENST00000529986 RTL9Q8NET4 1388 aa8.49□□□□□ -1.05
CTNND1-223ENST00000529986 RGS16O15492 202 aaPredicted RBP8.49□□□□□ -1.05
CTNND1-223ENST00000529986 ZMYND10O75800 440 aa8.49□□□□□ -1.05
CTNND1-223ENST00000529986 HLA-DOAP06340 250 aa8.49□□□□□ -1.05
CTNND1-223ENST00000529986 STX2P32856 288 aa8.49□□□□□ -1.05
CTNND1-223ENST00000529986 ETF1P62495 437 aaKnown RBP8.49□□□□□ -1.05
CTNND1-223ENST00000529986 IFT88Q13099 833 aa8.49□□□□□ -1.05
CTNND1-223ENST00000529986 PPP2R5AQ15172 486 aa8.49□□□□□ -1.05
CTNND1-223ENST00000529986 RPS6KA1Q15418 735 aa8.49□□□□□ -1.05
CTNND1-223ENST00000529986 PHLDB2Q86SQ0 1253 aa8.49□□□□□ -1.05
CTNND1-223ENST00000529986 MAK16Q9BXY0 300 aaKnown RBP8.49□□□□□ -1.05
CTNND1-223ENST00000529986 BICC1Q9H694 974 aaKnown RBP8.49□□□□□ -1.05
CTNND1-223ENST00000529986 NLRC4Q9NPP4 1024 aa8.49□□□□□ -1.05
CTNND1-223ENST00000529986 KDM5AP29375 1690 aaKnown RBP8.48□□□□□ -1.05
CTNND1-223ENST00000529986 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.48□□□□□ -1.05
CTNND1-223ENST00000529986 PPP2R5DQ14738 602 aa8.48□□□□□ -1.05
CTNND1-223ENST00000529986 RILPL1Q5EBL4 403 aa8.48□□□□□ -1.05
CTNND1-223ENST00000529986 RASIP1Q5U651 963 aa8.48□□□□□ -1.05
CTNND1-223ENST00000529986 ANKRD20A3Q5VUR7 823 aa8.48□□□□□ -1.05
CTNND1-223ENST00000529986 DIS3L2Q8IYB7 885 aaKnown RBP8.48□□□□□ -1.05
CTNND1-223ENST00000529986 KLHDC4Q8TBB5 520 aa8.48□□□□□ -1.05
CTNND1-223ENST00000529986 MORC4Q8TE76 937 aa8.48□□□□□ -1.05
CTNND1-223ENST00000529986 NELFBQ8WX92 580 aa8.48□□□□□ -1.05
CTNND1-223ENST00000529986 RRP36Q96EU6 259 aaKnown RBP8.48□□□□□ -1.05
CTNND1-223ENST00000529986 JPH2Q9BR39 696 aaPredicted RBP8.48□□□□□ -1.05
CTNND1-223ENST00000529986 IFIH1Q9BYX4 1025 aaKnown RBP8.48□□□□□ -1.05
CTNND1-223ENST00000529986 CTTNBP2NLQ9P2B4 639 aa8.48□□□□□ -1.05
CTNND1-223ENST00000529986 SMIM24O75264 130 aa8.48□□□□□ -1.05
CTNND1-223ENST00000529986 ALDH1L1O75891 902 aa8.48□□□□□ -1.05
CTNND1-223ENST00000529986 SETSIPP0DME0 302 aa8.48□□□□□ -1.05
CTNND1-223ENST00000529986 NGLY1Q96IV0 654 aa8.48□□□□□ -1.05
CTNND1-223ENST00000529986 RILPQ96NA2 401 aa8.48□□□□□ -1.05
CTNND1-223ENST00000529986 TRIM4Q9C037 500 aa8.48□□□□□ -1.05
CTNND1-223ENST00000529986 USTQ9Y2C2 406 aa8.48□□□□□ -1.05
CTNND1-223ENST00000529986 BUB1O43683 1085 aa8.48□□□□□ -1.05
CTNND1-223ENST00000529986 CUTAO60888 179 aa8.48□□□□□ -1.05
CTNND1-223ENST00000529986 DYMQ7RTS9 669 aa8.48□□□□□ -1.05
CTNND1-223ENST00000529986 VEZTQ9HBM0 779 aa8.48□□□□□ -1.05
CTNND1-223ENST00000529986 PKD2L1Q9P0L9 805 aa8.48□□□□□ -1.05
CTNND1-223ENST00000529986 WWC3Q9ULE0 1092 aa8.48□□□□□ -1.05
CTNND1-223ENST00000529986 ODF2LQ9ULJ1 636 aa8.48□□□□□ -1.05
CTNND1-223ENST00000529986 KCNJ14Q9UNX9 436 aa8.48□□□□□ -1.05
CTNND1-223ENST00000529986 FAN1Q9Y2M0 1017 aa8.48□□□□□ -1.05
CTNND1-223ENST00000529986 GMNNO75496 209 aa8.48□□□□□ -1.05
CTNND1-223ENST00000529986 EPB41P11171 864 aaKnown RBP8.48□□□□□ -1.05
CTNND1-223ENST00000529986 RAD51AP2Q09MP3 1159 aa8.48□□□□□ -1.05
CTNND1-223ENST00000529986 RRAGAQ7L523 313 aa8.48□□□□□ -1.05
CTNND1-223ENST00000529986 DPH5Q9H2P9 285 aa8.48□□□□□ -1.05
CTNND1-223ENST00000529986 PFDN4Q9NQP4 134 aa8.48□□□□□ -1.05
CTNND1-223ENST00000529986 MCM9Q9NXL9 1143 aa8.48□□□□□ -1.05
CTNND1-223ENST00000529986 RABGAP1Q9Y3P9 1069 aa8.48□□□□□ -1.05
CTNND1-223ENST00000529986 hCG_1642624A0A1W2PR95 340 aa8.47□□□□□ -1.05
CTNND1-223ENST00000529986 ARHGAP42A6NI28 874 aa8.47□□□□□ -1.05
CTNND1-223ENST00000529986 GOLGA8KD6RF30 607 aa8.47□□□□□ -1.05
CTNND1-223ENST00000529986 RNF40O75150 1001 aa8.47□□□□□ -1.05
CTNND1-223ENST00000529986 ZNF827Q17R98 1081 aa8.47□□□□□ -1.05
CTNND1-223ENST00000529986 PEX26Q7Z412 305 aa8.47□□□□□ -1.05
CTNND1-223ENST00000529986 ADAT2Q7Z6V5 191 aaKnown RBP8.47□□□□□ -1.05
CTNND1-223ENST00000529986 C2CD5Q86YS7 1000 aa8.47□□□□□ -1.05
CTNND1-223ENST00000529986 ARHGAP24Q8N264 748 aa8.47□□□□□ -1.05
CTNND1-223ENST00000529986 UBL4BQ8N7F7 174 aa8.47□□□□□ -1.05
CTNND1-223ENST00000529986 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.47□□□□□ -1.05
CTNND1-223ENST00000529986 TBC1D8O95759 1140 aa8.47□□□□□ -1.05
CTNND1-223ENST00000529986 TIMM10P62072 90 aa8.47□□□□□ -1.05
CTNND1-223ENST00000529986 SP4Q02446 784 aa8.47□□□□□ -1.05
CTNND1-223ENST00000529986 KLHL30Q0D2K2 578 aa8.47□□□□□ -1.05
CTNND1-223ENST00000529986 ME3Q16798 604 aa8.47□□□□□ -1.05
CTNND1-223ENST00000529986 MTHFSDQ2M296 383 aaKnown RBP8.47□□□□□ -1.05
CTNND1-223ENST00000529986 FAM71BQ8TC56 605 aa8.47□□□□□ -1.05
CTNND1-223ENST00000529986 SERTAD1Q9UHV2 236 aa8.47□□□□□ -1.05
CTNND1-223ENST00000529986 V9GY48 417 aaPredicted RBP8.47□□□□□ -1.05
CTNND1-223ENST00000529986 PLXNC1O60486 1568 aa8.47□□□□□ -1.05
CTNND1-223ENST00000529986 SGSM2O43147 1006 aa8.47□□□□□ -1.05
CTNND1-223ENST00000529986 PFDN1O60925 122 aa8.47□□□□□ -1.05
CTNND1-223ENST00000529986 MTMR3Q13615 1198 aa8.47□□□□□ -1.05
CTNND1-223ENST00000529986 CAPN12Q6ZSI9 719 aa8.47□□□□□ -1.05
CTNND1-223ENST00000529986 IFNL2Q8IZJ0 200 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms