RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 PLXNB2O15031 1838 aa14.46□□□□□ -0.09
AMBRA1-207ENST00000529553 ASNSP08243 561 aa14.46□□□□□ -0.09
AMBRA1-207ENST00000529553 PHKA1P46020 1223 aa14.46□□□□□ -0.09
AMBRA1-207ENST00000529553 MTMR2Q13614 643 aa14.46□□□□□ -0.09
AMBRA1-207ENST00000529553 RRP1BQ14684 758 aaKnown RBP14.46□□□□□ -0.09
AMBRA1-207ENST00000529553 ATXN2LQ8WWM7 1075 aaKnown RBP14.46□□□□□ -0.09
AMBRA1-207ENST00000529553 BADQ92934 168 aa14.46□□□□□ -0.09
AMBRA1-207ENST00000529553 USP44Q9H0E7 712 aa14.46□□□□□ -0.09
AMBRA1-207ENST00000529553 PORCNQ9H237 461 aa14.46□□□□□ -0.09
AMBRA1-207ENST00000529553 ABCF2Q9UG63 623 aa14.46□□□□□ -0.09
AMBRA1-207ENST00000529553 DOCK2Q92608 1830 aa14.45□□□□□ -0.1
AMBRA1-207ENST00000529553 SLC15A5A6NIM6 579 aa14.45□□□□□ -0.1
AMBRA1-207ENST00000529553 FAM196BA6NMK8 535 aa14.45□□□□□ -0.1
AMBRA1-207ENST00000529553 USP17L10C9JJH3 530 aa14.45□□□□□ -0.1
AMBRA1-207ENST00000529553 LDHCP07864 332 aa14.45□□□□□ -0.1
AMBRA1-207ENST00000529553 HOXC6P09630 235 aa14.45□□□□□ -0.1
AMBRA1-207ENST00000529553 CCNA1P78396 465 aa14.45□□□□□ -0.1
AMBRA1-207ENST00000529553 C1orf53Q5VUE5 145 aa14.45□□□□□ -0.1
AMBRA1-207ENST00000529553 CCDC102BQ68D86 513 aa14.45□□□□□ -0.1
AMBRA1-207ENST00000529553 DNAH12Q6ZR08 3092 aa14.45□□□□□ -0.1
AMBRA1-207ENST00000529553 PI4KBQ9UBF8 816 aa14.45□□□□□ -0.1
AMBRA1-207ENST00000529553 ATP11BQ9Y2G3 1177 aa14.45□□□□□ -0.1
AMBRA1-207ENST00000529553 RABGAP1Q9Y3P9 1069 aa14.45□□□□□ -0.1
AMBRA1-207ENST00000529553 LOC285556D6RIA3 1793 aa14.45□□□□□ -0.1
AMBRA1-207ENST00000529553 PEX10O60683 326 aa14.44□□□□□ -0.1
AMBRA1-207ENST00000529553 GSTO1P78417 241 aa14.44□□□□□ -0.1
AMBRA1-207ENST00000529553 ATP2B2Q01814 1243 aa14.44□□□□□ -0.1
AMBRA1-207ENST00000529553 SNX17Q15036 470 aa14.44□□□□□ -0.1
AMBRA1-207ENST00000529553 DHX36Q9H2U1 1008 aaKnown RBP14.44□□□□□ -0.1
AMBRA1-207ENST00000529553 CWC22Q9HCG8 908 aaKnown RBP14.44□□□□□ -0.1
AMBRA1-207ENST00000529553 CDH23Q9H251 3354 aa14.43□□□□□ -0.1
AMBRA1-207ENST00000529553 IGHA2P01877 340 aa14.43□□□□□ -0.1
AMBRA1-207ENST00000529553 PTPREP23469 700 aa14.43□□□□□ -0.1
AMBRA1-207ENST00000529553 CNGA1P29973 690 aa14.43□□□□□ -0.1
AMBRA1-207ENST00000529553 IL15P40933 162 aaPredicted RBP14.43□□□□□ -0.1
AMBRA1-207ENST00000529553 MECOMQ03112 1051 aa14.43□□□□□ -0.1
AMBRA1-207ENST00000529553 ERICH6Q7L0X2 663 aa14.43□□□□□ -0.1
AMBRA1-207ENST00000529553 FLRT1Q9NZU1 646 aa14.43□□□□□ -0.1
AMBRA1-207ENST00000529553 ARIH1Q9Y4X5 557 aaPredicted RBP14.43□□□□□ -0.1
AMBRA1-207ENST00000529553 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.42□□□□□ -0.1
AMBRA1-207ENST00000529553 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.42□□□□□ -0.1
AMBRA1-207ENST00000529553 KBTBD13C9JR72 458 aa14.42□□□□□ -0.1
AMBRA1-207ENST00000529553 HOXD11P31277 338 aaPredicted RBP14.42□□□□□ -0.1
AMBRA1-207ENST00000529553 RASGRF1Q13972 1273 aa14.42□□□□□ -0.1
AMBRA1-207ENST00000529553 GRIN2CQ14957 1233 aa14.42□□□□□ -0.1
AMBRA1-207ENST00000529553 POTEEQ6S8J3 1075 aa14.42□□□□□ -0.1
AMBRA1-207ENST00000529553 METTL16Q86W50 562 aaKnown RBP14.42□□□□□ -0.1
AMBRA1-207ENST00000529553 FOXP4Q8IVH2 680 aaPredicted RBP14.42□□□□□ -0.1
AMBRA1-207ENST00000529553 PAGR1Q9BTK6 254 aa14.42□□□□□ -0.1
AMBRA1-207ENST00000529553 PRDM5Q9NQX1 630 aaPredicted RBP14.42□□□□□ -0.1
AMBRA1-207ENST00000529553 TACC3Q9Y6A5 838 aa14.42□□□□□ -0.1
AMBRA1-207ENST00000529553 PTPRCP08575 1304 aa14.41□□□□□ -0.1
AMBRA1-207ENST00000529553 TRIM43BA6NCK2 446 aa14.41□□□□□ -0.1
AMBRA1-207ENST00000529553 GJC2Q5T442 439 aaPredicted RBP14.41□□□□□ -0.1
AMBRA1-207ENST00000529553 USP17L2Q6R6M4 530 aa14.41□□□□□ -0.1
AMBRA1-207ENST00000529553 ZNF384Q8TF68 577 aa14.41□□□□□ -0.1
AMBRA1-207ENST00000529553 TRIM43Q96BQ3 446 aaPredicted RBP14.41□□□□□ -0.1
AMBRA1-207ENST00000529553 ASB2Q96Q27 587 aa14.41□□□□□ -0.1
AMBRA1-207ENST00000529553 PDLIM7Q9NR12 457 aa14.41□□□□□ -0.1
AMBRA1-207ENST00000529553 EMILIN3Q9NT22 766 aa14.41□□□□□ -0.1
AMBRA1-207ENST00000529553 RAPGEFL1Q9UHV5 662 aa14.41□□□□□ -0.1
AMBRA1-207ENST00000529553 USP17L15C9J2P7 530 aa14.4□□□□□ -0.1
AMBRA1-207ENST00000529553 USP17L13C9JLJ4 530 aa14.4□□□□□ -0.1
AMBRA1-207ENST00000529553 USP17L11C9JVI0 530 aa14.4□□□□□ -0.1
AMBRA1-207ENST00000529553 USP17L18D6R9N7 530 aa14.4□□□□□ -0.1
AMBRA1-207ENST00000529553 USP17L22D6RA61 530 aa14.4□□□□□ -0.1
AMBRA1-207ENST00000529553 USP17L17D6RBQ6 530 aa14.4□□□□□ -0.1
AMBRA1-207ENST00000529553 USP17L19D6RCP7 530 aa14.4□□□□□ -0.1
AMBRA1-207ENST00000529553 USP17L20D6RJB6 530 aa14.4□□□□□ -0.1
AMBRA1-207ENST00000529553 USP17L24Q0WX57 530 aa14.4□□□□□ -0.1
AMBRA1-207ENST00000529553 MAP3K12Q12852 859 aa14.4□□□□□ -0.1
AMBRA1-207ENST00000529553 GRB14Q14449 540 aa14.4□□□□□ -0.1
AMBRA1-207ENST00000529553 TRIM60Q495X7 471 aa14.4□□□□□ -0.1
AMBRA1-207ENST00000529553 AKNAD1Q5T1N1 836 aa14.4□□□□□ -0.1
AMBRA1-207ENST00000529553 LBX2Q6XYB7 198 aa14.4□□□□□ -0.1
AMBRA1-207ENST00000529553 USP38Q8NB14 1042 aa14.4□□□□□ -0.1
AMBRA1-207ENST00000529553 NSUN4Q96CB9 384 aaKnown RBP14.4□□□□□ -0.1
AMBRA1-207ENST00000529553 RNPC3Q96LT9 517 aaKnown RBP14.4□□□□□ -0.1
AMBRA1-207ENST00000529553 IVNS1ABPQ9Y6Y0 642 aa14.4□□□□□ -0.1
AMBRA1-207ENST00000529553 MAST2Q6P0Q8 1798 aa14.39□□□□□ -0.11
AMBRA1-207ENST00000529553 CNMDO75829 334 aa14.39□□□□□ -0.11
AMBRA1-207ENST00000529553 CYBAP13498 195 aa14.39□□□□□ -0.11
AMBRA1-207ENST00000529553 CYP2C19P33261 490 aa14.39□□□□□ -0.11
AMBRA1-207ENST00000529553 JAG1P78504 1218 aa14.39□□□□□ -0.11
AMBRA1-207ENST00000529553 MRPS5P82675 430 aaKnown RBP14.39□□□□□ -0.11
AMBRA1-207ENST00000529553 OLFML2BQ68BL8 750 aa14.39□□□□□ -0.11
AMBRA1-207ENST00000529553 TEX11Q8IYF3 940 aa14.39□□□□□ -0.11
AMBRA1-207ENST00000529553 TRPV1Q8NER1 839 aa14.39□□□□□ -0.11
AMBRA1-207ENST00000529553 C12orf42Q96LP6 360 aa14.39□□□□□ -0.11
AMBRA1-207ENST00000529553 SIL1Q9H173 461 aa14.39□□□□□ -0.11
AMBRA1-207ENST00000529553 ZNF576Q9H609 170 aa14.39□□□□□ -0.11
AMBRA1-207ENST00000529553 SEPT4O43236 478 aa14.38□□□□□ -0.11
AMBRA1-207ENST00000529553 STRNO43815 780 aa14.38□□□□□ -0.11
AMBRA1-207ENST00000529553 DNAJB2P25686 324 aa14.38□□□□□ -0.11
AMBRA1-207ENST00000529553 ADORA1P30542 326 aa14.38□□□□□ -0.11
AMBRA1-207ENST00000529553 TIMM10P62072 90 aa14.38□□□□□ -0.11
AMBRA1-207ENST00000529553 TLE2Q04725 743 aa14.38□□□□□ -0.11
AMBRA1-207ENST00000529553 MVPQ14764 893 aaKnown RBP14.38□□□□□ -0.11
AMBRA1-207ENST00000529553 SH3RF1Q7Z6J0 888 aa14.38□□□□□ -0.11
AMBRA1-207ENST00000529553 MRPL50Q8N5N7 158 aaKnown RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms