RNA–Protein interactions for RNA: ENST00000529170.5

MKNK1-222, Transcript of MAP kinase interacting serine/threonine kinase 1, human

TSL 4

Gene MKNK1, Length 530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MKNK1-222	ENST00000529170	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	10.28	□□□□□ -0.76
MKNK1-222	ENST00000529170	TEX11	Q8IYF3	940 aa		10.28	□□□□□ -0.76
MKNK1-222	ENST00000529170	SPATA5	Q8NB90	893 aa		10.28	□□□□□ -0.76
MKNK1-222	ENST00000529170	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	10.28	□□□□□ -0.76
MKNK1-222	ENST00000529170	AS3MT	Q9HBK9	375 aa		10.28	□□□□□ -0.76
MKNK1-222	ENST00000529170	PI4KB	Q9UBF8	816 aa		10.28	□□□□□ -0.76
MKNK1-222	ENST00000529170	HERC5	Q9UII4	1024 aa	Known RBP	10.28	□□□□□ -0.76
MKNK1-222	ENST00000529170	NOB1	Q9ULX3	412 aa	Known RBP	10.28	□□□□□ -0.76
MKNK1-222	ENST00000529170	CNMD	O75829	334 aa		10.27	□□□□□ -0.77
MKNK1-222	ENST00000529170	GDF11	O95390	407 aa		10.27	□□□□□ -0.77
MKNK1-222	ENST00000529170	ZKSCAN1	P17029	563 aa	Predicted RBP	10.27	□□□□□ -0.77
MKNK1-222	ENST00000529170	MAPK4	P31152	587 aa		10.27	□□□□□ -0.77
MKNK1-222	ENST00000529170	ERVK-9	P63128	1117 aa		10.27	□□□□□ -0.77
MKNK1-222	ENST00000529170	ERVK-24	P63145	666 aa		10.27	□□□□□ -0.77
MKNK1-222	ENST00000529170	GSTO1	P78417	241 aa		10.27	□□□□□ -0.77
MKNK1-222	ENST00000529170	MVP	Q14764	893 aa	Known RBP	10.27	□□□□□ -0.77
MKNK1-222	ENST00000529170	GPR142	Q7Z601	462 aa		10.27	□□□□□ -0.77
MKNK1-222	ENST00000529170	PLEKHH3	Q7Z736	793 aa		10.27	□□□□□ -0.77
MKNK1-222	ENST00000529170	TRMT44	Q8IYL2	757 aa	Known RBP	10.27	□□□□□ -0.77
MKNK1-222	ENST00000529170	SOCS4	Q8WXH5	440 aa		10.27	□□□□□ -0.77
MKNK1-222	ENST00000529170	CDCA7L	Q96GN5	454 aa		10.27	□□□□□ -0.77
MKNK1-222	ENST00000529170	FAM161B	Q96MY7	647 aa		10.27	□□□□□ -0.77
MKNK1-222	ENST00000529170	NEUROD6	Q96NK8	337 aa		10.27	□□□□□ -0.77
MKNK1-222	ENST00000529170	EMILIN3	Q9NT22	766 aa		10.27	□□□□□ -0.77
MKNK1-222	ENST00000529170	SMC4	Q9NTJ3	1288 aa		10.27	□□□□□ -0.77
MKNK1-222	ENST00000529170	FOXD4L1	Q9NU39	408 aa		10.27	□□□□□ -0.77
MKNK1-222	ENST00000529170	TMOD4	Q9NZQ9	345 aa		10.27	□□□□□ -0.77
MKNK1-222	ENST00000529170	FLRT1	Q9NZU1	646 aa		10.27	□□□□□ -0.77
MKNK1-222	ENST00000529170	RAI14	Q9P0K7	980 aa		10.27	□□□□□ -0.77
MKNK1-222	ENST00000529170	AKAP2	Q9Y2D5	859 aa		10.27	□□□□□ -0.77
MKNK1-222	ENST00000529170	DNAH12	Q6ZR08	3092 aa		10.27	□□□□□ -0.77
MKNK1-222	ENST00000529170	C19orf81	C9J6K1	198 aa		10.26	□□□□□ -0.77
MKNK1-222	ENST00000529170	USP17L10	C9JJH3	530 aa		10.26	□□□□□ -0.77
MKNK1-222	ENST00000529170	ASNS	P08243	561 aa		10.26	□□□□□ -0.77
MKNK1-222	ENST00000529170	ARID4A	P29374	1257 aa	Predicted RBP	10.26	□□□□□ -0.77
MKNK1-222	ENST00000529170	RGS2	P41220	211 aa		10.26	□□□□□ -0.77
MKNK1-222	ENST00000529170	MCAM	P43121	646 aa		10.26	□□□□□ -0.77
MKNK1-222	ENST00000529170	PPP4C	P60510	307 aa		10.26	□□□□□ -0.77
MKNK1-222	ENST00000529170	PAGR1	Q9BTK6	254 aa		10.26	□□□□□ -0.77
MKNK1-222	ENST00000529170	SENP6	Q9GZR1	1112 aa	Predicted RBP	10.26	□□□□□ -0.77
MKNK1-222	ENST00000529170	SIPA1L1	O43166	1804 aa		10.26	□□□□□ -0.77
MKNK1-222	ENST00000529170	ATAD5	Q96QE3	1844 aa		10.26	□□□□□ -0.77
MKNK1-222	ENST00000529170	CCER2	I3L3R5	266 aa		10.25	□□□□□ -0.77
MKNK1-222	ENST00000529170	SRGAP3	O43295	1099 aa		10.25	□□□□□ -0.77
MKNK1-222	ENST00000529170	MAP2K5	Q13163	448 aa		10.25	□□□□□ -0.77
MKNK1-222	ENST00000529170	MTX1	Q13505	466 aa		10.25	□□□□□ -0.77
MKNK1-222	ENST00000529170	PDE3A	Q14432	1141 aa		10.25	□□□□□ -0.77
MKNK1-222	ENST00000529170	ADGRA1	Q86SQ6	560 aa		10.25	□□□□□ -0.77
MKNK1-222	ENST00000529170	FOXP4	Q8IVH2	680 aa	Predicted RBP	10.25	□□□□□ -0.77
MKNK1-222	ENST00000529170	MAPKAPK5	Q8IW41	473 aa		10.25	□□□□□ -0.77
MKNK1-222	ENST00000529170	TRMT2A	Q8IZ69	625 aa	Known RBP	10.25	□□□□□ -0.77
MKNK1-222	ENST00000529170	TGFBRAP1	Q8WUH2	860 aa		10.25	□□□□□ -0.77
MKNK1-222	ENST00000529170	EDC3	Q96F86	508 aa	Known RBP	10.25	□□□□□ -0.77
MKNK1-222	ENST00000529170	APBA2	Q99767	749 aa		10.25	□□□□□ -0.77
MKNK1-222	ENST00000529170	DHX36	Q9H2U1	1008 aa	Known RBP	10.25	□□□□□ -0.77
MKNK1-222	ENST00000529170	AATF	Q9NY61	560 aa	Known RBP eCLIP	10.25	□□□□□ -0.77
MKNK1-222	ENST00000529170	PALD1	Q9ULE6	856 aa		10.25	□□□□□ -0.77
MKNK1-222	ENST00000529170	ZBTB21	Q9ULJ3	1066 aa		10.25	□□□□□ -0.77
MKNK1-222	ENST00000529170	NDUFB9	Q9Y6M9	179 aa		10.25	□□□□□ -0.77
MKNK1-222	ENST00000529170	VCAN	P13611	3396 aa		10.25	□□□□□ -0.77
MKNK1-222	ENST00000529170	IGHA2	P01877	340 aa		10.24	□□□□□ -0.77
MKNK1-222	ENST00000529170	ATN1	P54259	1190 aa	Predicted RBP	10.24	□□□□□ -0.77
MKNK1-222	ENST00000529170	USP17L2	Q6R6M4	530 aa		10.24	□□□□□ -0.77
MKNK1-222	ENST00000529170	TRPV1	Q8NER1	839 aa		10.24	□□□□□ -0.77
MKNK1-222	ENST00000529170	NPLOC4	Q8TAT6	608 aa		10.24	□□□□□ -0.77
MKNK1-222	ENST00000529170	CDX2	Q99626	313 aa	Predicted RBP	10.24	□□□□□ -0.77
MKNK1-222	ENST00000529170	API5	Q9BZZ5	524 aa	Known RBP	10.24	□□□□□ -0.77
MKNK1-222	ENST00000529170	SNRK	Q9NRH2	765 aa		10.24	□□□□□ -0.77
MKNK1-222	ENST00000529170	GINM1	Q9NU53	330 aa		10.24	□□□□□ -0.77
MKNK1-222	ENST00000529170	RNF216	Q9NWF9	866 aa	Predicted RBP	10.24	□□□□□ -0.77
MKNK1-222	ENST00000529170	LRP2BP	Q9P2M1	347 aa		10.24	□□□□□ -0.77
MKNK1-222	ENST00000529170	HDAC5	Q9UQL6	1122 aa		10.24	□□□□□ -0.77
MKNK1-222	ENST00000529170	FLT1	P17948	1338 aa		10.24	□□□□□ -0.77
MKNK1-222	ENST00000529170	PRUNE2	Q8WUY3	3088 aa		10.23	□□□□□ -0.77
MKNK1-222	ENST00000529170	PTPRE	P23469	700 aa		10.23	□□□□□ -0.77
MKNK1-222	ENST00000529170	RTP1	P59025	263 aa		10.23	□□□□□ -0.77
MKNK1-222	ENST00000529170	SHH	Q15465	462 aa		10.23	□□□□□ -0.77
MKNK1-222	ENST00000529170	C9orf50	Q5SZB4	431 aa		10.23	□□□□□ -0.77
MKNK1-222	ENST00000529170	GORAB	Q5T7V8	394 aa		10.23	□□□□□ -0.77
MKNK1-222	ENST00000529170	NAA16	Q6N069	864 aa	Predicted RBP	10.23	□□□□□ -0.77
MKNK1-222	ENST00000529170	CCAR1	Q8IX12	1150 aa	Known RBP	10.23	□□□□□ -0.77
MKNK1-222	ENST00000529170	GTF3C2	Q8WUA4	911 aa	Predicted RBP	10.23	□□□□□ -0.77
MKNK1-222	ENST00000529170	C12orf42	Q96LP6	360 aa		10.23	□□□□□ -0.77
MKNK1-222	ENST00000529170	SEMA6B	Q9H3T3	888 aa		10.23	□□□□□ -0.77
MKNK1-222	ENST00000529170	BTBD7	Q9P203	1132 aa		10.23	□□□□□ -0.77
MKNK1-222	ENST00000529170	DDX20	Q9UHI6	824 aa	Known RBP	10.23	□□□□□ -0.77
MKNK1-222	ENST00000529170	SAP30BP	Q9UHR5	308 aa	Known RBP	10.23	□□□□□ -0.77
MKNK1-222	ENST00000529170	RABGAP1	Q9Y3P9	1069 aa		10.23	□□□□□ -0.77
MKNK1-222	ENST00000529170	SPTBN5	Q9NRC6	3674 aa	Known RBP	10.22	□□□□□ -0.77
MKNK1-222	ENST00000529170	EYS	Q5T1H1	3165 aa		10.22	□□□□□ -0.77
MKNK1-222	ENST00000529170	PNMA6E	A0A0J9YXQ4	647 aa		10.22	□□□□□ -0.77
MKNK1-222	ENST00000529170	SLC15A5	A6NIM6	579 aa		10.22	□□□□□ -0.77
MKNK1-222	ENST00000529170	USP17L15	C9J2P7	530 aa		10.22	□□□□□ -0.77
MKNK1-222	ENST00000529170	USP17L13	C9JLJ4	530 aa		10.22	□□□□□ -0.77
MKNK1-222	ENST00000529170	USP17L11	C9JVI0	530 aa		10.22	□□□□□ -0.77
MKNK1-222	ENST00000529170	USP17L18	D6R9N7	530 aa		10.22	□□□□□ -0.77
MKNK1-222	ENST00000529170	USP17L22	D6RA61	530 aa		10.22	□□□□□ -0.77
MKNK1-222	ENST00000529170	USP17L17	D6RBQ6	530 aa		10.22	□□□□□ -0.77
MKNK1-222	ENST00000529170	USP17L19	D6RCP7	530 aa		10.22	□□□□□ -0.77
MKNK1-222	ENST00000529170	USP17L20	D6RJB6	530 aa		10.22	□□□□□ -0.77

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