RNA–Protein interactions for RNA: ENST00000529167.5

C11orf88-203, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene C11orf88, Length 3,099 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-203ENST00000529167 ARPC5LQ9BPX5 153 aa9.07□□□□□ -0.96
C11orf88-203ENST00000529167 MMTAG2Q9BU76 263 aaKnown RBP9.07□□□□□ -0.96
C11orf88-203ENST00000529167 SUGCTQ9HAC7 445 aa9.07□□□□□ -0.96
C11orf88-203ENST00000529167 ANO2Q9NQ90 1003 aa9.07□□□□□ -0.96
C11orf88-203ENST00000529167 EIF3HO15372 352 aaKnown RBP eCLIP9.06□□□□□ -0.96
C11orf88-203ENST00000529167 U2AF1L5P0DN76 240 aaPredicted RBP9.06□□□□□ -0.96
C11orf88-203ENST00000529167 U2AF1Q01081 240 aaKnown RBP eCLIP9.06□□□□□ -0.96
C11orf88-203ENST00000529167 CEP85LQ5SZL2 805 aa9.06□□□□□ -0.96
C11orf88-203ENST00000529167 CEP85Q6P2H3 762 aa9.06□□□□□ -0.96
C11orf88-203ENST00000529167 IGSF22Q8N9C0 903 aa9.06□□□□□ -0.96
C11orf88-203ENST00000529167 API5Q9BZZ5 524 aaKnown RBP9.06□□□□□ -0.96
C11orf88-203ENST00000529167 XPO4Q9C0E2 1151 aaKnown RBP9.06□□□□□ -0.96
C11orf88-203ENST00000529167 RANBP17Q9H2T7 1088 aaKnown RBP9.06□□□□□ -0.96
C11orf88-203ENST00000529167 VCPKMTQ9H867 229 aa9.06□□□□□ -0.96
C11orf88-203ENST00000529167 GOPCQ9HD26 462 aa9.06□□□□□ -0.96
C11orf88-203ENST00000529167 HYPKQ9NX55 129 aa9.06□□□□□ -0.96
C11orf88-203ENST00000529167 GGA2Q9UJY4 613 aa9.06□□□□□ -0.96
C11orf88-203ENST00000529167 CHMP3Q9Y3E7 222 aa9.06□□□□□ -0.96
C11orf88-203ENST00000529167 SHTN1A0MZ66 631 aa9.06□□□□□ -0.96
C11orf88-203ENST00000529167 PES1O00541 588 aaKnown RBP9.06□□□□□ -0.96
C11orf88-203ENST00000529167 PHACTR2O75167 634 aa9.06□□□□□ -0.96
C11orf88-203ENST00000529167 HDGFL1Q5TGJ6 251 aa9.06□□□□□ -0.96
C11orf88-203ENST00000529167 NFXL1Q6ZNB6 911 aa9.06□□□□□ -0.96
C11orf88-203ENST00000529167 TMC6Q7Z403 805 aa9.06□□□□□ -0.96
C11orf88-203ENST00000529167 NCAPG2Q86XI2 1143 aa9.06□□□□□ -0.96
C11orf88-203ENST00000529167 TMEM139Q8IV31 216 aa9.06□□□□□ -0.96
C11orf88-203ENST00000529167 DHX58Q96C10 678 aa9.06□□□□□ -0.96
C11orf88-203ENST00000529167 YIPF2Q9BWQ6 316 aa9.06□□□□□ -0.96
C11orf88-203ENST00000529167 IRX2Q9BZI1 471 aaPredicted RBP9.06□□□□□ -0.96
C11orf88-203ENST00000529167 KAT14Q9H8E8 782 aa9.06□□□□□ -0.96
C11orf88-203ENST00000529167 PPP2R2CQ9Y2T4 447 aa9.06□□□□□ -0.96
C11orf88-203ENST00000529167 U3KPZ7 1027 aaPredicted RBP9.06□□□□□ -0.96
C11orf88-203ENST00000529167 ARHGAP6O43182 974 aa9.06□□□□□ -0.96
C11orf88-203ENST00000529167 FESP07332 822 aa9.06□□□□□ -0.96
C11orf88-203ENST00000529167 SETSIPP0DME0 302 aa9.06□□□□□ -0.96
C11orf88-203ENST00000529167 EZRP15311 586 aaKnown RBP9.06□□□□□ -0.96
C11orf88-203ENST00000529167 ACTN3Q08043 901 aaPredicted RBP9.06□□□□□ -0.96
C11orf88-203ENST00000529167 PPFIA1Q13136 1202 aa9.06□□□□□ -0.96
C11orf88-203ENST00000529167 C3orf20Q8ND61 904 aa9.06□□□□□ -0.96
C11orf88-203ENST00000529167 BCAS4Q8TDM0 211 aa9.06□□□□□ -0.96
C11orf88-203ENST00000529167 HOOK2Q96ED9 719 aa9.06□□□□□ -0.96
C11orf88-203ENST00000529167 CRACR2AQ9BSW2 395 aa9.06□□□□□ -0.96
C11orf88-203ENST00000529167 RIPOR2Q9Y4F9 1068 aa9.06□□□□□ -0.96
C11orf88-203ENST00000529167 SNX14Q9Y5W7 946 aa9.06□□□□□ -0.96
C11orf88-203ENST00000529167 MEGF6O75095 1541 aa9.05□□□□□ -0.96
C11orf88-203ENST00000529167 SBF1O95248 1867 aa9.05□□□□□ -0.96
C11orf88-203ENST00000529167 ZEB2O60315 1214 aa9.05□□□□□ -0.96
C11orf88-203ENST00000529167 DRP2Q13474 957 aa9.05□□□□□ -0.96
C11orf88-203ENST00000529167 AMOTQ4VCS5 1084 aa9.05□□□□□ -0.96
C11orf88-203ENST00000529167 FAM228AQ86W67 206 aa9.05□□□□□ -0.96
C11orf88-203ENST00000529167 AMIGO3Q86WK7 504 aa9.05□□□□□ -0.96
C11orf88-203ENST00000529167 RBM12BQ8IXT5 1001 aaKnown RBP9.05□□□□□ -0.96
C11orf88-203ENST00000529167 CEP57L1Q8IYX8 460 aa9.05□□□□□ -0.96
C11orf88-203ENST00000529167 PALLDQ8WX93 1383 aa9.05□□□□□ -0.96
C11orf88-203ENST00000529167 EVC2Q86UK5 1308 aa9.05□□□□□ -0.96
C11orf88-203ENST00000529167 GNG11P61952 73 aa9.05□□□□□ -0.96
C11orf88-203ENST00000529167 VSNL1P62760 191 aa9.05□□□□□ -0.96
C11orf88-203ENST00000529167 FOXD4Q12950 439 aaPredicted RBP9.05□□□□□ -0.96
C11orf88-203ENST00000529167 SNX1Q13596 522 aa9.05□□□□□ -0.96
C11orf88-203ENST00000529167 C9orf131Q5VYM1 1079 aa9.05□□□□□ -0.96
C11orf88-203ENST00000529167 LMBR1Q8WVP7 490 aa9.05□□□□□ -0.96
C11orf88-203ENST00000529167 SPDL1Q96EA4 605 aa9.05□□□□□ -0.96
C11orf88-203ENST00000529167 SH3GL2Q99962 352 aa9.05□□□□□ -0.96
C11orf88-203ENST00000529167 MYO6Q9UM54 1294 aa9.05□□□□□ -0.96
C11orf88-203ENST00000529167 COL3A1P02461 1466 aaPredicted RBP9.05□□□□□ -0.96
C11orf88-203ENST00000529167 C4AP0C0L4 1744 aa9.04□□□□□ -0.96
C11orf88-203ENST00000529167 AHCYL1O43865 530 aa9.04□□□□□ -0.96
C11orf88-203ENST00000529167 WDHD1O75717 1129 aaPredicted RBP9.04□□□□□ -0.96
C11orf88-203ENST00000529167 CDKL5O76039 1030 aa9.04□□□□□ -0.96
C11orf88-203ENST00000529167 LARGE1O95461 756 aa9.04□□□□□ -0.96
C11orf88-203ENST00000529167 PDCP20941 246 aa9.04□□□□□ -0.96
C11orf88-203ENST00000529167 SLC8A1P32418 973 aa9.04□□□□□ -0.96
C11orf88-203ENST00000529167 ST3GAL1Q11201 340 aa9.04□□□□□ -0.96
C11orf88-203ENST00000529167 CCDC40Q4G0X9 1142 aa9.04□□□□□ -0.96
C11orf88-203ENST00000529167 ZCRB1Q8TBF4 217 aaKnown RBP9.04□□□□□ -0.96
C11orf88-203ENST00000529167 IP6K1Q92551 441 aa9.04□□□□□ -0.96
C11orf88-203ENST00000529167 SMARCC1Q92922 1105 aaPredicted RBP9.04□□□□□ -0.96
C11orf88-203ENST00000529167 LMCD1Q9NZU5 365 aa9.04□□□□□ -0.96
C11orf88-203ENST00000529167 NUB1Q9Y5A7 615 aa9.04□□□□□ -0.96
C11orf88-203ENST00000529167 KDM6AO15550 1401 aaPredicted RBP9.04□□□□□ -0.96
C11orf88-203ENST00000529167 CD163L1Q9NR16 1453 aa9.04□□□□□ -0.96
C11orf88-203ENST00000529167 RBM47A0AV96 593 aaKnown RBP9.04□□□□□ -0.96
C11orf88-203ENST00000529167 AMPHP49418 695 aa9.04□□□□□ -0.96
C11orf88-203ENST00000529167 NAP1L1P55209 391 aaKnown RBP9.04□□□□□ -0.96
C11orf88-203ENST00000529167 KCNB1Q14721 858 aa9.04□□□□□ -0.96
C11orf88-203ENST00000529167 SNCBQ16143 134 aa9.04□□□□□ -0.96
C11orf88-203ENST00000529167 AOPEPQ8N6M6 819 aa9.04□□□□□ -0.96
C11orf88-203ENST00000529167 SPDYE1Q8NFV5 336 aaPredicted RBP9.04□□□□□ -0.96
C11orf88-203ENST00000529167 ZBTB10Q96DT7 871 aa9.04□□□□□ -0.96
C11orf88-203ENST00000529167 CDC23Q9UJX2 597 aa9.04□□□□□ -0.96
C11orf88-203ENST00000529167 BLOC1S6Q9UL45 172 aa9.04□□□□□ -0.96
C11orf88-203ENST00000529167 ITGB4P16144 1822 aa9.04□□□□□ -0.96
C11orf88-203ENST00000529167 RGPD2P0DJD1 1756 aa9.04□□□□□ -0.96
C11orf88-203ENST00000529167 VPS37CA5D8V6 355 aaPredicted RBP9.03□□□□□ -0.96
C11orf88-203ENST00000529167 CCDC15Q0P6D6 951 aa9.03□□□□□ -0.96
C11orf88-203ENST00000529167 LARP1BQ659C4 914 aaKnown RBP9.03□□□□□ -0.96
C11orf88-203ENST00000529167 CAPS2Q9BXY5 557 aa9.03□□□□□ -0.96
C11orf88-203ENST00000529167 IFNKQ9P0W0 207 aa9.03□□□□□ -0.96
C11orf88-203ENST00000529167 HPCAL4Q9UM19 191 aa9.03□□□□□ -0.96
C11orf88-203ENST00000529167 SKAP2O75563 359 aaPredicted RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms