RNA–Protein interactions for RNA: ENST00000529133.5

CAPN1-217, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-217ENST00000529133 ADCK5Q3MIX3 580 aa13.55□□□□□ -0.24
CAPN1-217ENST00000529133 CERKLQ49MI3 558 aaPredicted RBP13.55□□□□□ -0.24
CAPN1-217ENST00000529133 CST9Q5W186 159 aa13.55□□□□□ -0.24
CAPN1-217ENST00000529133 IL17RAQ96F46 866 aa13.55□□□□□ -0.24
CAPN1-217ENST00000529133 CNNM2Q9H8M5 875 aa13.55□□□□□ -0.24
CAPN1-217ENST00000529133 GBA2Q9HCG7 927 aaPredicted RBP13.55□□□□□ -0.24
CAPN1-217ENST00000529133 PLIN4Q96Q06 1357 aa13.55□□□□□ -0.24
CAPN1-217ENST00000529133 RANBP6O60518 1105 aaKnown RBP13.54□□□□□ -0.24
CAPN1-217ENST00000529133 CTNND1O60716 968 aaKnown RBP13.54□□□□□ -0.24
CAPN1-217ENST00000529133 CAP2P40123 477 aa13.54□□□□□ -0.24
CAPN1-217ENST00000529133 IREB2P48200 963 aaKnown RBP13.54□□□□□ -0.24
CAPN1-217ENST00000529133 FKBP1BP68106 108 aa13.54□□□□□ -0.24
CAPN1-217ENST00000529133 TRDNQ13061 729 aa13.54□□□□□ -0.24
CAPN1-217ENST00000529133 COL9A3Q14050 684 aaPredicted RBP13.54□□□□□ -0.24
CAPN1-217ENST00000529133 FAM47AQ5JRC9 791 aa13.54□□□□□ -0.24
CAPN1-217ENST00000529133 ARMC9Q7Z3E5 817 aa13.54□□□□□ -0.24
CAPN1-217ENST00000529133 RALYLQ86SE5 291 aaKnown RBP13.54□□□□□ -0.24
CAPN1-217ENST00000529133 MB21D2Q8IYB1 491 aaPredicted RBP13.54□□□□□ -0.24
CAPN1-217ENST00000529133 ZNF444Q8N0Y2 327 aaPredicted RBP13.54□□□□□ -0.24
CAPN1-217ENST00000529133 NCOA7Q8NI08 942 aa13.54□□□□□ -0.24
CAPN1-217ENST00000529133 ESR2Q92731 530 aa13.54□□□□□ -0.24
CAPN1-217ENST00000529133 CCDC17Q96LX7 622 aa13.54□□□□□ -0.24
CAPN1-217ENST00000529133 JAKMIP1Q96N16 626 aaKnown RBP13.54□□□□□ -0.24
CAPN1-217ENST00000529133 TBC1D32Q96NH3 1257 aa13.54□□□□□ -0.24
CAPN1-217ENST00000529133 KRT23Q9C075 422 aa13.54□□□□□ -0.24
CAPN1-217ENST00000529133 UBE2Q2LH0YL09 131 aa13.53□□□□□ -0.24
CAPN1-217ENST00000529133 KDM4AO75164 1064 aa13.53□□□□□ -0.24
CAPN1-217ENST00000529133 GH2P01242 217 aa13.53□□□□□ -0.24
CAPN1-217ENST00000529133 NT5C2P49902 561 aa13.53□□□□□ -0.24
CAPN1-217ENST00000529133 MAP3K9P80192 1104 aa13.53□□□□□ -0.24
CAPN1-217ENST00000529133 TFAP4Q01664 338 aa13.53□□□□□ -0.24
CAPN1-217ENST00000529133 VGLL4Q14135 290 aa13.53□□□□□ -0.24
CAPN1-217ENST00000529133 ABCB5Q2M3G0 1257 aa13.53□□□□□ -0.24
CAPN1-217ENST00000529133 NOL9Q5SY16 702 aaKnown RBP13.53□□□□□ -0.24
CAPN1-217ENST00000529133 LDLRAD1Q5T700 205 aa13.53□□□□□ -0.24
CAPN1-217ENST00000529133 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.53□□□□□ -0.24
CAPN1-217ENST00000529133 SCYL3Q8IZE3 742 aa13.53□□□□□ -0.24
CAPN1-217ENST00000529133 C2orf69Q8N8R5 385 aa13.53□□□□□ -0.24
CAPN1-217ENST00000529133 ZKSCAN4Q969J2 545 aaPredicted RBP13.53□□□□□ -0.24
CAPN1-217ENST00000529133 NEK1Q96PY6 1258 aa13.53□□□□□ -0.24
CAPN1-217ENST00000529133 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.53□□□□□ -0.24
CAPN1-217ENST00000529133 ZBTB21Q9ULJ3 1066 aa13.53□□□□□ -0.24
CAPN1-217ENST00000529133 OTOFQ9HC10 1997 aa13.52□□□□□ -0.24
CAPN1-217ENST00000529133 IGKV6D-41A0A0C4DH26 115 aa13.52□□□□□ -0.25
CAPN1-217ENST00000529133 TSPY2A6NKD2 308 aa13.52□□□□□ -0.25
CAPN1-217ENST00000529133 MPHOSPH10O00566 681 aaKnown RBP13.52□□□□□ -0.25
CAPN1-217ENST00000529133 TSPY3P0CV98 308 aa13.52□□□□□ -0.25
CAPN1-217ENST00000529133 TSPY8P0CW00 308 aa13.52□□□□□ -0.25
CAPN1-217ENST00000529133 GUCY1A2P33402 732 aa13.52□□□□□ -0.25
CAPN1-217ENST00000529133 ANTXR2P58335 489 aa13.52□□□□□ -0.25
CAPN1-217ENST00000529133 TMEM179Q6ZVK1 233 aa13.52□□□□□ -0.25
CAPN1-217ENST00000529133 CYB5R4Q7L1T6 521 aa13.52□□□□□ -0.25
CAPN1-217ENST00000529133 ANKRD13AQ8IZ07 590 aa13.52□□□□□ -0.25
CAPN1-217ENST00000529133 NEDD1Q8NHV4 660 aa13.52□□□□□ -0.25
CAPN1-217ENST00000529133 CLMNQ96JQ2 1002 aa13.52□□□□□ -0.25
CAPN1-217ENST00000529133 GINM1Q9NU53 330 aa13.52□□□□□ -0.25
CAPN1-217ENST00000529133 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.52□□□□□ -0.25
CAPN1-217ENST00000529133 SNCAIPQ9Y6H5 919 aa13.52□□□□□ -0.25
CAPN1-217ENST00000529133 ASNSP08243 561 aa13.51□□□□□ -0.25
CAPN1-217ENST00000529133 CPA1P15085 419 aa13.51□□□□□ -0.25
CAPN1-217ENST00000529133 PSMA5P28066 241 aa13.51□□□□□ -0.25
CAPN1-217ENST00000529133 SEPT2Q15019 361 aa13.51□□□□□ -0.25
CAPN1-217ENST00000529133 CLEC10AQ8IUN9 316 aa13.51□□□□□ -0.25
CAPN1-217ENST00000529133 KIF2CQ99661 725 aa13.51□□□□□ -0.25
CAPN1-217ENST00000529133 TM6SF1Q9BZW5 370 aa13.51□□□□□ -0.25
CAPN1-217ENST00000529133 CABP5Q9NP86 173 aa13.51□□□□□ -0.25
CAPN1-217ENST00000529133 PICK1Q9NRD5 415 aa13.51□□□□□ -0.25
CAPN1-217ENST00000529133 ZSWIM5Q9P217 1185 aa13.51□□□□□ -0.25
CAPN1-217ENST00000529133 CSADQ9Y600 493 aa13.51□□□□□ -0.25
CAPN1-217ENST00000529133 GREB1LQ9C091 1923 aaPredicted RBP13.51□□□□□ -0.25
CAPN1-217ENST00000529133 DOCK1Q14185 1865 aa13.5□□□□□ -0.25
CAPN1-217ENST00000529133 TRPM7Q96QT4 1865 aa13.5□□□□□ -0.25
CAPN1-217ENST00000529133 UNCXA6NJT0 531 aa13.5□□□□□ -0.25
CAPN1-217ENST00000529133 TMEM88BA6NKF7 163 aa13.5□□□□□ -0.25
CAPN1-217ENST00000529133 PRC1O43663 620 aa13.5□□□□□ -0.25
CAPN1-217ENST00000529133 NMT2O60551 498 aa13.5□□□□□ -0.25
CAPN1-217ENST00000529133 HMGB1P09429 215 aaKnown RBP13.5□□□□□ -0.25
CAPN1-217ENST00000529133 CASTP20810 708 aaKnown RBP13.5□□□□□ -0.25
CAPN1-217ENST00000529133 RPS6KB1P23443 525 aa13.5□□□□□ -0.25
CAPN1-217ENST00000529133 MCM5P33992 734 aa13.5□□□□□ -0.25
CAPN1-217ENST00000529133 RAB3GAP1Q15042 981 aa13.5□□□□□ -0.25
CAPN1-217ENST00000529133 BLOC1S2Q6QNY1 142 aa13.5□□□□□ -0.25
CAPN1-217ENST00000529133 CHST3Q7LGC8 479 aa13.5□□□□□ -0.25
CAPN1-217ENST00000529133 CCDC84Q86UT8 332 aaPredicted RBP13.5□□□□□ -0.25
CAPN1-217ENST00000529133 ZKSCAN3Q9BRR0 538 aa13.5□□□□□ -0.25
CAPN1-217ENST00000529133 UPF3BQ9BZI7 483 aaKnown RBP13.5□□□□□ -0.25
CAPN1-217ENST00000529133 ELP3Q9H9T3 547 aa13.5□□□□□ -0.25
CAPN1-217ENST00000529133 ZSWIM6Q9HCJ5 1215 aa13.5□□□□□ -0.25
CAPN1-217ENST00000529133 IL17RBQ9NRM6 502 aa13.5□□□□□ -0.25
CAPN1-217ENST00000529133 TCP11L1Q9NUJ3 509 aa13.5□□□□□ -0.25
CAPN1-217ENST00000529133 WDR19Q8NEZ3 1342 aa13.49□□□□□ -0.25
CAPN1-217ENST00000529133 PTPRAP18433 802 aa13.49□□□□□ -0.25
CAPN1-217ENST00000529133 HUNKP57058 714 aa13.49□□□□□ -0.25
CAPN1-217ENST00000529133 ICA1Q05084 483 aa13.49□□□□□ -0.25
CAPN1-217ENST00000529133 DHX32Q7L7V1 743 aaKnown RBP13.49□□□□□ -0.25
CAPN1-217ENST00000529133 IQCA1Q86XH1 822 aa13.49□□□□□ -0.25
CAPN1-217ENST00000529133 CEP95Q96GE4 821 aa13.49□□□□□ -0.25
CAPN1-217ENST00000529133 TCEANC2Q96MN5 208 aa13.49□□□□□ -0.25
CAPN1-217ENST00000529133 ZSCAN10Q96SZ4 725 aaPredicted RBP13.49□□□□□ -0.25
CAPN1-217ENST00000529133 UBAC1Q9BSL1 405 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms