RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 TEX11Q8IYF3 940 aa23.49■■□□□ 1.35
SSRP1-204ENST00000529002 SH3RF3Q8TEJ3 882 aaPredicted RBP23.49■■□□□ 1.35
SSRP1-204ENST00000529002 WDR18Q9BV38 432 aa23.49■■□□□ 1.35
SSRP1-204ENST00000529002 SENP6Q9GZR1 1112 aaPredicted RBP23.49■■□□□ 1.35
SSRP1-204ENST00000529002 DNAJC18Q9H819 358 aa23.49■■□□□ 1.35
SSRP1-204ENST00000529002 COPRSQ9NQ92 184 aa23.49■■□□□ 1.35
SSRP1-204ENST00000529002 TMOD4Q9NZQ9 345 aa23.49■■□□□ 1.35
SSRP1-204ENST00000529002 DNAH12Q6ZR08 3092 aa23.48■■□□□ 1.35
SSRP1-204ENST00000529002 ATN1P54259 1190 aaPredicted RBP23.48■■□□□ 1.35
SSRP1-204ENST00000529002 ERVK-9P63128 1117 aa23.48■■□□□ 1.35
SSRP1-204ENST00000529002 ERVK-24P63145 666 aa23.48■■□□□ 1.35
SSRP1-204ENST00000529002 FLRT1Q9NZU1 646 aa23.48■■□□□ 1.35
SSRP1-204ENST00000529002 RAI14Q9P0K7 980 aa23.48■■□□□ 1.35
SSRP1-204ENST00000529002 GDF11O95390 407 aa23.47■■□□□ 1.35
SSRP1-204ENST00000529002 RGS2P41220 211 aa23.47■■□□□ 1.35
SSRP1-204ENST00000529002 NEUROD6Q96NK8 337 aa23.47■■□□□ 1.35
SSRP1-204ENST00000529002 LDHCP07864 332 aa23.46■■□□□ 1.35
SSRP1-204ENST00000529002 MAPK4P31152 587 aa23.46■■□□□ 1.35
SSRP1-204ENST00000529002 RLFQ13129 1914 aa23.46■■□□□ 1.35
SSRP1-204ENST00000529002 FOCADQ5VW36 1801 aa23.46■■□□□ 1.35
SSRP1-204ENST00000529002 PLEKHH3Q7Z736 793 aa23.46■■□□□ 1.35
SSRP1-204ENST00000529002 LBHD1Q9BQE6 289 aaPredicted RBP23.46■■□□□ 1.35
SSRP1-204ENST00000529002 HERC5Q9UII4 1024 aaKnown RBP23.46■■□□□ 1.35
SSRP1-204ENST00000529002 ZNF697Q5TEC3 545 aa23.45■■□□□ 1.34
SSRP1-204ENST00000529002 CCAR1Q8IX12 1150 aaKnown RBP23.45■■□□□ 1.34
SSRP1-204ENST00000529002 TRMT44Q8IYL2 757 aaKnown RBP23.45■■□□□ 1.34
SSRP1-204ENST00000529002 SPATA5Q8NB90 893 aa23.45■■□□□ 1.34
SSRP1-204ENST00000529002 CDX2Q99626 313 aaPredicted RBP23.45■■□□□ 1.34
SSRP1-204ENST00000529002 MEIS3Q99687 375 aa23.45■■□□□ 1.34
SSRP1-204ENST00000529002 APBA2Q99767 749 aa23.45■■□□□ 1.34
SSRP1-204ENST00000529002 GSTO1P78417 241 aa23.44■■□□□ 1.34
SSRP1-204ENST00000529002 MVPQ14764 893 aaKnown RBP23.44■■□□□ 1.34
SSRP1-204ENST00000529002 MAPKAPK5Q8IW41 473 aa23.44■■□□□ 1.34
SSRP1-204ENST00000529002 EMILIN3Q9NT22 766 aa23.44■■□□□ 1.34
SSRP1-204ENST00000529002 PI4KBQ9UBF8 816 aa23.44■■□□□ 1.34
SSRP1-204ENST00000529002 USP17L10C9JJH3 530 aa23.43■■□□□ 1.34
SSRP1-204ENST00000529002 CNMDO75829 334 aa23.43■■□□□ 1.34
SSRP1-204ENST00000529002 ASNSP08243 561 aa23.43■■□□□ 1.34
SSRP1-204ENST00000529002 SMC4Q9NTJ3 1288 aa23.43■■□□□ 1.34
SSRP1-204ENST00000529002 AATFQ9NY61 560 aaKnown RBP eCLIP23.43■■□□□ 1.34
SSRP1-204ENST00000529002 PRUNE2Q8WUY3 3088 aa23.43■■□□□ 1.34
SSRP1-204ENST00000529002 C19orf81C9J6K1 198 aa23.42■■□□□ 1.34
SSRP1-204ENST00000529002 MAP2K5Q13163 448 aa23.42■■□□□ 1.34
SSRP1-204ENST00000529002 SHHQ15465 462 aa23.42■■□□□ 1.34
SSRP1-204ENST00000529002 C9orf50Q5SZB4 431 aa23.42■■□□□ 1.34
SSRP1-204ENST00000529002 TGFBRAP1Q8WUH2 860 aa23.42■■□□□ 1.34
SSRP1-204ENST00000529002 MAP4K4O95819 1239 aaPredicted RBP23.41■■□□□ 1.34
SSRP1-204ENST00000529002 CNGA1P29973 690 aa23.41■■□□□ 1.34
SSRP1-204ENST00000529002 MCAMP43121 646 aa23.41■■□□□ 1.34
SSRP1-204ENST00000529002 RTP1P59025 263 aa23.41■■□□□ 1.34
SSRP1-204ENST00000529002 ZYXQ15942 572 aaKnown RBP23.41■■□□□ 1.34
SSRP1-204ENST00000529002 WDR78Q5VTH9 848 aa23.41■■□□□ 1.34
SSRP1-204ENST00000529002 MAFAQ8NHW3 353 aaPredicted RBP23.41■■□□□ 1.34
SSRP1-204ENST00000529002 EDC3Q96F86 508 aaKnown RBP23.41■■□□□ 1.34
SSRP1-204ENST00000529002 CWC22Q9HCG8 908 aaKnown RBP23.41■■□□□ 1.34
SSRP1-204ENST00000529002 PALD1Q9ULE6 856 aa23.41■■□□□ 1.34
SSRP1-204ENST00000529002 ZBTB21Q9ULJ3 1066 aa23.41■■□□□ 1.34
SSRP1-204ENST00000529002 AKAP2Q9Y2D5 859 aa23.41■■□□□ 1.34
SSRP1-204ENST00000529002 MYH1P12882 1939 aa23.41■■□□□ 1.34
SSRP1-204ENST00000529002 ANP32CO43423 234 aa23.4■■□□□ 1.34
SSRP1-204ENST00000529002 ADGRA1Q86SQ6 560 aa23.4■■□□□ 1.34
SSRP1-204ENST00000529002 TRPV1Q8NER1 839 aa23.4■■□□□ 1.34
SSRP1-204ENST00000529002 MYLIPQ8WY64 445 aa23.4■■□□□ 1.34
SSRP1-204ENST00000529002 SEMA6BQ9H3T3 888 aa23.4■■□□□ 1.34
SSRP1-204ENST00000529002 SNRKQ9NRH2 765 aa23.4■■□□□ 1.34
SSRP1-204ENST00000529002 LRP2BPQ9P2M1 347 aa23.4■■□□□ 1.34
SSRP1-204ENST00000529002 DDX20Q9UHI6 824 aaKnown RBP23.4■■□□□ 1.34
SSRP1-204ENST00000529002 SAP30BPQ9UHR5 308 aaKnown RBP23.4■■□□□ 1.34
SSRP1-204ENST00000529002 NOB1Q9ULX3 412 aaKnown RBP23.4■■□□□ 1.34
SSRP1-204ENST00000529002 GORABQ5T7V8 394 aa23.39■■□□□ 1.33
SSRP1-204ENST00000529002 CRACR2BQ8N4Y2 399 aaPredicted RBP23.39■■□□□ 1.33
SSRP1-204ENST00000529002 NPLOC4Q8TAT6 608 aa23.39■■□□□ 1.33
SSRP1-204ENST00000529002 ATP11BQ9Y2G3 1177 aa23.39■■□□□ 1.33
SSRP1-204ENST00000529002 SPTBN5Q9NRC6 3674 aaKnown RBP23.39■■□□□ 1.33
SSRP1-204ENST00000529002 FLT1P17948 1338 aa23.38■■□□□ 1.33
SSRP1-204ENST00000529002 SRGAP3O43295 1099 aa23.38■■□□□ 1.33
SSRP1-204ENST00000529002 ARID4AP29374 1257 aaPredicted RBP23.38■■□□□ 1.33
SSRP1-204ENST00000529002 CYP2C19P33261 490 aa23.38■■□□□ 1.33
SSRP1-204ENST00000529002 ALDH1L2Q3SY69 923 aa23.38■■□□□ 1.33
SSRP1-204ENST00000529002 GJC2Q5T442 439 aaPredicted RBP23.38■■□□□ 1.33
SSRP1-204ENST00000529002 MFSD14CQ5VZR4 134 aa23.38■■□□□ 1.33
SSRP1-204ENST00000529002 ANO1Q5XXA6 986 aa23.38■■□□□ 1.33
SSRP1-204ENST00000529002 CDCA7LQ96GN5 454 aa23.38■■□□□ 1.33
SSRP1-204ENST00000529002 DHX36Q9H2U1 1008 aaKnown RBP23.38■■□□□ 1.33
SSRP1-204ENST00000529002 TTYH1Q9H313 450 aaPredicted RBP23.38■■□□□ 1.33
SSRP1-204ENST00000529002 TTC28Q96AY4 2481 aa23.37■■□□□ 1.33
SSRP1-204ENST00000529002 USP17L2Q6R6M4 530 aa23.37■■□□□ 1.33
SSRP1-204ENST00000529002 METTL16Q86W50 562 aaKnown RBP23.37■■□□□ 1.33
SSRP1-204ENST00000529002 PRDM6Q9NQX0 595 aa23.37■■□□□ 1.33
SSRP1-204ENST00000529002 PRKAG2Q9UGJ0 569 aa23.37■■□□□ 1.33
SSRP1-204ENST00000529002 CDH23Q9H251 3354 aa23.37■■□□□ 1.33
SSRP1-204ENST00000529002 SMCHD1A6NHR9 2005 aa23.37■■□□□ 1.33
SSRP1-204ENST00000529002 E9PSI1 815 aa23.36■■□□□ 1.33
SSRP1-204ENST00000529002 PTPREP23469 700 aa23.36■■□□□ 1.33
SSRP1-204ENST00000529002 SLFN5Q08AF3 891 aa23.36■■□□□ 1.33
SSRP1-204ENST00000529002 NAA16Q6N069 864 aaPredicted RBP23.36■■□□□ 1.33
SSRP1-204ENST00000529002 FOXP4Q8IVH2 680 aaPredicted RBP23.36■■□□□ 1.33
SSRP1-204ENST00000529002 LPAR1Q92633 364 aa23.36■■□□□ 1.33
SSRP1-204ENST00000529002 NOL10Q9BSC4 688 aaKnown RBP23.36■■□□□ 1.33
SSRP1-204ENST00000529002 TRIM34Q9BYJ4 488 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms