RNA–Protein interactions for RNA: ENST00000528840.1

PTP4A2-211, Transcript of protein tyrosine phosphatase type IVA, member 2, human

TSL 2

Gene PTP4A2, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTP4A2-211	ENST00000528840	FPGT-TNNI3K	V9GXZ4	949 aa		13.95	□□□□□ -0.18
PTP4A2-211	ENST00000528840	DOCK3	Q8IZD9	2030 aa		13.95	□□□□□ -0.18
PTP4A2-211	ENST00000528840	RPTOR	Q8N122	1335 aa		13.94	□□□□□ -0.18
PTP4A2-211	ENST00000528840	C19orf81	C9J6K1	198 aa		13.94	□□□□□ -0.18
PTP4A2-211	ENST00000528840	HMGCR	P04035	888 aa		13.94	□□□□□ -0.18
PTP4A2-211	ENST00000528840	ASNS	P08243	561 aa		13.94	□□□□□ -0.18
PTP4A2-211	ENST00000528840	ATP8B2	P98198	1209 aa		13.94	□□□□□ -0.18
PTP4A2-211	ENST00000528840	SHROOM1	Q2M3G4	852 aa	Predicted RBP	13.94	□□□□□ -0.18
PTP4A2-211	ENST00000528840	ADGRA1	Q86SQ6	560 aa		13.94	□□□□□ -0.18
PTP4A2-211	ENST00000528840	GPRC5A	Q8NFJ5	357 aa		13.94	□□□□□ -0.18
PTP4A2-211	ENST00000528840	GPR108	Q9NPR9	543 aa		13.94	□□□□□ -0.18
PTP4A2-211	ENST00000528840	PTPRF	P10586	1907 aa		13.94	□□□□□ -0.18
PTP4A2-211	ENST00000528840	USP17L10	C9JJH3	530 aa		13.93	□□□□□ -0.18
PTP4A2-211	ENST00000528840	CCER2	I3L3R5	266 aa		13.93	□□□□□ -0.18
PTP4A2-211	ENST00000528840	GDF11	O95390	407 aa		13.93	□□□□□ -0.18
PTP4A2-211	ENST00000528840	HOXA7	P31268	230 aa	Predicted RBP	13.93	□□□□□ -0.18
PTP4A2-211	ENST00000528840	ZAP70	P43403	619 aa		13.93	□□□□□ -0.18
PTP4A2-211	ENST00000528840	DYNLL1	P63167	89 aa	Known RBP	13.93	□□□□□ -0.18
PTP4A2-211	ENST00000528840	CCAR1	Q8IX12	1150 aa	Known RBP	13.93	□□□□□ -0.18
PTP4A2-211	ENST00000528840	RBPJL	Q9UBG7	517 aa		13.93	□□□□□ -0.18
PTP4A2-211	ENST00000528840	MORF4L1	Q9UBU8	362 aa		13.93	□□□□□ -0.18
PTP4A2-211	ENST00000528840	COL2A1	P02458	1487 aa	Predicted RBP	13.93	□□□□□ -0.18
PTP4A2-211	ENST00000528840	CYP7A1	P22680	504 aa		13.92	□□□□□ -0.18
PTP4A2-211	ENST00000528840	HERVK_113	P62684	666 aa		13.92	□□□□□ -0.18
PTP4A2-211	ENST00000528840		Q3C1V9	767 aa		13.92	□□□□□ -0.18
PTP4A2-211	ENST00000528840	ZKSCAN2	Q63HK3	967 aa		13.92	□□□□□ -0.18
PTP4A2-211	ENST00000528840	METTL16	Q86W50	562 aa	Known RBP	13.92	□□□□□ -0.18
PTP4A2-211	ENST00000528840	C7orf61	Q8IZ16	206 aa		13.92	□□□□□ -0.18
PTP4A2-211	ENST00000528840	ANKLE1	Q8NAG6	615 aa		13.92	□□□□□ -0.18
PTP4A2-211	ENST00000528840	SSH3	Q8TE77	659 aa		13.92	□□□□□ -0.18
PTP4A2-211	ENST00000528840	NUDT12	Q9BQG2	462 aa		13.92	□□□□□ -0.18
PTP4A2-211	ENST00000528840	NBPF3	Q9H094	633 aa		13.92	□□□□□ -0.18
PTP4A2-211	ENST00000528840	CCDC8	Q9H0W5	538 aa	Predicted RBP	13.92	□□□□□ -0.18
PTP4A2-211	ENST00000528840	C1orf115	Q9H7X2	142 aa		13.92	□□□□□ -0.18
PTP4A2-211	ENST00000528840	DNAJC18	Q9H819	358 aa		13.92	□□□□□ -0.18
PTP4A2-211	ENST00000528840	TXNRD2	Q9NNW7	524 aa		13.92	□□□□□ -0.18
PTP4A2-211	ENST00000528840	PIH1D3	Q9NQM4	214 aa	Known RBP	13.92	□□□□□ -0.18
PTP4A2-211	ENST00000528840	FLT1	P17948	1338 aa		13.91	□□□□□ -0.18
PTP4A2-211	ENST00000528840	TRIB2	Q92519	343 aa		13.91	□□□□□ -0.18
PTP4A2-211	ENST00000528840	ZNF512B	Q96KM6	892 aa	Predicted RBP	13.91	□□□□□ -0.18
PTP4A2-211	ENST00000528840	EMILIN3	Q9NT22	766 aa		13.91	□□□□□ -0.18
PTP4A2-211	ENST00000528840	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	13.91	□□□□□ -0.18
PTP4A2-211	ENST00000528840		A0A1W2PPC1	479 aa		13.9	□□□□□ -0.18
PTP4A2-211	ENST00000528840	SOX1	O00570	391 aa	Predicted RBP	13.9	□□□□□ -0.18
PTP4A2-211	ENST00000528840	HLA-DOA	P06340	250 aa		13.9	□□□□□ -0.18
PTP4A2-211	ENST00000528840	USP5	P45974	858 aa		13.9	□□□□□ -0.18
PTP4A2-211	ENST00000528840	USP17L2	Q6R6M4	530 aa		13.9	□□□□□ -0.18
PTP4A2-211	ENST00000528840	MIGA1	Q8NAN2	632 aa		13.9	□□□□□ -0.18
PTP4A2-211	ENST00000528840	LRCH3	Q96II8	777 aa		13.9	□□□□□ -0.18
PTP4A2-211	ENST00000528840	PAGR1	Q9BTK6	254 aa		13.9	□□□□□ -0.18
PTP4A2-211	ENST00000528840	C11orf49	Q9H6J7	331 aa		13.9	□□□□□ -0.18
PTP4A2-211	ENST00000528840	GINM1	Q9NU53	330 aa		13.9	□□□□□ -0.18
PTP4A2-211	ENST00000528840	OGDHL	Q9ULD0	1010 aa		13.9	□□□□□ -0.18
PTP4A2-211	ENST00000528840	ZBTB21	Q9ULJ3	1066 aa		13.9	□□□□□ -0.18
PTP4A2-211	ENST00000528840	TRIOBP	Q9H2D6	2365 aa		13.89	□□□□□ -0.19
PTP4A2-211	ENST00000528840	IDH1	O75874	414 aa	Known RBP	13.89	□□□□□ -0.19
PTP4A2-211	ENST00000528840	GH2	P01242	217 aa		13.89	□□□□□ -0.19
PTP4A2-211	ENST00000528840	XRCC5	P13010	732 aa	Known RBP	13.89	□□□□□ -0.19
PTP4A2-211	ENST00000528840	PRKAR2A	P13861	404 aa	Known RBP	13.89	□□□□□ -0.19
PTP4A2-211	ENST00000528840	SYN1	P17600	705 aa		13.89	□□□□□ -0.19
PTP4A2-211	ENST00000528840	MAPK4	P31152	587 aa		13.89	□□□□□ -0.19
PTP4A2-211	ENST00000528840	MNX1	P50219	401 aa	Predicted RBP	13.89	□□□□□ -0.19
PTP4A2-211	ENST00000528840	ERVK-9	P63128	1117 aa		13.89	□□□□□ -0.19
PTP4A2-211	ENST00000528840	ERVK-24	P63145	666 aa		13.89	□□□□□ -0.19
PTP4A2-211	ENST00000528840	PDE3A	Q14432	1141 aa		13.89	□□□□□ -0.19
PTP4A2-211	ENST00000528840	EAF2	Q96CJ1	260 aa	Predicted RBP	13.89	□□□□□ -0.19
PTP4A2-211	ENST00000528840	PORCN	Q9H237	461 aa		13.89	□□□□□ -0.19
PTP4A2-211	ENST00000528840	CWC22	Q9HCG8	908 aa	Known RBP	13.89	□□□□□ -0.19
PTP4A2-211	ENST00000528840	DBNL	Q9UJU6	430 aa	Known RBP	13.89	□□□□□ -0.19
PTP4A2-211	ENST00000528840	CACNB2	Q08289	660 aa	Predicted RBP	13.88	□□□□□ -0.19
PTP4A2-211	ENST00000528840	ZYX	Q15942	572 aa	Known RBP	13.88	□□□□□ -0.19
PTP4A2-211	ENST00000528840	CCL14	Q16627	93 aa		13.88	□□□□□ -0.19
PTP4A2-211	ENST00000528840	MAP3K21	Q5TCX8	1036 aa		13.88	□□□□□ -0.19
PTP4A2-211	ENST00000528840	POTEE	Q6S8J3	1075 aa		13.88	□□□□□ -0.19
PTP4A2-211	ENST00000528840	GPR142	Q7Z601	462 aa		13.88	□□□□□ -0.19
PTP4A2-211	ENST00000528840	PLEKHH3	Q7Z736	793 aa		13.88	□□□□□ -0.19
PTP4A2-211	ENST00000528840	TRMT44	Q8IYL2	757 aa	Known RBP	13.88	□□□□□ -0.19
PTP4A2-211	ENST00000528840	MAGEB6	Q8N7X4	407 aa		13.88	□□□□□ -0.19
PTP4A2-211	ENST00000528840	SLC17A8	Q8NDX2	589 aa		13.88	□□□□□ -0.19
PTP4A2-211	ENST00000528840	SOCS4	Q8WXH5	440 aa		13.88	□□□□□ -0.19
PTP4A2-211	ENST00000528840	GDF15	Q99988	308 aa		13.88	□□□□□ -0.19
PTP4A2-211	ENST00000528840	TLR7	Q9NYK1	1049 aa	Known RBP	13.88	□□□□□ -0.19
PTP4A2-211	ENST00000528840	NOP58	Q9Y2X3	529 aa	Known RBP	13.88	□□□□□ -0.19
PTP4A2-211	ENST00000528840	NDUFB9	Q9Y6M9	179 aa		13.88	□□□□□ -0.19
PTP4A2-211	ENST00000528840	CEP290	O15078	2479 aa		13.88	□□□□□ -0.19
PTP4A2-211	ENST00000528840	ATAD5	Q96QE3	1844 aa		13.87	□□□□□ -0.19
PTP4A2-211	ENST00000528840	ZKSCAN1	P17029	563 aa	Predicted RBP	13.87	□□□□□ -0.19
PTP4A2-211	ENST00000528840	CCND3	P30281	292 aa	Predicted RBP	13.87	□□□□□ -0.19
PTP4A2-211	ENST00000528840	BMP8B	P34820	402 aa		13.87	□□□□□ -0.19
PTP4A2-211	ENST00000528840	RGS2	P41220	211 aa		13.87	□□□□□ -0.19
PTP4A2-211	ENST00000528840	RAB3GAP1	Q15042	981 aa		13.87	□□□□□ -0.19
PTP4A2-211	ENST00000528840	MORN1	Q5T089	497 aa		13.87	□□□□□ -0.19
PTP4A2-211	ENST00000528840	ITPRIP	Q8IWB1	547 aa		13.87	□□□□□ -0.19
PTP4A2-211	ENST00000528840	USP6NL	Q92738	828 aa		13.87	□□□□□ -0.19
PTP4A2-211	ENST00000528840	FEZ1	Q99689	392 aa		13.87	□□□□□ -0.19
PTP4A2-211	ENST00000528840	LOC285556	D6RIA3	1793 aa		13.86	□□□□□ -0.19
PTP4A2-211	ENST00000528840	USP17L15	C9J2P7	530 aa		13.86	□□□□□ -0.19
PTP4A2-211	ENST00000528840	USP17L13	C9JLJ4	530 aa		13.86	□□□□□ -0.19
PTP4A2-211	ENST00000528840	USP17L11	C9JVI0	530 aa		13.86	□□□□□ -0.19
PTP4A2-211	ENST00000528840	USP17L18	D6R9N7	530 aa		13.86	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms