RNA–Protein interactions for RNA: ENST00000528227.5

TRIM3-206, Transcript of tripartite motif containing 3, humanhuman

TSL 5

Gene TRIM3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-206ENST00000528227 GINM1Q9NU53 330 aa31.54■■■□□ 2.64
TRIM3-206ENST00000528227 GDF11O95390 407 aa31.53■■■□□ 2.64
TRIM3-206ENST00000528227 CERS3Q8IU89 383 aa31.53■■■□□ 2.64
TRIM3-206ENST00000528227 MYH1P12882 1939 aa31.52■■■□□ 2.64
TRIM3-206ENST00000528227 INHAP05111 366 aa31.52■■■□□ 2.64
TRIM3-206ENST00000528227 UBE2Q1Q7Z7E8 422 aa31.52■■■□□ 2.64
TRIM3-206ENST00000528227 U2AF1L4Q8WU68 220 aaKnown RBP31.52■■■□□ 2.64
TRIM3-206ENST00000528227 ZBTB21Q9ULJ3 1066 aa31.52■■■□□ 2.64
TRIM3-206ENST00000528227 DOCK3Q8IZD9 2030 aa31.51■■■□□ 2.64
TRIM3-206ENST00000528227 HSP90AB4PQ58FF6 505 aa31.51■■■□□ 2.63
TRIM3-206ENST00000528227 TMED8Q6PL24 325 aaPredicted RBP31.51■■■□□ 2.63
TRIM3-206ENST00000528227 TMOD4Q9NZQ9 345 aa31.51■■■□□ 2.63
TRIM3-206ENST00000528227 C19orf81C9J6K1 198 aa31.5■■■□□ 2.63
TRIM3-206ENST00000528227 MS4A1P11836 297 aa31.5■■■□□ 2.63
TRIM3-206ENST00000528227 HOXA7P31268 230 aaPredicted RBP31.5■■■□□ 2.63
TRIM3-206ENST00000528227 MAP3K12Q12852 859 aa31.5■■■□□ 2.63
TRIM3-206ENST00000528227 RHPN1Q8TCX5 695 aa31.5■■■□□ 2.63
TRIM3-206ENST00000528227 IL1RAPL2Q9NP60 686 aa31.5■■■□□ 2.63
TRIM3-206ENST00000528227 USP5P45974 858 aa31.49■■■□□ 2.63
TRIM3-206ENST00000528227 MORF4L1Q9UBU8 362 aa31.49■■■□□ 2.63
TRIM3-206ENST00000528227 TAOK2Q9UL54 1235 aa31.49■■■□□ 2.63
TRIM3-206ENST00000528227 USP17L10C9JJH3 530 aa31.48■■■□□ 2.63
TRIM3-206ENST00000528227 H0YGN5 161 aa31.48■■■□□ 2.63
TRIM3-206ENST00000528227 SGPL1O95470 568 aa31.48■■■□□ 2.63
TRIM3-206ENST00000528227 IRX3P78415 501 aaPredicted RBP31.48■■■□□ 2.63
TRIM3-206ENST00000528227 TATDN1Q6P1N9 297 aa31.46■■■□□ 2.63
TRIM3-206ENST00000528227 P2RX7Q99572 595 aaKnown RBP31.46■■■□□ 2.63
TRIM3-206ENST00000528227 EHD4Q9H223 541 aa31.46■■■□□ 2.63
TRIM3-206ENST00000528227 COLQQ9Y215 455 aaPredicted RBP31.46■■■□□ 2.63
TRIM3-206ENST00000528227 RPAP2Q8IXW5 612 aaPredicted RBP31.45■■■□□ 2.63
TRIM3-206ENST00000528227 DPF3Q92784 378 aa31.45■■■□□ 2.63
TRIM3-206ENST00000528227 RIOK1Q9BRS2 568 aaKnown RBP31.45■■■□□ 2.63
TRIM3-206ENST00000528227 PAK6Q9NQU5 681 aaPredicted RBP31.45■■■□□ 2.63
TRIM3-206ENST00000528227 SERPINB13Q9UIV8 391 aa31.45■■■□□ 2.63
TRIM3-206ENST00000528227 GJD2Q9UKL4 321 aa31.45■■■□□ 2.63
TRIM3-206ENST00000528227 DDX60LQ5H9U9 1706 aaKnown RBP31.44■■■□□ 2.62
TRIM3-206ENST00000528227 FARP2O94887 1054 aaPredicted RBP31.44■■■□□ 2.62
TRIM3-206ENST00000528227 GH2P01242 217 aa31.44■■■□□ 2.62
TRIM3-206ENST00000528227 HERVK_113P62684 666 aa31.44■■■□□ 2.62
TRIM3-206ENST00000528227 TTF1Q15361 905 aaPredicted RBP31.44■■■□□ 2.62
TRIM3-206ENST00000528227 KIF1BPQ96EK5 621 aa31.44■■■□□ 2.62
TRIM3-206ENST00000528227 HTATIP2Q9BUP3 242 aa31.44■■■□□ 2.62
TRIM3-206ENST00000528227 DDX19BQ9UMR2 479 aa31.44■■■□□ 2.62
TRIM3-206ENST00000528227 PLXNB2O15031 1838 aa31.43■■■□□ 2.62
TRIM3-206ENST00000528227 SIRT2Q8IXJ6 389 aa31.43■■■□□ 2.62
TRIM3-206ENST00000528227 CLASRPQ8N2M8 674 aaKnown RBP31.43■■■□□ 2.62
TRIM3-206ENST00000528227 DEFB118Q96PH6 123 aa31.43■■■□□ 2.62
TRIM3-206ENST00000528227 EMILIN3Q9NT22 766 aa31.43■■■□□ 2.62
TRIM3-206ENST00000528227 ZBTB40Q9NUA8 1239 aa31.43■■■□□ 2.62
TRIM3-206ENST00000528227 COG6Q9Y2V7 657 aa31.43■■■□□ 2.62
TRIM3-206ENST00000528227 CAPN2P17655 700 aa31.42■■■□□ 2.62
TRIM3-206ENST00000528227 TTC6Q86TZ1 520 aa31.42■■■□□ 2.62
TRIM3-206ENST00000528227 TXNRD2Q9NNW7 524 aa31.42■■■□□ 2.62
TRIM3-206ENST00000528227 APBB1O00213 710 aa31.41■■■□□ 2.62
TRIM3-206ENST00000528227 PEX10O60683 326 aa31.41■■■□□ 2.62
TRIM3-206ENST00000528227 HMMRO75330 724 aa31.41■■■□□ 2.62
TRIM3-206ENST00000528227 USP17L2Q6R6M4 530 aa31.41■■■□□ 2.62
TRIM3-206ENST00000528227 PPIL4Q8WUA2 492 aaKnown RBP eCLIP31.41■■■□□ 2.62
TRIM3-206ENST00000528227 MAGEB6P1A0A0J9YX57 407 aa31.4■■■□□ 2.62
TRIM3-206ENST00000528227 TFRCP02786 760 aaKnown RBP31.4■■■□□ 2.62
TRIM3-206ENST00000528227 HMGCRP04035 888 aa31.4■■■□□ 2.62
TRIM3-206ENST00000528227 GPRC5AQ8NFJ5 357 aa31.4■■■□□ 2.62
TRIM3-206ENST00000528227 CRISPLD2Q9H0B8 497 aa31.4■■■□□ 2.62
TRIM3-206ENST00000528227 NAV1Q8NEY1 1877 aa31.4■■■□□ 2.62
TRIM3-206ENST00000528227 PDE6AP16499 860 aa31.39■■■□□ 2.62
TRIM3-206ENST00000528227 SLC9C2Q5TAH2 1124 aa31.39■■■□□ 2.62
TRIM3-206ENST00000528227 C12orf42Q96LP6 360 aa31.39■■■□□ 2.62
TRIM3-206ENST00000528227 XRN2Q9H0D6 950 aaKnown RBP eCLIP31.39■■■□□ 2.62
TRIM3-206ENST00000528227 RBPJLQ9UBG7 517 aa31.39■■■□□ 2.62
TRIM3-206ENST00000528227 IFIT2P09913 472 aaKnown RBP31.38■■■□□ 2.61
TRIM3-206ENST00000528227 FXR1P51114 621 aaKnown RBP eCLIP31.38■■■□□ 2.61
TRIM3-206ENST00000528227 PLCD1P51178 756 aa31.38■■■□□ 2.61
TRIM3-206ENST00000528227 CERKLQ49MI3 558 aaPredicted RBP31.38■■■□□ 2.61
TRIM3-206ENST00000528227 GOLIM4O00461 696 aa31.37■■■□□ 2.61
TRIM3-206ENST00000528227 ABCB5Q2M3G0 1257 aa31.37■■■□□ 2.61
TRIM3-206ENST00000528227 GTF3C2Q8WUA4 911 aaPredicted RBP31.37■■■□□ 2.61
TRIM3-206ENST00000528227 DNAJC2Q99543 621 aaKnown RBP31.37■■■□□ 2.61
TRIM3-206ENST00000528227 FEZ1Q99689 392 aa31.37■■■□□ 2.61
TRIM3-206ENST00000528227 ZNF532Q9HCE3 1301 aa31.36■■■□□ 2.61
TRIM3-206ENST00000528227 RAB11FIP3O75154 756 aa31.36■■■□□ 2.61
TRIM3-206ENST00000528227 SHMT1P34896 483 aa31.36■■■□□ 2.61
TRIM3-206ENST00000528227 ERVK-9P63128 1117 aa31.36■■■□□ 2.61
TRIM3-206ENST00000528227 ERVK-24P63145 666 aa31.36■■■□□ 2.61
TRIM3-206ENST00000528227 RAB3GAP1Q15042 981 aa31.36■■■□□ 2.61
TRIM3-206ENST00000528227 POTEEQ6S8J3 1075 aa31.36■■■□□ 2.61
TRIM3-206ENST00000528227 CRNKL1Q9BZJ0 848 aaKnown RBP31.36■■■□□ 2.61
TRIM3-206ENST00000528227 TCRBV5S4A2TA0A5A2 114 aa31.35■■■□□ 2.61
TRIM3-206ENST00000528227 TRIM32Q13049 653 aa31.35■■■□□ 2.61
TRIM3-206ENST00000528227 ZYXQ15942 572 aaKnown RBP31.35■■■□□ 2.61
TRIM3-206ENST00000528227 Q3C1V9 767 aa31.35■■■□□ 2.61
TRIM3-206ENST00000528227 TRIB2Q92519 343 aa31.35■■■□□ 2.61
TRIM3-206ENST00000528227 POLR3DP05423 398 aaPredicted RBP31.34■■■□□ 2.61
TRIM3-206ENST00000528227 CYP2B6P20813 491 aa31.34■■■□□ 2.61
TRIM3-206ENST00000528227 MAPK4P31152 587 aa31.34■■■□□ 2.61
TRIM3-206ENST00000528227 GABPAQ06546 454 aa31.34■■■□□ 2.61
TRIM3-206ENST00000528227 CHRDL2Q6WN34 429 aa31.34■■■□□ 2.61
TRIM3-206ENST00000528227 SOCS4Q8WXH5 440 aa31.34■■■□□ 2.61
TRIM3-206ENST00000528227 NUDT12Q9BQG2 462 aa31.34■■■□□ 2.61
TRIM3-206ENST00000528227 PAGR1Q9BTK6 254 aa31.34■■■□□ 2.61
TRIM3-206ENST00000528227 KIAA1683Q9H0B3 1180 aa31.34■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms