RNA–Protein interactions for RNA: ENST00000528036.5

PKP3-206, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-206ENST00000528036 GRK4P32298 578 aa27.97■■■□□ 2.07
PKP3-206ENST00000528036 GTF3C2Q8WUA4 911 aaPredicted RBP27.97■■■□□ 2.07
PKP3-206ENST00000528036 CABP5Q9NP86 173 aa27.97■■■□□ 2.07
PKP3-206ENST00000528036 PHIPQ8WWQ0 1821 aa27.97■■■□□ 2.07
PKP3-206ENST00000528036 TCRBV5S4A2TA0A5A2 114 aa27.96■■■□□ 2.07
PKP3-206ENST00000528036 POTEFA5A3E0 1075 aa27.96■■■□□ 2.07
PKP3-206ENST00000528036 CTGFP29279 349 aa27.96■■■□□ 2.07
PKP3-206ENST00000528036 IRX3P78415 501 aaPredicted RBP27.96■■■□□ 2.07
PKP3-206ENST00000528036 MTMR2Q13614 643 aa27.96■■■□□ 2.07
PKP3-206ENST00000528036 CERKLQ49MI3 558 aaPredicted RBP27.96■■■□□ 2.07
PKP3-206ENST00000528036 SLAIN1Q8ND83 568 aa27.96■■■□□ 2.07
PKP3-206ENST00000528036 COA7Q96BR5 231 aa27.96■■■□□ 2.07
PKP3-206ENST00000528036 BCL11AQ9H165 835 aa27.96■■■□□ 2.07
PKP3-206ENST00000528036 TNPO2O14787 897 aaKnown RBP27.95■■■□□ 2.06
PKP3-206ENST00000528036 CAPN2P17655 700 aa27.95■■■□□ 2.06
PKP3-206ENST00000528036 UBXN2AP68543 259 aa27.95■■■□□ 2.06
PKP3-206ENST00000528036 UBE3CQ15386 1083 aa27.95■■■□□ 2.06
PKP3-206ENST00000528036 ANKRD13CQ8N6S4 541 aa27.95■■■□□ 2.06
PKP3-206ENST00000528036 ASCC2Q9H1I8 757 aaPredicted RBP27.95■■■□□ 2.06
PKP3-206ENST00000528036 ATP8A2Q9NTI2 1148 aa27.95■■■□□ 2.06
PKP3-206ENST00000528036 ECHDC1Q9NTX5 307 aa27.95■■■□□ 2.06
PKP3-206ENST00000528036 MYO5AQ9Y4I1 1855 aaKnown RBP27.94■■■□□ 2.06
PKP3-206ENST00000528036 GDF11O95390 407 aa27.94■■■□□ 2.06
PKP3-206ENST00000528036 ADD2P35612 726 aa27.94■■■□□ 2.06
PKP3-206ENST00000528036 USP14P54578 494 aa27.94■■■□□ 2.06
PKP3-206ENST00000528036 IRF5Q13568 498 aa27.94■■■□□ 2.06
PKP3-206ENST00000528036 USP17L2Q6R6M4 530 aa27.94■■■□□ 2.06
PKP3-206ENST00000528036 NKX2-3Q8TAU0 364 aa27.94■■■□□ 2.06
PKP3-206ENST00000528036 DDRGK1Q96HY6 314 aa27.94■■■□□ 2.06
PKP3-206ENST00000528036 MCM9Q9NXL9 1143 aa27.94■■■□□ 2.06
PKP3-206ENST00000528036 PTPRFP10586 1907 aa27.94■■■□□ 2.06
PKP3-206ENST00000528036 GH2P01242 217 aa27.93■■■□□ 2.06
PKP3-206ENST00000528036 ABCB5Q2M3G0 1257 aa27.93■■■□□ 2.06
PKP3-206ENST00000528036 PRPF38BQ5VTL8 546 aaKnown RBP27.93■■■□□ 2.06
PKP3-206ENST00000528036 AMOTL1Q8IY63 956 aa27.93■■■□□ 2.06
PKP3-206ENST00000528036 SH3TC2Q8TF17 1288 aa27.93■■■□□ 2.06
PKP3-206ENST00000528036 PDE4DIPQ5VU43 2346 aa27.93■■■□□ 2.06
PKP3-206ENST00000528036 PRKCZQ05513 592 aa27.92■■■□□ 2.06
PKP3-206ENST00000528036 PXYLP1Q8TE99 480 aa27.92■■■□□ 2.06
PKP3-206ENST00000528036 SWAP70Q9UH65 585 aa27.92■■■□□ 2.06
PKP3-206ENST00000528036 HTTP42858 3142 aa27.92■■■□□ 2.06
PKP3-206ENST00000528036 CDK5RAP2Q96SN8 1893 aa27.91■■■□□ 2.06
PKP3-206ENST00000528036 KIAA0100Q14667 2235 aaKnown RBP27.91■■■□□ 2.06
PKP3-206ENST00000528036 C12orf42Q96LP6 360 aa27.91■■■□□ 2.06
PKP3-206ENST00000528036 DCP1AQ9NPI6 582 aaPredicted RBP27.91■■■□□ 2.06
PKP3-206ENST00000528036 MORF4L1Q9UBU8 362 aa27.91■■■□□ 2.06
PKP3-206ENST00000528036 SIPA1L1O43166 1804 aa27.9■■■□□ 2.06
PKP3-206ENST00000528036 EN2P19622 333 aaPredicted RBP27.9■■■□□ 2.06
PKP3-206ENST00000528036 PLCD1P51178 756 aa27.9■■■□□ 2.06
PKP3-206ENST00000528036 JAG1P78504 1218 aa27.9■■■□□ 2.06
PKP3-206ENST00000528036 GABPAQ06546 454 aa27.9■■■□□ 2.06
PKP3-206ENST00000528036 LRRFIP1Q32MZ4 808 aaKnown RBP27.9■■■□□ 2.06
PKP3-206ENST00000528036 EDC3Q96F86 508 aaKnown RBP27.9■■■□□ 2.06
PKP3-206ENST00000528036 FEZ1Q99689 392 aa27.9■■■□□ 2.06
PKP3-206ENST00000528036 BIN2Q9UBW5 565 aaPredicted RBP27.9■■■□□ 2.06
PKP3-206ENST00000528036 LOC285556D6RIA3 1793 aa27.9■■■□□ 2.06
PKP3-206ENST00000528036 ATAD5Q96QE3 1844 aa27.9■■■□□ 2.06
PKP3-206ENST00000528036 RBBP6Q7Z6E9 1792 aaKnown RBP27.89■■■□□ 2.06
PKP3-206ENST00000528036 ECM2O94769 699 aaPredicted RBP27.89■■■□□ 2.06
PKP3-206ENST00000528036 FLT3LGP49771 235 aa27.89■■■□□ 2.06
PKP3-206ENST00000528036 LCORLQ8N3X6 602 aa27.89■■■□□ 2.06
PKP3-206ENST00000528036 KIAA1683Q9H0B3 1180 aa27.89■■■□□ 2.06
PKP3-206ENST00000528036 ADCY3O60266 1144 aa27.88■■■□□ 2.05
PKP3-206ENST00000528036 SHMT1P34896 483 aa27.88■■■□□ 2.05
PKP3-206ENST00000528036 RRP1P56182 461 aaKnown RBP27.88■■■□□ 2.05
PKP3-206ENST00000528036 RAB3GAP1Q15042 981 aa27.88■■■□□ 2.05
PKP3-206ENST00000528036 MYH1P12882 1939 aa27.88■■■□□ 2.05
PKP3-206ENST00000528036 SMARCA5O60264 1052 aaPredicted RBP27.87■■■□□ 2.05
PKP3-206ENST00000528036 MBD4O95243 580 aa27.87■■■□□ 2.05
PKP3-206ENST00000528036 SDR42E1Q8WUS8 393 aa27.87■■■□□ 2.05
PKP3-206ENST00000528036 ARMT1Q9H993 441 aa27.87■■■□□ 2.05
PKP3-206ENST00000528036 USP17L15C9J2P7 530 aa27.86■■■□□ 2.05
PKP3-206ENST00000528036 USP17L13C9JLJ4 530 aa27.86■■■□□ 2.05
PKP3-206ENST00000528036 USP17L11C9JVI0 530 aa27.86■■■□□ 2.05
PKP3-206ENST00000528036 USP17L18D6R9N7 530 aa27.86■■■□□ 2.05
PKP3-206ENST00000528036 USP17L22D6RA61 530 aa27.86■■■□□ 2.05
PKP3-206ENST00000528036 USP17L17D6RBQ6 530 aa27.86■■■□□ 2.05
PKP3-206ENST00000528036 USP17L19D6RCP7 530 aa27.86■■■□□ 2.05
PKP3-206ENST00000528036 USP17L20D6RJB6 530 aa27.86■■■□□ 2.05
PKP3-206ENST00000528036 HERVK_113P62684 666 aa27.86■■■□□ 2.05
PKP3-206ENST00000528036 USP17L24Q0WX57 530 aa27.86■■■□□ 2.05
PKP3-206ENST00000528036 GPRC5AQ8NFJ5 357 aa27.86■■■□□ 2.05
PKP3-206ENST00000528036 P2RX7Q99572 595 aaKnown RBP27.86■■■□□ 2.05
PKP3-206ENST00000528036 EMILIN3Q9NT22 766 aa27.86■■■□□ 2.05
PKP3-206ENST00000528036 GABRQQ9UN88 632 aa27.86■■■□□ 2.05
PKP3-206ENST00000528036 ERC2O15083 957 aa27.85■■■□□ 2.05
PKP3-206ENST00000528036 GJB1P08034 283 aa27.85■■■□□ 2.05
PKP3-206ENST00000528036 ZFYP08048 801 aaPredicted RBP27.85■■■□□ 2.05
PKP3-206ENST00000528036 AAMPQ13685 434 aa27.85■■■□□ 2.05
PKP3-206ENST00000528036 CCDC17Q96LX7 622 aa27.85■■■□□ 2.05
PKP3-206ENST00000528036 TMEM179Q6ZVK1 233 aa27.84■■■□□ 2.05
PKP3-206ENST00000528036 KBTBD3Q8NAB2 608 aa27.84■■■□□ 2.05
PKP3-206ENST00000528036 ZBTB47Q9UFB7 747 aaPredicted RBP27.84■■■□□ 2.05
PKP3-206ENST00000528036 TTC41PQ6P2S7 1318 aa27.84■■■□□ 2.05
PKP3-206ENST00000528036 MAPK4P31152 587 aa27.83■■■□□ 2.05
PKP3-206ENST00000528036 RNF208Q9H0X6 261 aa27.83■■■□□ 2.05
PKP3-206ENST00000528036 CCL5P13501 91 aa27.82■■■□□ 2.04
PKP3-206ENST00000528036 GJA8P48165 433 aa27.82■■■□□ 2.04
PKP3-206ENST00000528036 SHROOM1Q2M3G4 852 aaPredicted RBP27.82■■■□□ 2.04
PKP3-206ENST00000528036 GIMAP6Q6P9H5 292 aa27.82■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms