RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 GDF11O95390 407 aa39.86■■■■□ 3.97
SSSCA1-205ENST00000527920 PLCD1P51178 756 aa39.86■■■■□ 3.97
SSSCA1-205ENST00000527920 HMGCS2P54868 508 aa39.86■■■■□ 3.97
SSSCA1-205ENST00000527920 GABPAQ06546 454 aa39.86■■■■□ 3.97
SSSCA1-205ENST00000527920 PNMA3Q9UL41 463 aa39.86■■■■□ 3.97
SSSCA1-205ENST00000527920 LOC285556D6RIA3 1793 aa39.86■■■■□ 3.97
SSSCA1-205ENST00000527920 NAV1Q8NEY1 1877 aa39.85■■■■□ 3.97
SSSCA1-205ENST00000527920 BACE1P56817 501 aa39.85■■■■□ 3.97
SSSCA1-205ENST00000527920 SDR42E1Q8WUS8 393 aa39.85■■■■□ 3.97
SSSCA1-205ENST00000527920 GCC1Q96CN9 775 aa39.85■■■■□ 3.97
SSSCA1-205ENST00000527920 ERC2O15083 957 aa39.84■■■■□ 3.97
SSSCA1-205ENST00000527920 PRMT2P55345 433 aa39.84■■■■□ 3.97
SSSCA1-205ENST00000527920 PABPC4Q13310 644 aaKnown RBP eCLIP39.84■■■■□ 3.974e-8■■■■□ 20.3
SSSCA1-205ENST00000527920 SLFNL1Q499Z3 407 aa39.84■■■■□ 3.97
SSSCA1-205ENST00000527920 TREML2Q5T2D2 321 aa39.84■■■■□ 3.97
SSSCA1-205ENST00000527920 TSHZ3Q63HK5 1081 aa39.84■■■■□ 3.97
SSSCA1-205ENST00000527920 ARHGAP39Q9C0H5 1083 aa39.84■■■■□ 3.97
SSSCA1-205ENST00000527920 MYH7P12883 1935 aa39.83■■■■□ 3.97
SSSCA1-205ENST00000527920 C19orf81C9J6K1 198 aa39.83■■■■□ 3.97
SSSCA1-205ENST00000527920 GH2P01242 217 aa39.82■■■■□ 3.97
SSSCA1-205ENST00000527920 SHMT1P34896 483 aa39.82■■■■□ 3.97
SSSCA1-205ENST00000527920 MTMR2Q13614 643 aa39.82■■■■□ 3.97
SSSCA1-205ENST00000527920 SHROOM1Q2M3G4 852 aaPredicted RBP39.82■■■■□ 3.97
SSSCA1-205ENST00000527920 SMCR8Q8TEV9 937 aaPredicted RBP39.82■■■■□ 3.97
SSSCA1-205ENST00000527920 ARMC5Q96C12 935 aa39.82■■■■□ 3.97
SSSCA1-205ENST00000527920 CERKLQ49MI3 558 aaPredicted RBP39.81■■■■□ 3.96
SSSCA1-205ENST00000527920 USP17L10C9JJH3 530 aa39.8■■■■□ 3.96
SSSCA1-205ENST00000527920 GLRX3O76003 335 aaKnown RBP39.8■■■■□ 3.96
SSSCA1-205ENST00000527920 CHGBP05060 677 aa39.8■■■■□ 3.96
SSSCA1-205ENST00000527920 ZFYP08048 801 aaPredicted RBP39.8■■■■□ 3.96
SSSCA1-205ENST00000527920 SOX10P56693 466 aa39.8■■■■□ 3.96
SSSCA1-205ENST00000527920 PI4K2BQ8TCG2 481 aa39.8■■■■□ 3.96
SSSCA1-205ENST00000527920 PSMC4P43686 418 aa39.79■■■■□ 3.96
SSSCA1-205ENST00000527920 TRIM47Q96LD4 638 aa39.79■■■■□ 3.96
SSSCA1-205ENST00000527920 PUS7LQ9H0K6 701 aaKnown RBP39.79■■■■□ 3.96
SSSCA1-205ENST00000527920 TMOD4Q9NZQ9 345 aa39.79■■■■□ 3.96
SSSCA1-205ENST00000527920 ZBTB47Q9UFB7 747 aaPredicted RBP39.79■■■■□ 3.96
SSSCA1-205ENST00000527920 PRKAB2O43741 272 aa39.78■■■■□ 3.96
SSSCA1-205ENST00000527920 MX1P20591 662 aa39.78■■■■□ 3.96
SSSCA1-205ENST00000527920 MLLT1Q03111 559 aaPredicted RBP39.78■■■■□ 3.96
SSSCA1-205ENST00000527920 ABCB5Q2M3G0 1257 aa39.78■■■■□ 3.96
SSSCA1-205ENST00000527920 SALL3Q9BXA9 1300 aa39.78■■■■□ 3.96
SSSCA1-205ENST00000527920 PTCH2Q9Y6C5 1203 aa39.78■■■■□ 3.96
SSSCA1-205ENST00000527920 HOXD10P28358 340 aa39.77■■■■□ 3.96
SSSCA1-205ENST00000527920 CTGFP29279 349 aa39.77■■■■□ 3.96
SSSCA1-205ENST00000527920 LRRFIP1Q32MZ4 808 aaKnown RBP39.77■■■■□ 3.96
SSSCA1-205ENST00000527920 OTUD7AQ8TE49 926 aaPredicted RBP39.77■■■■□ 3.96
SSSCA1-205ENST00000527920 DDRGK1Q96HY6 314 aa39.77■■■■□ 3.96
SSSCA1-205ENST00000527920 SWAP70Q9UH65 585 aa39.77■■■■□ 3.96
SSSCA1-205ENST00000527920 OSBPP22059 807 aa39.76■■■■□ 3.96
SSSCA1-205ENST00000527920 GCLCP48506 637 aaPredicted RBP39.76■■■■□ 3.96
SSSCA1-205ENST00000527920 APPBP2Q92624 585 aa39.76■■■■□ 3.96
SSSCA1-205ENST00000527920 CABP5Q9NP86 173 aa39.76■■■■□ 3.96
SSSCA1-205ENST00000527920 SRRDQ9UH36 339 aa39.76■■■■□ 3.96
SSSCA1-205ENST00000527920 RNF113AO15541 343 aaKnown RBP39.75■■■■□ 3.95
SSSCA1-205ENST00000527920 HOXA7P31268 230 aaPredicted RBP39.75■■■■□ 3.95
SSSCA1-205ENST00000527920 FCGRTP55899 365 aa39.75■■■■□ 3.95
SSSCA1-205ENST00000527920 ANKRD45Q5TZF3 282 aa39.75■■■■□ 3.95
SSSCA1-205ENST00000527920 ASCC2Q9H1I8 757 aaPredicted RBP39.75■■■■□ 3.95
SSSCA1-205ENST00000527920 SLC4A4Q9Y6R1 1079 aa39.75■■■■□ 3.95
SSSCA1-205ENST00000527920 FAM110CQ1W6H9 321 aa39.74■■■■□ 3.95
SSSCA1-205ENST00000527920 AMOTL1Q8IY63 956 aa39.74■■■■□ 3.95
SSSCA1-205ENST00000527920 ZSWIM8A7E2V4 1837 aa39.73■■■■□ 3.95
SSSCA1-205ENST00000527920 FMNL1O95466 1100 aaPredicted RBP39.73■■■■□ 3.95
SSSCA1-205ENST00000527920 EVX2Q03828 476 aa39.73■■■■□ 3.95
SSSCA1-205ENST00000527920 C12orf60Q5U649 245 aa39.73■■■■□ 3.95
SSSCA1-205ENST00000527920 STRBPQ96SI9 672 aaKnown RBP39.73■■■■□ 3.95
SSSCA1-205ENST00000527920 CYP2D6P10635 497 aa39.72■■■■□ 3.95
SSSCA1-205ENST00000527920 SLC9C1Q4G0N8 1177 aa39.72■■■■□ 3.95
SSSCA1-205ENST00000527920 USP17L2Q6R6M4 530 aa39.72■■■■□ 3.95
SSSCA1-205ENST00000527920 NBPF11Q86T75 865 aa39.72■■■■□ 3.95
SSSCA1-205ENST00000527920 C12orf42Q96LP6 360 aa39.72■■■■□ 3.95
SSSCA1-205ENST00000527920 RAB3GAP1Q15042 981 aa39.71■■■■□ 3.95
SSSCA1-205ENST00000527920 GIMAP6Q6P9H5 292 aa39.71■■■■□ 3.95
SSSCA1-205ENST00000527920 OSBP2Q969R2 916 aa39.71■■■■□ 3.95
SSSCA1-205ENST00000527920 KIAA1683Q9H0B3 1180 aa39.71■■■■□ 3.95
SSSCA1-205ENST00000527920 ZNF333Q96JL9 665 aa39.7■■■■□ 3.95
SSSCA1-205ENST00000527920 RWDD1Q9H446 243 aaPredicted RBP39.7■■■■□ 3.95
SSSCA1-205ENST00000527920 EMILIN3Q9NT22 766 aa39.7■■■■□ 3.95
SSSCA1-205ENST00000527920 STAP2Q9UGK3 403 aa39.7■■■■□ 3.95
SSSCA1-205ENST00000527920 USP17L12C9JPN9 530 aa39.69■■■■□ 3.94
SSSCA1-205ENST00000527920 USP17L21D6R901 530 aa39.69■■■■□ 3.94
SSSCA1-205ENST00000527920 USP14P54578 494 aa39.69■■■■□ 3.94
SSSCA1-205ENST00000527920 IRX3P78415 501 aaPredicted RBP39.69■■■■□ 3.94
SSSCA1-205ENST00000527920 ANKRD13CQ8N6S4 541 aa39.69■■■■□ 3.94
SSSCA1-205ENST00000527920 GUCY1A2P33402 732 aa39.68■■■■□ 3.94
SSSCA1-205ENST00000527920 SMC5Q8IY18 1101 aa39.68■■■■□ 3.94
SSSCA1-205ENST00000527920 FEZ1Q99689 392 aa39.68■■■■□ 3.94
SSSCA1-205ENST00000527920 ARPP21Q9UBL0 812 aaPredicted RBP39.68■■■■□ 3.94
SSSCA1-205ENST00000527920 EXOC6Q8TAG9 804 aa39.67■■■■□ 3.94
SSSCA1-205ENST00000527920 MYPNQ86TC9 1320 aa39.66■■■■□ 3.94
SSSCA1-205ENST00000527920 GNAT2P19087 354 aa39.66■■■■□ 3.94
SSSCA1-205ENST00000527920 CTR9Q6PD62 1173 aa39.66■■■■□ 3.94
SSSCA1-205ENST00000527920 TMEM179Q6ZVK1 233 aa39.66■■■■□ 3.94
SSSCA1-205ENST00000527920 C16orf86Q6ZW13 317 aa39.66■■■■□ 3.94
SSSCA1-205ENST00000527920 SLC44A5Q8NCS7 719 aa39.66■■■■□ 3.94
SSSCA1-205ENST00000527920 DYNLL2Q96FJ2 89 aa39.66■■■■□ 3.94
SSSCA1-205ENST00000527920 CENPFP49454 3210 aa39.66■■■■□ 3.94
SSSCA1-205ENST00000527920 CCDC17Q96LX7 622 aa39.65■■■■□ 3.94
SSSCA1-205ENST00000527920 MORF4L1Q9UBU8 362 aa39.65■■■■□ 3.94
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms