RNA–Protein interactions for RNA: ENST00000527825.1

CHD7-205, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 3

Gene CHD7, Length 434 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-205ENST00000527825 FSHRP23945 695 aa5.25□□□□□ -1.57
CHD7-205ENST00000527825 GMPRP36959 345 aa5.25□□□□□ -1.57
CHD7-205ENST00000527825 PSMC4P43686 418 aa5.25□□□□□ -1.57
CHD7-205ENST00000527825 GTF2A2P52657 109 aa5.25□□□□□ -1.57
CHD7-205ENST00000527825 PTK2Q05397 1052 aa5.25□□□□□ -1.57
CHD7-205ENST00000527825 MAP3K11Q16584 847 aa5.25□□□□□ -1.57
CHD7-205ENST00000527825 SLC10A5Q5PT55 438 aa5.25□□□□□ -1.57
CHD7-205ENST00000527825 NPAS3Q8IXF0 933 aa5.25□□□□□ -1.57
CHD7-205ENST00000527825 ZNF34Q8IZ26 560 aa5.25□□□□□ -1.57
CHD7-205ENST00000527825 TBC1D16Q8TBP0 767 aa5.25□□□□□ -1.57
CHD7-205ENST00000527825 RTF1Q92541 710 aaKnown RBP5.25□□□□□ -1.57
CHD7-205ENST00000527825 IRF7Q92985 503 aa5.25□□□□□ -1.57
CHD7-205ENST00000527825 OPTNQ96CV9 577 aa5.25□□□□□ -1.57
CHD7-205ENST00000527825 DEFB118Q96PH6 123 aa5.25□□□□□ -1.57
CHD7-205ENST00000527825 PTPN18Q99952 460 aa5.25□□□□□ -1.57
CHD7-205ENST00000527825 ARHGAP9Q9BRR9 750 aa5.25□□□□□ -1.57
CHD7-205ENST00000527825 ELP3Q9H9T3 547 aa5.25□□□□□ -1.57
CHD7-205ENST00000527825 SRRDQ9UH36 339 aa5.25□□□□□ -1.57
CHD7-205ENST00000527825 GPSM3Q9Y4H4 160 aa5.25□□□□□ -1.57
CHD7-205ENST00000527825 RANBP2P49792 3224 aaKnown RBP5.25□□□□□ -1.57
CHD7-205ENST00000527825 SSC5DA1L4H1 1573 aa5.25□□□□□ -1.57
CHD7-205ENST00000527825 AK9Q5TCS8 1911 aa5.25□□□□□ -1.57
CHD7-205ENST00000527825 MYO3BQ8WXR4 1341 aa5.24□□□□□ -1.57
CHD7-205ENST00000527825 MYO1BO43795 1136 aa5.24□□□□□ -1.57
CHD7-205ENST00000527825 DDX10Q13206 875 aaKnown RBP5.24□□□□□ -1.57
CHD7-205ENST00000527825 C6orf118Q5T5N4 469 aa5.24□□□□□ -1.57
CHD7-205ENST00000527825 TTLL7Q6ZT98 887 aa5.24□□□□□ -1.57
CHD7-205ENST00000527825 VASH1Q7L8A9 365 aaPredicted RBP5.24□□□□□ -1.57
CHD7-205ENST00000527825 ZBTB33Q86T24 672 aa5.24□□□□□ -1.57
CHD7-205ENST00000527825 TRMT44Q8IYL2 757 aaKnown RBP5.24□□□□□ -1.57
CHD7-205ENST00000527825 P2RX7Q99572 595 aaKnown RBP5.24□□□□□ -1.57
CHD7-205ENST00000527825 LBHD1Q9BQE6 289 aaPredicted RBP5.24□□□□□ -1.57
CHD7-205ENST00000527825 OCSTAMPQ9BR26 566 aa5.24□□□□□ -1.57
CHD7-205ENST00000527825 DEFB129Q9H1M3 183 aa5.24□□□□□ -1.57
CHD7-205ENST00000527825 TRMT112Q9UI30 125 aaKnown RBP5.24□□□□□ -1.57
CHD7-205ENST00000527825 GGA1Q9UJY5 639 aa5.24□□□□□ -1.57
CHD7-205ENST00000527825 MAP4K5Q9Y4K4 846 aa5.24□□□□□ -1.57
CHD7-205ENST00000527825 PPP2R3BQ9Y5P8 575 aa5.24□□□□□ -1.57
CHD7-205ENST00000527825 ZBED9Q6R2W3 1325 aa5.23□□□□□ -1.57
CHD7-205ENST00000527825 SH3TC1Q8TE82 1336 aa5.23□□□□□ -1.57
CHD7-205ENST00000527825 DIAPH1O60610 1272 aaKnown RBP5.23□□□□□ -1.57
CHD7-205ENST00000527825 MMP14P50281 582 aa5.23□□□□□ -1.57
CHD7-205ENST00000527825 FCGRTP55899 365 aa5.23□□□□□ -1.57
CHD7-205ENST00000527825 HSP90AB3PQ58FF7 597 aa5.23□□□□□ -1.57
CHD7-205ENST00000527825 PODNQ7Z5L7 613 aa5.23□□□□□ -1.57
CHD7-205ENST00000527825 MEIOBQ8N635 442 aa5.23□□□□□ -1.57
CHD7-205ENST00000527825 ADAMTS19Q8TE59 1207 aa5.23□□□□□ -1.57
CHD7-205ENST00000527825 BRI3BPQ8WY22 251 aa5.23□□□□□ -1.57
CHD7-205ENST00000527825 UHRF1Q96T88 793 aaPredicted RBP5.23□□□□□ -1.57
CHD7-205ENST00000527825 GMLQ99445 158 aa5.23□□□□□ -1.57
CHD7-205ENST00000527825 SEMA6BQ9H3T3 888 aa5.23□□□□□ -1.57
CHD7-205ENST00000527825 C11orf49Q9H6J7 331 aa5.23□□□□□ -1.57
CHD7-205ENST00000527825 CSADQ9Y600 493 aa5.23□□□□□ -1.57
CHD7-205ENST00000527825 NDUFB9Q9Y6M9 179 aa5.23□□□□□ -1.57
CHD7-205ENST00000527825 COL4A1P02462 1669 aa5.22□□□□□ -1.57
CHD7-205ENST00000527825 CEMIPQ8WUJ3 1361 aa5.22□□□□□ -1.57
CHD7-205ENST00000527825 U2SURPO15042 1029 aaKnown RBP5.22□□□□□ -1.57
CHD7-205ENST00000527825 ADCY3O60266 1144 aa5.22□□□□□ -1.57
CHD7-205ENST00000527825 INHAP05111 366 aa5.22□□□□□ -1.57
CHD7-205ENST00000527825 CETPP11597 493 aa5.22□□□□□ -1.57
CHD7-205ENST00000527825 DLGAP5Q15398 846 aa5.22□□□□□ -1.57
CHD7-205ENST00000527825 LINC00528Q8N1L1 170 aa5.22□□□□□ -1.57
CHD7-205ENST00000527825 FAM43AQ8N2R8 423 aa5.22□□□□□ -1.57
CHD7-205ENST00000527825 ADAM32Q8TC27 787 aa5.22□□□□□ -1.57
CHD7-205ENST00000527825 DIS3LQ8TF46 1054 aaKnown RBP5.22□□□□□ -1.57
CHD7-205ENST00000527825 ATXN2LQ8WWM7 1075 aaKnown RBP5.22□□□□□ -1.57
CHD7-205ENST00000527825 PPM1EQ8WY54 764 aa5.22□□□□□ -1.57
CHD7-205ENST00000527825 CELF1Q92879 486 aaKnown RBP5.22□□□□□ -1.57
CHD7-205ENST00000527825 VEZTQ9HBM0 779 aa5.22□□□□□ -1.57
CHD7-205ENST00000527825 PRM3Q9NNZ6 103 aa5.22□□□□□ -1.57
CHD7-205ENST00000527825 ZCCHC17Q9NP64 241 aaKnown RBP5.22□□□□□ -1.57
CHD7-205ENST00000527825 CPA4Q9UI42 421 aa5.22□□□□□ -1.57
CHD7-205ENST00000527825 DLG5Q8TDM6 1919 aa5.22□□□□□ -1.57
CHD7-205ENST00000527825 ARAP2Q8WZ64 1704 aa5.22□□□□□ -1.57
CHD7-205ENST00000527825 ADGRA2Q96PE1 1338 aa5.22□□□□□ -1.57
CHD7-205ENST00000527825 MAST2Q6P0Q8 1798 aa5.21□□□□□ -1.57
CHD7-205ENST00000527825 MYH3P11055 1940 aa5.21□□□□□ -1.57
CHD7-205ENST00000527825 COL2A1P02458 1487 aaPredicted RBP5.21□□□□□ -1.58
CHD7-205ENST00000527825 LTBP2Q14767 1821 aa5.21□□□□□ -1.58
CHD7-205ENST00000527825 ZBBXA8MT70 800 aa5.21□□□□□ -1.58
CHD7-205ENST00000527825 MAN1A2O60476 641 aa5.21□□□□□ -1.58
CHD7-205ENST00000527825 USP2O75604 605 aaPredicted RBP5.21□□□□□ -1.58
CHD7-205ENST00000527825 UPP2O95045 317 aa5.21□□□□□ -1.58
CHD7-205ENST00000527825 BMP2P12643 396 aa5.21□□□□□ -1.58
CHD7-205ENST00000527825 ELNP15502 786 aa5.21□□□□□ -1.58
CHD7-205ENST00000527825 RPS8P62241 208 aaKnown RBP5.21□□□□□ -1.58
CHD7-205ENST00000527825 EIF4G2P78344 907 aaKnown RBP eCLIP5.21□□□□□ -1.58
CHD7-205ENST00000527825 PRKCZQ05513 592 aa5.21□□□□□ -1.58
CHD7-205ENST00000527825 MCM6Q14566 821 aa5.21□□□□□ -1.58
CHD7-205ENST00000527825 TMEM31Q5JXX7 168 aa5.21□□□□□ -1.58
CHD7-205ENST00000527825 NBPF12Q5TAG4 269 aaPredicted RBP5.21□□□□□ -1.58
CHD7-205ENST00000527825 KIAA0825Q8IV33 1275 aa5.21□□□□□ -1.58
CHD7-205ENST00000527825 CCDC116Q8IYX3 515 aa5.21□□□□□ -1.58
CHD7-205ENST00000527825 PODXL2Q9NZ53 605 aa5.21□□□□□ -1.58
CHD7-205ENST00000527825 THEGQ9P2T0 379 aa5.21□□□□□ -1.58
CHD7-205ENST00000527825 PRKAG2Q9UGJ0 569 aa5.21□□□□□ -1.58
CHD7-205ENST00000527825 DOCK3Q8IZD9 2030 aa5.21□□□□□ -1.58
CHD7-205ENST00000527825 FRMPD3Q5JV73 1810 aa5.2□□□□□ -1.58
CHD7-205ENST00000527825 CLRN2A0PK11 232 aa5.2□□□□□ -1.58
CHD7-205ENST00000527825 BTBD19C9JJ37 291 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms