RNA–Protein interactions for RNA: ENST00000527339.1

LTBP3-208, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 3

Gene LTBP3, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-208ENST00000527339 DCP1AQ9NPI6 582 aaPredicted RBP20.85■□□□□ 0.93
LTBP3-208ENST00000527339 PHIPQ8WWQ0 1821 aa20.85■□□□□ 0.93
LTBP3-208ENST00000527339 TRIOBPQ9H2D6 2365 aa20.84■□□□□ 0.93
LTBP3-208ENST00000527339 PDE4AP27815 886 aa20.84■□□□□ 0.93
LTBP3-208ENST00000527339 GTF2A2P52657 109 aa20.84■□□□□ 0.93
LTBP3-208ENST00000527339 PPATQ06203 517 aa20.84■□□□□ 0.93
LTBP3-208ENST00000527339 EHD4Q9H223 541 aa20.84■□□□□ 0.93
LTBP3-208ENST00000527339 MYH8P13535 1937 aa20.84■□□□□ 0.93
LTBP3-208ENST00000527339 TRIM6-TRIM34B2RNG4 842 aa20.83■□□□□ 0.93
LTBP3-208ENST00000527339 PRKAB2O43741 272 aa20.83■□□□□ 0.93
LTBP3-208ENST00000527339 MYCP01106 439 aaPredicted RBP20.83■□□□□ 0.93
LTBP3-208ENST00000527339 POLR3DP05423 398 aaPredicted RBP20.83■□□□□ 0.93
LTBP3-208ENST00000527339 PPIL2Q13356 520 aa20.83■□□□□ 0.93
LTBP3-208ENST00000527339 SLC4A8Q2Y0W8 1093 aa20.83■□□□□ 0.93
LTBP3-208ENST00000527339 ZMYM1Q5SVZ6 1142 aa20.83■□□□□ 0.93
LTBP3-208ENST00000527339 DDRGK1Q96HY6 314 aa20.83■□□□□ 0.93
LTBP3-208ENST00000527339 STRBPQ96SI9 672 aaKnown RBP20.83■□□□□ 0.93
LTBP3-208ENST00000527339 DNAJC18Q9H819 358 aa20.83■□□□□ 0.93
LTBP3-208ENST00000527339 ZFYVE28Q9HCC9 887 aa20.83■□□□□ 0.93
LTBP3-208ENST00000527339 PICK1Q9NRD5 415 aa20.83■□□□□ 0.93
LTBP3-208ENST00000527339 MCM9Q9NXL9 1143 aa20.83■□□□□ 0.93
LTBP3-208ENST00000527339 SERPINB13Q9UIV8 391 aa20.83■□□□□ 0.93
LTBP3-208ENST00000527339 SLC4A4Q9Y6R1 1079 aa20.83■□□□□ 0.93
LTBP3-208ENST00000527339 BTBD19C9JJ37 291 aa20.82■□□□□ 0.92
LTBP3-208ENST00000527339 IRF6O14896 467 aa20.82■□□□□ 0.92
LTBP3-208ENST00000527339 GPAA1O43292 621 aa20.82■□□□□ 0.92
LTBP3-208ENST00000527339 CTGFP29279 349 aa20.82■□□□□ 0.92
LTBP3-208ENST00000527339 CENPQQ7L2Z9 268 aaPredicted RBP20.82■□□□□ 0.92
LTBP3-208ENST00000527339 PTPRFP10586 1907 aa20.82■□□□□ 0.92
LTBP3-208ENST00000527339 M0R2C6 588 aa20.81■□□□□ 0.92
LTBP3-208ENST00000527339 GNAT2P19087 354 aa20.81■□□□□ 0.92
LTBP3-208ENST00000527339 FXR1P51114 621 aaKnown RBP eCLIP20.81■□□□□ 0.92
LTBP3-208ENST00000527339 SH3TC2Q8TF17 1288 aa20.81■□□□□ 0.92
LTBP3-208ENST00000527339 RILPL2Q969X0 211 aa20.81■□□□□ 0.92
LTBP3-208ENST00000527339 ECM2O94769 699 aaPredicted RBP20.8■□□□□ 0.92
LTBP3-208ENST00000527339 PTPRAP18433 802 aa20.8■□□□□ 0.92
LTBP3-208ENST00000527339 CAP2P40123 477 aa20.8■□□□□ 0.92
LTBP3-208ENST00000527339 PLCD1P51178 756 aa20.8■□□□□ 0.92
LTBP3-208ENST00000527339 SLC9C1Q4G0N8 1177 aa20.8■□□□□ 0.92
LTBP3-208ENST00000527339 GIMAP6Q6P9H5 292 aa20.8■□□□□ 0.92
LTBP3-208ENST00000527339 AMOTL1Q8IY63 956 aa20.8■□□□□ 0.92
LTBP3-208ENST00000527339 SEC62Q99442 399 aaKnown RBP20.8■□□□□ 0.92
LTBP3-208ENST00000527339 TAOK2Q9UL54 1235 aa20.8■□□□□ 0.92
LTBP3-208ENST00000527339 TLR2O60603 784 aa20.79■□□□□ 0.92
LTBP3-208ENST00000527339 SNAPC2Q13487 334 aa20.79■□□□□ 0.92
LTBP3-208ENST00000527339 GINM1Q9NU53 330 aa20.79■□□□□ 0.92
LTBP3-208ENST00000527339 KCNH4Q9UQ05 1017 aa20.79■□□□□ 0.92
LTBP3-208ENST00000527339 GSG1L2A8MUP6 293 aa20.78■□□□□ 0.92
LTBP3-208ENST00000527339 LACTBP83111 547 aaPredicted RBP20.78■□□□□ 0.92
LTBP3-208ENST00000527339 GABPAQ06546 454 aa20.78■□□□□ 0.92
LTBP3-208ENST00000527339 RRP1BQ14684 758 aaKnown RBP20.78■□□□□ 0.92
LTBP3-208ENST00000527339 TATDN1Q6P1N9 297 aa20.78■□□□□ 0.92
LTBP3-208ENST00000527339 CCDC136Q96JN2 1154 aa20.78■□□□□ 0.92
LTBP3-208ENST00000527339 TMEM106CQ9BVX2 250 aa20.78■□□□□ 0.92
LTBP3-208ENST00000527339 HELLSQ9NRZ9 838 aa20.78■□□□□ 0.92
LTBP3-208ENST00000527339 COLQQ9Y215 455 aaPredicted RBP20.78■□□□□ 0.92
LTBP3-208ENST00000527339 USP17L12C9JPN9 530 aa20.77■□□□□ 0.92
LTBP3-208ENST00000527339 USP17L21D6R901 530 aa20.77■□□□□ 0.92
LTBP3-208ENST00000527339 CXCL11O14625 94 aa20.77■□□□□ 0.92
LTBP3-208ENST00000527339 ASNSP08243 561 aa20.77■□□□□ 0.92
LTBP3-208ENST00000527339 CETPP11597 493 aa20.77■□□□□ 0.92
LTBP3-208ENST00000527339 TTC22Q5TAA0 569 aa20.77■□□□□ 0.92
LTBP3-208ENST00000527339 C12orf60Q5U649 245 aa20.77■□□□□ 0.92
LTBP3-208ENST00000527339 TBC1D2Q9BYX2 928 aa20.77■□□□□ 0.92
LTBP3-208ENST00000527339 ARPP21Q9UBL0 812 aaPredicted RBP20.77■□□□□ 0.92
LTBP3-208ENST00000527339 ZHX2Q9Y6X8 837 aa20.77■□□□□ 0.92
LTBP3-208ENST00000527339 PATL2C9JE40 543 aaKnown RBP20.76■□□□□ 0.91
LTBP3-208ENST00000527339 CYP2D6P10635 497 aa20.76■□□□□ 0.91
LTBP3-208ENST00000527339 CTR9Q6PD62 1173 aa20.76■□□□□ 0.91
LTBP3-208ENST00000527339 SWAP70Q9UH65 585 aa20.76■□□□□ 0.91
LTBP3-208ENST00000527339 AFG3L2Q9Y4W6 797 aa20.76■□□□□ 0.91
LTBP3-208ENST00000527339 GDF11O95390 407 aa20.75■□□□□ 0.91
LTBP3-208ENST00000527339 SDSP20132 328 aa20.75■□□□□ 0.91
LTBP3-208ENST00000527339 SHMT1P34896 483 aa20.75■□□□□ 0.91
LTBP3-208ENST00000527339 EVX2Q03828 476 aa20.75■□□□□ 0.91
LTBP3-208ENST00000527339 MOGSQ13724 837 aa20.75■□□□□ 0.91
LTBP3-208ENST00000527339 MTFR1Q15390 333 aa20.75■□□□□ 0.91
LTBP3-208ENST00000527339 SBK1Q52WX2 424 aa20.75■□□□□ 0.91
LTBP3-208ENST00000527339 C17orf99Q6UX52 265 aa20.75■□□□□ 0.91
LTBP3-208ENST00000527339 SHISA4Q96DD7 197 aa20.75■□□□□ 0.91
LTBP3-208ENST00000527339 FAM227BQ96M60 508 aa20.75■□□□□ 0.91
LTBP3-208ENST00000527339 EPB41L4AQ9HCS5 686 aaPredicted RBP20.75■□□□□ 0.91
LTBP3-208ENST00000527339 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.75■□□□□ 0.91
LTBP3-208ENST00000527339 A0A0D9SFI3 127 aa20.74■□□□□ 0.91
LTBP3-208ENST00000527339 USP17L5A8MUK1 530 aa20.74■□□□□ 0.91
LTBP3-208ENST00000527339 HIP1O00291 1037 aa20.74■□□□□ 0.91
LTBP3-208ENST00000527339 APPP05067 770 aa20.74■□□□□ 0.91
LTBP3-208ENST00000527339 GSPT1P15170 499 aaKnown RBP20.74■□□□□ 0.91
LTBP3-208ENST00000527339 TDO2P48775 406 aa20.74■□□□□ 0.91
LTBP3-208ENST00000527339 NMIQ13287 307 aaPredicted RBP20.74■□□□□ 0.91
LTBP3-208ENST00000527339 CERKLQ49MI3 558 aaPredicted RBP20.74■□□□□ 0.91
LTBP3-208ENST00000527339 MCMDC2Q4G0Z9 681 aa20.74■□□□□ 0.91
LTBP3-208ENST00000527339 ERICH6BQ5W0A0 696 aa20.74■□□□□ 0.91
LTBP3-208ENST00000527339 NBPF11Q86T75 865 aa20.74■□□□□ 0.91
LTBP3-208ENST00000527339 NACAP1Q9BZK3 213 aa20.74■□□□□ 0.91
LTBP3-208ENST00000527339 AS3MTQ9HBK9 375 aa20.74■□□□□ 0.91
LTBP3-208ENST00000527339 CPA4Q9UI42 421 aa20.74■□□□□ 0.91
LTBP3-208ENST00000527339 ZBTB21Q9ULJ3 1066 aa20.74■□□□□ 0.91
LTBP3-208ENST00000527339 ADGRA2Q96PE1 1338 aa20.74■□□□□ 0.91
LTBP3-208ENST00000527339 CYP2D7A0A087X1C5 515 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms