RNA–Protein interactions for RNA: ENST00000527133.2

CLNS1A-207, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3

Gene CLNS1A, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-207ENST00000527133 MAPK4P31152 587 aa16.05■□□□□ 0.16
CLNS1A-207ENST00000527133 JAG1P78504 1218 aa16.05■□□□□ 0.16
CLNS1A-207ENST00000527133 CCL14Q16627 93 aa16.05■□□□□ 0.16
CLNS1A-207ENST00000527133 GORABQ5T7V8 394 aa16.05■□□□□ 0.16
CLNS1A-207ENST00000527133 LHX8Q68G74 356 aa16.05■□□□□ 0.16
CLNS1A-207ENST00000527133 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.05■□□□□ 0.16
CLNS1A-207ENST00000527133 PORCNQ9H237 461 aa16.05■□□□□ 0.16
CLNS1A-207ENST00000527133 PI4KBQ9UBF8 816 aa16.05■□□□□ 0.16
CLNS1A-207ENST00000527133 RBPJLQ9UBG7 517 aa16.05■□□□□ 0.16
CLNS1A-207ENST00000527133 NOB1Q9ULX3 412 aaKnown RBP16.05■□□□□ 0.16
CLNS1A-207ENST00000527133 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.05■□□□□ 0.16
CLNS1A-207ENST00000527133 SRGAP3O43295 1099 aa16.04■□□□□ 0.16
CLNS1A-207ENST00000527133 RGS2P41220 211 aa16.04■□□□□ 0.16
CLNS1A-207ENST00000527133 ERVK-9P63128 1117 aa16.04■□□□□ 0.16
CLNS1A-207ENST00000527133 ERVK-24P63145 666 aa16.04■□□□□ 0.16
CLNS1A-207ENST00000527133 SLFN5Q08AF3 891 aa16.04■□□□□ 0.16
CLNS1A-207ENST00000527133 SHROOM1Q2M3G4 852 aaPredicted RBP16.04■□□□□ 0.16
CLNS1A-207ENST00000527133 Q3C1V9 767 aa16.04■□□□□ 0.16
CLNS1A-207ENST00000527133 GPR142Q7Z601 462 aa16.04■□□□□ 0.16
CLNS1A-207ENST00000527133 USP6NLQ92738 828 aa16.04■□□□□ 0.16
CLNS1A-207ENST00000527133 NOL10Q9BSC4 688 aaKnown RBP16.04■□□□□ 0.16
CLNS1A-207ENST00000527133 PAGR1Q9BTK6 254 aa16.04■□□□□ 0.16
CLNS1A-207ENST00000527133 C19orf81C9J6K1 198 aa16.03■□□□□ 0.16
CLNS1A-207ENST00000527133 USP17L10C9JJH3 530 aa16.03■□□□□ 0.16
CLNS1A-207ENST00000527133 GDF11O95390 407 aa16.03■□□□□ 0.16
CLNS1A-207ENST00000527133 MORN1Q5T089 497 aa16.03■□□□□ 0.16
CLNS1A-207ENST00000527133 PLEKHH3Q7Z736 793 aa16.03■□□□□ 0.16
CLNS1A-207ENST00000527133 FAM161BQ96MY7 647 aa16.03■□□□□ 0.16
CLNS1A-207ENST00000527133 GUCD1Q96NT3 240 aa16.03■□□□□ 0.16
CLNS1A-207ENST00000527133 APBA2Q99767 749 aa16.03■□□□□ 0.16
CLNS1A-207ENST00000527133 DHX36Q9H2U1 1008 aaKnown RBP16.03■□□□□ 0.16
CLNS1A-207ENST00000527133 CWC22Q9HCG8 908 aaKnown RBP16.03■□□□□ 0.16
CLNS1A-207ENST00000527133 LRP2BPQ9P2M1 347 aa16.03■□□□□ 0.16
CLNS1A-207ENST00000527133 SPTBN5Q9NRC6 3674 aaKnown RBP16.03■□□□□ 0.16
CLNS1A-207ENST00000527133 SIPA1L1O43166 1804 aa16.03■□□□□ 0.16
CLNS1A-207ENST00000527133 ARID4AP29374 1257 aaPredicted RBP16.02■□□□□ 0.16
CLNS1A-207ENST00000527133 MAPKAPK5Q8IW41 473 aa16.02■□□□□ 0.16
CLNS1A-207ENST00000527133 CRACR2BQ8N4Y2 399 aaPredicted RBP16.02■□□□□ 0.16
CLNS1A-207ENST00000527133 LBHD1Q9BQE6 289 aaPredicted RBP16.02■□□□□ 0.16
CLNS1A-207ENST00000527133 TRIM34Q9BYJ4 488 aa16.02■□□□□ 0.16
CLNS1A-207ENST00000527133 API5Q9BZZ5 524 aaKnown RBP16.02■□□□□ 0.16
CLNS1A-207ENST00000527133 DNAJC18Q9H819 358 aa16.02■□□□□ 0.16
CLNS1A-207ENST00000527133 AATFQ9NY61 560 aaKnown RBP eCLIP16.02■□□□□ 0.16
CLNS1A-207ENST00000527133 CDH23Q9H251 3354 aa16.02■□□□□ 0.15
CLNS1A-207ENST00000527133 POTEB2H3BUK9 544 aa16.01■□□□□ 0.15
CLNS1A-207ENST00000527133 MCAMP43121 646 aa16.01■□□□□ 0.15
CLNS1A-207ENST00000527133 FAM109BQ6ICB4 259 aaPredicted RBP16.01■□□□□ 0.15
CLNS1A-207ENST00000527133 POTEEQ6S8J3 1075 aa16.01■□□□□ 0.15
CLNS1A-207ENST00000527133 GTF3C2Q8WUA4 911 aaPredicted RBP16.01■□□□□ 0.15
CLNS1A-207ENST00000527133 TGFBRAP1Q8WUH2 860 aa16.01■□□□□ 0.15
CLNS1A-207ENST00000527133 CDCA7LQ96GN5 454 aa16.01■□□□□ 0.15
CLNS1A-207ENST00000527133 SENP6Q9GZR1 1112 aaPredicted RBP16.01■□□□□ 0.15
CLNS1A-207ENST00000527133 ZBTB21Q9ULJ3 1066 aa16.01■□□□□ 0.15
CLNS1A-207ENST00000527133 FLT1P17948 1338 aa16■□□□□ 0.15
CLNS1A-207ENST00000527133 BAG3O95817 575 aa16■□□□□ 0.15
CLNS1A-207ENST00000527133 MAP2K5Q13163 448 aa16■□□□□ 0.15
CLNS1A-207ENST00000527133 NAA16Q6N069 864 aaPredicted RBP16■□□□□ 0.15
CLNS1A-207ENST00000527133 EMILIN3Q9NT22 766 aa16■□□□□ 0.15
CLNS1A-207ENST00000527133 PALD1Q9ULE6 856 aa16■□□□□ 0.15
CLNS1A-207ENST00000527133 NDUFB9Q9Y6M9 179 aa16■□□□□ 0.15
CLNS1A-207ENST00000527133 PLCG2P16885 1265 aa15.99■□□□□ 0.15
CLNS1A-207ENST00000527133 ATN1P54259 1190 aaPredicted RBP15.99■□□□□ 0.15
CLNS1A-207ENST00000527133 WDR78Q5VTH9 848 aa15.99■□□□□ 0.15
CLNS1A-207ENST00000527133 MFSD14CQ5VZR4 134 aa15.99■□□□□ 0.15
CLNS1A-207ENST00000527133 USP17L2Q6R6M4 530 aa15.99■□□□□ 0.15
CLNS1A-207ENST00000527133 METTL16Q86W50 562 aaKnown RBP15.99■□□□□ 0.15
CLNS1A-207ENST00000527133 FOXP4Q8IVH2 680 aaPredicted RBP15.99■□□□□ 0.15
CLNS1A-207ENST00000527133 SNRKQ9NRH2 765 aa15.99■□□□□ 0.15
CLNS1A-207ENST00000527133 GINM1Q9NU53 330 aa15.99■□□□□ 0.15
CLNS1A-207ENST00000527133 SAP30BPQ9UHR5 308 aaKnown RBP15.99■□□□□ 0.15
CLNS1A-207ENST00000527133 FRMPD3Q5JV73 1810 aa15.98■□□□□ 0.15
CLNS1A-207ENST00000527133 GNAI3P08754 354 aa15.98■□□□□ 0.15
CLNS1A-207ENST00000527133 UQCRFS1P1P0C7P4 283 aa15.98■□□□□ 0.15
CLNS1A-207ENST00000527133 CNGA1P29973 690 aa15.98■□□□□ 0.15
CLNS1A-207ENST00000527133 MTX1Q13505 466 aa15.98■□□□□ 0.15
CLNS1A-207ENST00000527133 ZYXQ15942 572 aaKnown RBP15.98■□□□□ 0.15
CLNS1A-207ENST00000527133 EDC3Q96F86 508 aaKnown RBP15.98■□□□□ 0.15
CLNS1A-207ENST00000527133 FLRT1Q9NZU1 646 aa15.98■□□□□ 0.15
CLNS1A-207ENST00000527133 MAST2Q6P0Q8 1798 aa15.98■□□□□ 0.15
CLNS1A-207ENST00000527133 CNMDO75829 334 aa15.97■□□□□ 0.15
CLNS1A-207ENST00000527133 GLRX3O76003 335 aaKnown RBP15.97■□□□□ 0.15
CLNS1A-207ENST00000527133 PPP4CP60510 307 aa15.97■□□□□ 0.15
CLNS1A-207ENST00000527133 CCNA1P78396 465 aa15.97■□□□□ 0.15
CLNS1A-207ENST00000527133 ZNF697Q5TEC3 545 aa15.97■□□□□ 0.15
CLNS1A-207ENST00000527133 ADGRA1Q86SQ6 560 aa15.97■□□□□ 0.15
CLNS1A-207ENST00000527133 FEZ1Q99689 392 aa15.97■□□□□ 0.15
CLNS1A-207ENST00000527133 PRKAG2Q9UGJ0 569 aa15.97■□□□□ 0.15
CLNS1A-207ENST00000527133 DDX20Q9UHI6 824 aaKnown RBP15.97■□□□□ 0.15
CLNS1A-207ENST00000527133 RABGAP1Q9Y3P9 1069 aa15.97■□□□□ 0.15
CLNS1A-207ENST00000527133 GH2P01242 217 aa15.96■□□□□ 0.15
CLNS1A-207ENST00000527133 HLA-DOAP06340 250 aa15.96■□□□□ 0.15
CLNS1A-207ENST00000527133 G3BP1Q13283 466 aaKnown RBP eCLIP15.96■□□□□ 0.15
CLNS1A-207ENST00000527133 LPAR1Q92633 364 aa15.96■□□□□ 0.15
CLNS1A-207ENST00000527133 CDK5RAP2Q96SN8 1893 aa15.95■□□□□ 0.14
CLNS1A-207ENST00000527133 SLC15A5A6NIM6 579 aa15.95■□□□□ 0.14
CLNS1A-207ENST00000527133 USP17L15C9J2P7 530 aa15.95■□□□□ 0.14
CLNS1A-207ENST00000527133 USP17L13C9JLJ4 530 aa15.95■□□□□ 0.14
CLNS1A-207ENST00000527133 USP17L11C9JVI0 530 aa15.95■□□□□ 0.14
CLNS1A-207ENST00000527133 USP17L18D6R9N7 530 aa15.95■□□□□ 0.14
CLNS1A-207ENST00000527133 USP17L22D6RA61 530 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms