RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 AKR1B1P15121 316 aa12.83□□□□□ -0.36
NEDD8-205ENST00000527046 PTPRAP18433 802 aa12.83□□□□□ -0.36
NEDD8-205ENST00000527046 IREB2P48200 963 aaKnown RBP12.83□□□□□ -0.36
NEDD8-205ENST00000527046 RGMBQ6NW40 437 aa12.83□□□□□ -0.36
NEDD8-205ENST00000527046 SCYL3Q8IZE3 742 aa12.83□□□□□ -0.36
NEDD8-205ENST00000527046 SWAP70Q9UH65 585 aa12.83□□□□□ -0.36
NEDD8-205ENST00000527046 TAOK2Q9UL54 1235 aa12.83□□□□□ -0.36
NEDD8-205ENST00000527046 IGKV6D-41A0A0C4DH26 115 aa12.82□□□□□ -0.36
NEDD8-205ENST00000527046 SLC27A2O14975 620 aa12.82□□□□□ -0.36
NEDD8-205ENST00000527046 ORC4O43929 436 aa12.82□□□□□ -0.36
NEDD8-205ENST00000527046 MOGSQ13724 837 aa12.82□□□□□ -0.36
NEDD8-205ENST00000527046 TTLL12Q14166 644 aaPredicted RBP12.82□□□□□ -0.36
NEDD8-205ENST00000527046 DEFB115Q30KQ5 88 aa12.82□□□□□ -0.36
NEDD8-205ENST00000527046 CERKLQ49MI3 558 aaPredicted RBP12.82□□□□□ -0.36
NEDD8-205ENST00000527046 RASAL3Q86YV0 1011 aa12.82□□□□□ -0.36
NEDD8-205ENST00000527046 CRACR2BQ8N4Y2 399 aaPredicted RBP12.82□□□□□ -0.36
NEDD8-205ENST00000527046 STAG1Q8WVM7 1258 aa12.82□□□□□ -0.36
NEDD8-205ENST00000527046 ELP3Q9H9T3 547 aa12.82□□□□□ -0.36
NEDD8-205ENST00000527046 ANO2Q9NQ90 1003 aa12.82□□□□□ -0.36
NEDD8-205ENST00000527046 IL17RBQ9NRM6 502 aa12.82□□□□□ -0.36
NEDD8-205ENST00000527046 U3KPZ7 1027 aaPredicted RBP12.82□□□□□ -0.36
NEDD8-205ENST00000527046 DOCK1Q14185 1865 aa12.82□□□□□ -0.36
NEDD8-205ENST00000527046 SPDYE5A6NIY4 337 aa12.81□□□□□ -0.36
NEDD8-205ENST00000527046 ZNF213O14771 459 aa12.81□□□□□ -0.36
NEDD8-205ENST00000527046 GH2P01242 217 aa12.81□□□□□ -0.36
NEDD8-205ENST00000527046 SLC10A3P09131 477 aa12.81□□□□□ -0.36
NEDD8-205ENST00000527046 HSPA4P34932 840 aa12.81□□□□□ -0.36
NEDD8-205ENST00000527046 NOVP48745 357 aa12.81□□□□□ -0.36
NEDD8-205ENST00000527046 TSGA10IPQ3SY00 556 aa12.81□□□□□ -0.36
NEDD8-205ENST00000527046 AKNAD1Q5T1N1 836 aa12.81□□□□□ -0.36
NEDD8-205ENST00000527046 SPRYD7Q5W111 196 aa12.81□□□□□ -0.36
NEDD8-205ENST00000527046 CREB3L3Q68CJ9 461 aa12.81□□□□□ -0.36
NEDD8-205ENST00000527046 CYP4F22Q6NT55 531 aa12.81□□□□□ -0.36
NEDD8-205ENST00000527046 CLEC10AQ8IUN9 316 aa12.81□□□□□ -0.36
NEDD8-205ENST00000527046 SLC10A4Q96EP9 437 aa12.81□□□□□ -0.36
NEDD8-205ENST00000527046 DDRGK1Q96HY6 314 aa12.81□□□□□ -0.36
NEDD8-205ENST00000527046 MS4A4AQ96JQ5 239 aa12.81□□□□□ -0.36
NEDD8-205ENST00000527046 CTNNA3Q9UI47 895 aa12.81□□□□□ -0.36
NEDD8-205ENST00000527046 ZBTB21Q9ULJ3 1066 aa12.81□□□□□ -0.36
NEDD8-205ENST00000527046 ABT1Q9ULW3 272 aaKnown RBP12.81□□□□□ -0.36
NEDD8-205ENST00000527046 AFG3L2Q9Y4W6 797 aa12.81□□□□□ -0.36
NEDD8-205ENST00000527046 NEDD4P46934 1319 aa12.81□□□□□ -0.36
NEDD8-205ENST00000527046 MYH8P13535 1937 aa12.8□□□□□ -0.36
NEDD8-205ENST00000527046 A0A1W2PRG0 241 aa12.8□□□□□ -0.36
NEDD8-205ENST00000527046 IRF6O14896 467 aa12.8□□□□□ -0.36
NEDD8-205ENST00000527046 EPB41L2O43491 1005 aaKnown RBP12.8□□□□□ -0.36
NEDD8-205ENST00000527046 VEGFBP49765 207 aa12.8□□□□□ -0.36
NEDD8-205ENST00000527046 SEPT2Q15019 361 aa12.8□□□□□ -0.36
NEDD8-205ENST00000527046 FAM47AQ5JRC9 791 aa12.8□□□□□ -0.36
NEDD8-205ENST00000527046 ERO1BQ86YB8 467 aa12.8□□□□□ -0.36
NEDD8-205ENST00000527046 WNK4Q96J92 1243 aa12.8□□□□□ -0.36
NEDD8-205ENST00000527046 KCNH4Q9UQ05 1017 aa12.8□□□□□ -0.36
NEDD8-205ENST00000527046 E7EWF7 191 aa12.79□□□□□ -0.36
NEDD8-205ENST00000527046 NMT2O60551 498 aa12.79□□□□□ -0.36
NEDD8-205ENST00000527046 ZNF157P51786 506 aaPredicted RBP12.79□□□□□ -0.36
NEDD8-205ENST00000527046 TFAP4Q01664 338 aa12.79□□□□□ -0.36
NEDD8-205ENST00000527046 PPATQ06203 517 aa12.79□□□□□ -0.36
NEDD8-205ENST00000527046 IMMTQ16891 758 aaKnown RBP12.79□□□□□ -0.36
NEDD8-205ENST00000527046 ABCB5Q2M3G0 1257 aa12.79□□□□□ -0.36
NEDD8-205ENST00000527046 ADCK5Q3MIX3 580 aa12.79□□□□□ -0.36
NEDD8-205ENST00000527046 KIAA1755Q5JYT7 1200 aa12.79□□□□□ -0.36
NEDD8-205ENST00000527046 CASC1Q6TDU7 716 aa12.79□□□□□ -0.36
NEDD8-205ENST00000527046 KIAA1211Q6ZU35 1233 aa12.79□□□□□ -0.36
NEDD8-205ENST00000527046 NEDD1Q8NHV4 660 aa12.79□□□□□ -0.36
NEDD8-205ENST00000527046 ACER1Q8TDN7 264 aa12.79□□□□□ -0.36
NEDD8-205ENST00000527046 OPTNQ96CV9 577 aa12.79□□□□□ -0.36
NEDD8-205ENST00000527046 CCDC17Q96LX7 622 aa12.79□□□□□ -0.36
NEDD8-205ENST00000527046 WDR18Q9BV38 432 aa12.79□□□□□ -0.36
NEDD8-205ENST00000527046 GINM1Q9NU53 330 aa12.79□□□□□ -0.36
NEDD8-205ENST00000527046 ZSWIM5Q9P217 1185 aa12.79□□□□□ -0.36
NEDD8-205ENST00000527046 PTPRFP10586 1907 aa12.78□□□□□ -0.36
NEDD8-205ENST00000527046 AOC2O75106 756 aa12.78□□□□□ -0.36
NEDD8-205ENST00000527046 ECE1P42892 770 aa12.78□□□□□ -0.36
NEDD8-205ENST00000527046 ANTXR2P58335 489 aa12.78□□□□□ -0.36
NEDD8-205ENST00000527046 DGKZQ13574 1117 aa12.78□□□□□ -0.36
NEDD8-205ENST00000527046 RCSD1Q6JBY9 416 aa12.78□□□□□ -0.36
NEDD8-205ENST00000527046 PPP4R3CPQ6ZMV5 832 aa12.78□□□□□ -0.36
NEDD8-205ENST00000527046 MFSD6Q6ZSS7 791 aa12.78□□□□□ -0.36
NEDD8-205ENST00000527046 CYB5R4Q7L1T6 521 aa12.78□□□□□ -0.36
NEDD8-205ENST00000527046 AMOTL1Q8IY63 956 aa12.78□□□□□ -0.36
NEDD8-205ENST00000527046 MB21D2Q8IYB1 491 aaPredicted RBP12.78□□□□□ -0.36
NEDD8-205ENST00000527046 OTUD5Q96G74 571 aa12.78□□□□□ -0.36
NEDD8-205ENST00000527046 CAPNS2Q96L46 248 aa12.78□□□□□ -0.36
NEDD8-205ENST00000527046 PTPN18Q99952 460 aa12.78□□□□□ -0.36
NEDD8-205ENST00000527046 MKNK2Q9HBH9 465 aa12.78□□□□□ -0.36
NEDD8-205ENST00000527046 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.78□□□□□ -0.36
NEDD8-205ENST00000527046 SNX14Q9Y5W7 946 aa12.78□□□□□ -0.36
NEDD8-205ENST00000527046 CSADQ9Y600 493 aa12.78□□□□□ -0.36
NEDD8-205ENST00000527046 ZHX2Q9Y6X8 837 aa12.78□□□□□ -0.36
NEDD8-205ENST00000527046 PLIN4Q96Q06 1357 aa12.78□□□□□ -0.36
NEDD8-205ENST00000527046 TESPA1A2RU30 521 aaPredicted RBP12.77□□□□□ -0.37
NEDD8-205ENST00000527046 USP17L5A8MUK1 530 aa12.77□□□□□ -0.37
NEDD8-205ENST00000527046 B4E1Z4 1266 aa12.77□□□□□ -0.37
NEDD8-205ENST00000527046 REC8O95072 547 aa12.77□□□□□ -0.37
NEDD8-205ENST00000527046 ASNSP08243 561 aa12.77□□□□□ -0.37
NEDD8-205ENST00000527046 PCP11498 1178 aaKnown RBP12.77□□□□□ -0.37
NEDD8-205ENST00000527046 PDE4BQ07343 736 aa12.77□□□□□ -0.37
NEDD8-205ENST00000527046 MKRN3Q13064 507 aaKnown RBP12.77□□□□□ -0.37
NEDD8-205ENST00000527046 SPP2Q13103 211 aa12.77□□□□□ -0.37
NEDD8-205ENST00000527046 PPIL2Q13356 520 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms