RNA–Protein interactions for RNA: ENST00000526877.1

SSSCA1-203, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-203ENST00000526877 NOL10Q9BSC4 688 aaKnown RBP15.1■□□□□ 0.01
SSSCA1-203ENST00000526877 OSBPL5Q9H0X9 879 aaPredicted RBP15.1■□□□□ 0.01
SSSCA1-203ENST00000526877 ZFYVE28Q9HCC9 887 aa15.1■□□□□ 0.01
SSSCA1-203ENST00000526877 U3KPZ7 1027 aaPredicted RBP15.1■□□□□ 0.01
SSSCA1-203ENST00000526877 FOCADQ5VW36 1801 aa15.09■□□□□ 0.01
SSSCA1-203ENST00000526877 CXCL11O14625 94 aa15.09■□□□□ 0.01
SSSCA1-203ENST00000526877 TLR2O60603 784 aa15.09■□□□□ 0.01
SSSCA1-203ENST00000526877 CTNND1O60716 968 aaKnown RBP15.09■□□□□ 0.01
SSSCA1-203ENST00000526877 MBD4O95243 580 aa15.09■□□□□ 0.01
SSSCA1-203ENST00000526877 HSPD1P10809 573 aaKnown RBP15.09■□□□□ 0.01
SSSCA1-203ENST00000526877 RNF20Q5VTR2 975 aa15.09■□□□□ 0.01
SSSCA1-203ENST00000526877 TEX11Q8IYF3 940 aa15.09■□□□□ 0.01
SSSCA1-203ENST00000526877 CD99L2Q8TCZ2 262 aa15.09■□□□□ 0.01
SSSCA1-203ENST00000526877 ERO1AQ96HE7 468 aa15.09■□□□□ 0.01
SSSCA1-203ENST00000526877 STRBPQ96SI9 672 aaKnown RBP15.09■□□□□ 0.01
SSSCA1-203ENST00000526877 AATFQ9NY61 560 aaKnown RBP eCLIP15.09■□□□□ 0.01
SSSCA1-203ENST00000526877 TRIM17Q9Y577 477 aa15.09■□□□□ 0.01
SSSCA1-203ENST00000526877 RBM8AQ9Y5S9 174 aaKnown RBP15.09■□□□□ 0.01
SSSCA1-203ENST00000526877 BAG3O95817 575 aa15.08■□□□□ 0
SSSCA1-203ENST00000526877 HSPA4P34932 840 aa15.08■□□□□ 0
SSSCA1-203ENST00000526877 ANAPC15P60006 121 aa15.08■□□□□ 0
SSSCA1-203ENST00000526877 GPAT2Q6NUI2 795 aa15.08■□□□□ 0
SSSCA1-203ENST00000526877 ANKRD23Q86SG2 305 aa15.08■□□□□ 0
SSSCA1-203ENST00000526877 CERS3Q8IU89 383 aa15.08■□□□□ 0
SSSCA1-203ENST00000526877 MIGA1Q8NAN2 632 aa15.08■□□□□ 0
SSSCA1-203ENST00000526877 ARMT1Q9H993 441 aa15.08■□□□□ 0
SSSCA1-203ENST00000526877 CTNNA3Q9UI47 895 aa15.08■□□□□ 0
SSSCA1-203ENST00000526877 AFG3L2Q9Y4W6 797 aa15.08■□□□□ 0
SSSCA1-203ENST00000526877 ZHX2Q9Y6X8 837 aa15.08■□□□□ 0
SSSCA1-203ENST00000526877 SIPA1L1O43166 1804 aa15.08■□□□□ 0
SSSCA1-203ENST00000526877 DOCK1Q14185 1865 aa15.08■□□□□ 0
SSSCA1-203ENST00000526877 PTPRFP10586 1907 aa15.07■□□□□ 0
SSSCA1-203ENST00000526877 FAM196BA6NMK8 535 aa15.07■□□□□ 0
SSSCA1-203ENST00000526877 PATL2C9JE40 543 aaKnown RBP15.07■□□□□ 0
SSSCA1-203ENST00000526877 APPP05067 770 aa15.07■□□□□ 0
SSSCA1-203ENST00000526877 PLCG2P16885 1265 aa15.07■□□□□ 0
SSSCA1-203ENST00000526877 ZKSCAN1P17029 563 aaPredicted RBP15.07■□□□□ 0
SSSCA1-203ENST00000526877 DYNLL1P63167 89 aaKnown RBP15.07■□□□□ 0
SSSCA1-203ENST00000526877 RRP1BQ14684 758 aaKnown RBP15.07■□□□□ 0
SSSCA1-203ENST00000526877 NECTIN1Q15223 517 aa15.07■□□□□ 0
SSSCA1-203ENST00000526877 VPS53Q5VIR6 699 aa15.07■□□□□ 0
SSSCA1-203ENST00000526877 PTPN22Q9Y2R2 807 aa15.07■□□□□ 0
SSSCA1-203ENST00000526877 PDHXO00330 501 aa15.06■□□□□ 0
SSSCA1-203ENST00000526877 CREB3L3Q68CJ9 461 aa15.06■□□□□ 0
SSSCA1-203ENST00000526877 C17orf99Q6UX52 265 aa15.06■□□□□ 0
SSSCA1-203ENST00000526877 METTL16Q86W50 562 aaKnown RBP15.06■□□□□ 0
SSSCA1-203ENST00000526877 LCORLQ8N3X6 602 aa15.06■□□□□ 0
SSSCA1-203ENST00000526877 TGFBRAP1Q8WUH2 860 aa15.06■□□□□ 0
SSSCA1-203ENST00000526877 RIOK1Q9BRS2 568 aaKnown RBP15.06■□□□□ 0
SSSCA1-203ENST00000526877 CRNKL1Q9BZJ0 848 aaKnown RBP15.06■□□□□ 0
SSSCA1-203ENST00000526877 NACAP1Q9BZK3 213 aa15.06■□□□□ 0
SSSCA1-203ENST00000526877 DHX36Q9H2U1 1008 aaKnown RBP15.06■□□□□ 0
SSSCA1-203ENST00000526877 EFCC1Q9HA90 598 aa15.06■□□□□ 0
SSSCA1-203ENST00000526877 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.06■□□□□ 0
SSSCA1-203ENST00000526877 PICK1Q9NRD5 415 aa15.06■□□□□ 0
SSSCA1-203ENST00000526877 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.06■□□□□ 0
SSSCA1-203ENST00000526877 SLC4A4Q9Y6R1 1079 aa15.06■□□□□ 0
SSSCA1-203ENST00000526877 ADGRA2Q96PE1 1338 aa15.06■□□□□ 0
SSSCA1-203ENST00000526877 A0A0G2JLL6 359 aaPredicted RBP15.05■□□□□ -0
SSSCA1-203ENST00000526877 SLC27A2O14975 620 aa15.05■□□□□ -0
SSSCA1-203ENST00000526877 SOX10P56693 466 aa15.05■□□□□ -0
SSSCA1-203ENST00000526877 MLLT1Q03111 559 aaPredicted RBP15.05■□□□□ -0
SSSCA1-203ENST00000526877 PRRT2Q7Z6L0 340 aaPredicted RBP15.05■□□□□ -0
SSSCA1-203ENST00000526877 CCDC84Q86UT8 332 aaPredicted RBP15.05■□□□□ -0
SSSCA1-203ENST00000526877 MAPKAPK5Q8IW41 473 aa15.05■□□□□ -0
SSSCA1-203ENST00000526877 PI4KBQ9UBF8 816 aa15.05■□□□□ -0
SSSCA1-203ENST00000526877 HTTP42858 3142 aa15.04■□□□□ -0
SSSCA1-203ENST00000526877 ZSWIM8A7E2V4 1837 aa15.04■□□□□ -0
SSSCA1-203ENST00000526877 ATAD5Q96QE3 1844 aa15.04■□□□□ -0
SSSCA1-203ENST00000526877 FLT1P17948 1338 aa15.04■□□□□ -0
SSSCA1-203ENST00000526877 CAP2P40123 477 aa15.04■□□□□ -0
SSSCA1-203ENST00000526877 RABEP1Q15276 862 aa15.04■□□□□ -0
SSSCA1-203ENST00000526877 ALX1Q15699 326 aa15.04■□□□□ -0
SSSCA1-203ENST00000526877 IMMTQ16891 758 aaKnown RBP15.04■□□□□ -0
SSSCA1-203ENST00000526877 FOXP4Q8IVH2 680 aaPredicted RBP15.04■□□□□ -0
SSSCA1-203ENST00000526877 KCNB2Q92953 911 aa15.04■□□□□ -0
SSSCA1-203ENST00000526877 DDRGK1Q96HY6 314 aa15.04■□□□□ -0
SSSCA1-203ENST00000526877 ARHGAP39Q9C0H5 1083 aa15.04■□□□□ -0
SSSCA1-203ENST00000526877 DNAJC18Q9H819 358 aa15.04■□□□□ -0
SSSCA1-203ENST00000526877 HERC5Q9UII4 1024 aaKnown RBP15.04■□□□□ -0
SSSCA1-203ENST00000526877 SNX14Q9Y5W7 946 aa15.04■□□□□ -0
SSSCA1-203ENST00000526877 KIAA0100Q14667 2235 aaKnown RBP15.03■□□□□ -0
SSSCA1-203ENST00000526877 ZMYM6O95789 1325 aa15.03■□□□□ -0
SSSCA1-203ENST00000526877 GSG1L2A8MUP6 293 aa15.03■□□□□ -0
SSSCA1-203ENST00000526877 FGAP02671 866 aa15.03■□□□□ -0
SSSCA1-203ENST00000526877 CTGFP29279 349 aa15.03■□□□□ -0
SSSCA1-203ENST00000526877 JAG1P78504 1218 aa15.03■□□□□ -0
SSSCA1-203ENST00000526877 LACTBP83111 547 aaPredicted RBP15.03■□□□□ -0
SSSCA1-203ENST00000526877 KRT32Q14532 448 aa15.03■□□□□ -0
SSSCA1-203ENST00000526877 FASTKD5Q7L8L6 764 aaKnown RBP15.03■□□□□ -0
SSSCA1-203ENST00000526877 IFNL3Q8IZI9 196 aa15.03■□□□□ -0
SSSCA1-203ENST00000526877 IL27Q8NEV9 243 aa15.03■□□□□ -0
SSSCA1-203ENST00000526877 IL17RAQ96F46 866 aa15.03■□□□□ -0
SSSCA1-203ENST00000526877 NAPBQ9H115 298 aa15.03■□□□□ -0
SSSCA1-203ENST00000526877 CPA4Q9UI42 421 aa15.03■□□□□ -0
SSSCA1-203ENST00000526877 PALD1Q9ULE6 856 aa15.03■□□□□ -0
SSSCA1-203ENST00000526877 MYH1P12882 1939 aa15.03■□□□□ -0
SSSCA1-203ENST00000526877 ZNF213O14771 459 aa15.02■□□□□ -0
SSSCA1-203ENST00000526877 FOXP2O15409 715 aa15.02■□□□□ -0
SSSCA1-203ENST00000526877 PRKAB2O43741 272 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms