RNA–Protein interactions for RNA: ENST00000526433.1

SSSCA1-202, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-202ENST00000526433 APPP05067 770 aa19.45■□□□□ 0.7
SSSCA1-202ENST00000526433 CENPBP07199 599 aaPredicted RBP19.45■□□□□ 0.7
SSSCA1-202ENST00000526433 SHMT1P34896 483 aa19.45■□□□□ 0.7
SSSCA1-202ENST00000526433 SPP2Q13103 211 aa19.45■□□□□ 0.7
SSSCA1-202ENST00000526433 SHROOM1Q2M3G4 852 aaPredicted RBP19.45■□□□□ 0.7
SSSCA1-202ENST00000526433 CERKLQ49MI3 558 aaPredicted RBP19.45■□□□□ 0.7
SSSCA1-202ENST00000526433 GIMAP6Q6P9H5 292 aa19.45■□□□□ 0.7
SSSCA1-202ENST00000526433 CTR9Q6PD62 1173 aa19.45■□□□□ 0.7
SSSCA1-202ENST00000526433 AMOTL1Q8IY63 956 aa19.45■□□□□ 0.7
SSSCA1-202ENST00000526433 DYNLL2Q96FJ2 89 aa19.45■□□□□ 0.7
SSSCA1-202ENST00000526433 DDX60LQ5H9U9 1706 aaKnown RBP19.45■□□□□ 0.7
SSSCA1-202ENST00000526433 TRIM75PA6NK02 468 aa19.44■□□□□ 0.7
SSSCA1-202ENST00000526433 SMIM22K7EJ46 135 aa19.44■□□□□ 0.7
SSSCA1-202ENST00000526433 MOGSQ13724 837 aa19.44■□□□□ 0.7
SSSCA1-202ENST00000526433 ZNF280CQ8ND82 737 aa19.44■□□□□ 0.7
SSSCA1-202ENST00000526433 TBC1D2Q9BYX2 928 aa19.44■□□□□ 0.7
SSSCA1-202ENST00000526433 HELLSQ9NRZ9 838 aa19.44■□□□□ 0.7
SSSCA1-202ENST00000526433 A0A0G2JLL6 359 aaPredicted RBP19.43■□□□□ 0.7
SSSCA1-202ENST00000526433 GPR25O00155 361 aa19.43■□□□□ 0.7
SSSCA1-202ENST00000526433 GH2P01242 217 aa19.43■□□□□ 0.7
SSSCA1-202ENST00000526433 NEFLP07196 543 aa19.43■□□□□ 0.7
SSSCA1-202ENST00000526433 CRHR2Q13324 411 aa19.43■□□□□ 0.7
SSSCA1-202ENST00000526433 SBK1Q52WX2 424 aa19.43■□□□□ 0.7
SSSCA1-202ENST00000526433 CCDC129Q6ZRS4 1044 aa19.43■□□□□ 0.7
SSSCA1-202ENST00000526433 FASTKD5Q7L8L6 764 aaKnown RBP19.43■□□□□ 0.7
SSSCA1-202ENST00000526433 PRRT2Q7Z6L0 340 aaPredicted RBP19.43■□□□□ 0.7
SSSCA1-202ENST00000526433 WDR18Q9BV38 432 aa19.43■□□□□ 0.7
SSSCA1-202ENST00000526433 AS3MTQ9HBK9 375 aa19.43■□□□□ 0.7
SSSCA1-202ENST00000526433 ZCCHC17Q9NP64 241 aaKnown RBP19.43■□□□□ 0.7
SSSCA1-202ENST00000526433 SWAP70Q9UH65 585 aa19.43■□□□□ 0.7
SSSCA1-202ENST00000526433 ZBTB21Q9ULJ3 1066 aa19.43■□□□□ 0.7
SSSCA1-202ENST00000526433 SDSP20132 328 aa19.42■□□□□ 0.7
SSSCA1-202ENST00000526433 TAF1CQ15572 869 aaPredicted RBP19.42■□□□□ 0.7
SSSCA1-202ENST00000526433 ABCB5Q2M3G0 1257 aa19.42■□□□□ 0.7
SSSCA1-202ENST00000526433 NOM1Q5C9Z4 860 aaKnown RBP19.42■□□□□ 0.7
SSSCA1-202ENST00000526433 GPAT2Q6NUI2 795 aa19.42■□□□□ 0.7
SSSCA1-202ENST00000526433 GADL1Q6ZQY3 521 aa19.42■□□□□ 0.7
SSSCA1-202ENST00000526433 ANKRD23Q86SG2 305 aa19.42■□□□□ 0.7
SSSCA1-202ENST00000526433 IFNL3Q8IZI9 196 aa19.42■□□□□ 0.7
SSSCA1-202ENST00000526433 SLC44A5Q8NCS7 719 aa19.42■□□□□ 0.7
SSSCA1-202ENST00000526433 FAM227BQ96M60 508 aa19.42■□□□□ 0.7
SSSCA1-202ENST00000526433 ZFYVE28Q9HCC9 887 aa19.42■□□□□ 0.7
SSSCA1-202ENST00000526433 CABP5Q9NP86 173 aa19.42■□□□□ 0.7
SSSCA1-202ENST00000526433 TAOK2Q9UL54 1235 aa19.42■□□□□ 0.7
SSSCA1-202ENST00000526433 MINDY4BA8MYZ0 360 aa19.41■□□□□ 0.7
SSSCA1-202ENST00000526433 TDO2P48775 406 aa19.41■□□□□ 0.7
SSSCA1-202ENST00000526433 CDK8P49336 464 aa19.41■□□□□ 0.7
SSSCA1-202ENST00000526433 NMIQ13287 307 aaPredicted RBP19.41■□□□□ 0.7
SSSCA1-202ENST00000526433 MCMDC2Q4G0Z9 681 aa19.41■□□□□ 0.7
SSSCA1-202ENST00000526433 TTC22Q5TAA0 569 aa19.41■□□□□ 0.7
SSSCA1-202ENST00000526433 CENPQQ7L2Z9 268 aaPredicted RBP19.41■□□□□ 0.7
SSSCA1-202ENST00000526433 ZNF296Q8WUU4 475 aaPredicted RBP19.41■□□□□ 0.7
SSSCA1-202ENST00000526433 NACAP1Q9BZK3 213 aa19.41■□□□□ 0.7
SSSCA1-202ENST00000526433 EPB41L4AQ9HCS5 686 aaPredicted RBP19.41■□□□□ 0.7
SSSCA1-202ENST00000526433 ARPP21Q9UBL0 812 aaPredicted RBP19.41■□□□□ 0.7
SSSCA1-202ENST00000526433 PTPRFP10586 1907 aa19.41■□□□□ 0.7
SSSCA1-202ENST00000526433 A0A0D9SFI3 127 aa19.4■□□□□ 0.7
SSSCA1-202ENST00000526433 PDHXO00330 501 aa19.4■□□□□ 0.7
SSSCA1-202ENST00000526433 C16orf86Q6ZW13 317 aa19.4■□□□□ 0.7
SSSCA1-202ENST00000526433 FKTNO75072 461 aa19.39■□□□□ 0.69
SSSCA1-202ENST00000526433 RAB3GAP1Q15042 981 aa19.39■□□□□ 0.69
SSSCA1-202ENST00000526433 CCDC136Q96JN2 1154 aa19.39■□□□□ 0.69
SSSCA1-202ENST00000526433 USP17L10C9JJH3 530 aa19.38■□□□□ 0.69
SSSCA1-202ENST00000526433 MPHOSPH10O00566 681 aaKnown RBP19.38■□□□□ 0.69
SSSCA1-202ENST00000526433 MYH8P13535 1937 aa19.38■□□□□ 0.69
SSSCA1-202ENST00000526433 GSPT1P15170 499 aaKnown RBP19.38■□□□□ 0.69
SSSCA1-202ENST00000526433 GUCY1A2P33402 732 aa19.38■□□□□ 0.69
SSSCA1-202ENST00000526433 HMGCS2P54868 508 aa19.38■□□□□ 0.69
SSSCA1-202ENST00000526433 BACE1P56817 501 aa19.38■□□□□ 0.69
SSSCA1-202ENST00000526433 SEPT2Q15019 361 aa19.38■□□□□ 0.69
SSSCA1-202ENST00000526433 SH3D19Q5HYK7 790 aa19.38■□□□□ 0.69
SSSCA1-202ENST00000526433 STK11IPQ8N1F8 1099 aa19.38■□□□□ 0.69
SSSCA1-202ENST00000526433 NAPBQ9H115 298 aa19.38■□□□□ 0.69
SSSCA1-202ENST00000526433 C19orf81C9J6K1 198 aa19.37■□□□□ 0.69
SSSCA1-202ENST00000526433 HIP1O00291 1037 aa19.37■□□□□ 0.69
SSSCA1-202ENST00000526433 FOXP2O15409 715 aa19.37■□□□□ 0.69
SSSCA1-202ENST00000526433 MTMR2Q13614 643 aa19.37■□□□□ 0.69
SSSCA1-202ENST00000526433 VPS53Q5VIR6 699 aa19.37■□□□□ 0.69
SSSCA1-202ENST00000526433 TNS4Q8IZW8 715 aa19.37■□□□□ 0.69
SSSCA1-202ENST00000526433 PROCA1Q8NCQ7 364 aaPredicted RBP19.37■□□□□ 0.69
SSSCA1-202ENST00000526433 CCDC17Q96LX7 622 aa19.37■□□□□ 0.69
SSSCA1-202ENST00000526433 DIAPH3Q9NSV4 1193 aa19.37■□□□□ 0.69
SSSCA1-202ENST00000526433 TLR2O60603 784 aa19.36■□□□□ 0.69
SSSCA1-202ENST00000526433 AKR1B1P15121 316 aa19.36■□□□□ 0.69
SSSCA1-202ENST00000526433 DGKZQ13574 1117 aa19.36■□□□□ 0.69
SSSCA1-202ENST00000526433 TREML2Q5T2D2 321 aa19.36■□□□□ 0.69
SSSCA1-202ENST00000526433 CWC27Q6UX04 472 aaKnown RBP19.36■□□□□ 0.69
SSSCA1-202ENST00000526433 ZNF589Q86UQ0 364 aaPredicted RBP19.36■□□□□ 0.69
SSSCA1-202ENST00000526433 MKNK2Q9HBH9 465 aa19.36■□□□□ 0.69
SSSCA1-202ENST00000526433 TMOD4Q9NZQ9 345 aa19.36■□□□□ 0.69
SSSCA1-202ENST00000526433 AGTPBP1Q9UPW5 1226 aa19.36■□□□□ 0.69
SSSCA1-202ENST00000526433 SLC45A1Q9Y2W3 748 aa19.36■□□□□ 0.69
SSSCA1-202ENST00000526433 CYP2C8P10632 490 aa19.35■□□□□ 0.69
SSSCA1-202ENST00000526433 SP3Q02447 781 aa19.35■□□□□ 0.69
SSSCA1-202ENST00000526433 ALX1Q15699 326 aa19.35■□□□□ 0.69
SSSCA1-202ENST00000526433 TMEM179Q6ZVK1 233 aa19.35■□□□□ 0.69
SSSCA1-202ENST00000526433 ACER1Q8TDN7 264 aa19.35■□□□□ 0.69
SSSCA1-202ENST00000526433 CCDC171Q6TFL3 1326 aa19.34■□□□□ 0.69
SSSCA1-202ENST00000526433 HSPD1P10809 573 aaKnown RBP19.34■□□□□ 0.69
SSSCA1-202ENST00000526433 MFAP1P55081 439 aaKnown RBP19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms