RNA–Protein interactions for RNA: ENST00000526313.5

USH1C-204, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best)

Gene USH1C, Length 2,149 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-204ENST00000526313 BAG3O95817 575 aa18.43■□□□□ 0.54
USH1C-204ENST00000526313 NOSTRINQ8IVI9 506 aa18.43■□□□□ 0.54
USH1C-204ENST00000526313 FAM163AQ96GL9 167 aaPredicted RBP18.43■□□□□ 0.54
USH1C-204ENST00000526313 MROH7-TTC4A0A0A0MT08 1334 aa18.43■□□□□ 0.54
USH1C-204ENST00000526313 WDHD1O75717 1129 aaPredicted RBP18.43■□□□□ 0.54
USH1C-204ENST00000526313 USP17L8P0C7I0 530 aa18.43■□□□□ 0.54
USH1C-204ENST00000526313 NDUFA8P51970 172 aa18.43■□□□□ 0.54
USH1C-204ENST00000526313 AEBP2Q6ZN18 517 aaPredicted RBP18.43■□□□□ 0.54
USH1C-204ENST00000526313 SH3RF3Q8TEJ3 882 aaPredicted RBP18.43■□□□□ 0.54
USH1C-204ENST00000526313 RTFDC1Q9BY42 306 aaPredicted RBP18.43■□□□□ 0.54
USH1C-204ENST00000526313 CBX8Q9HC52 389 aa18.43■□□□□ 0.54
USH1C-204ENST00000526313 MCM9Q9NXL9 1143 aa18.43■□□□□ 0.54
USH1C-204ENST00000526313 A0A1B0GVL5 298 aa18.42■□□□□ 0.54
USH1C-204ENST00000526313 DIXDC1Q155Q3 683 aa18.42■□□□□ 0.54
USH1C-204ENST00000526313 PKN1Q16512 942 aa18.42■□□□□ 0.54
USH1C-204ENST00000526313 ZNF772Q68DY9 489 aaPredicted RBP18.42■□□□□ 0.54
USH1C-204ENST00000526313 COL23A1Q86Y22 540 aaPredicted RBP18.42■□□□□ 0.54
USH1C-204ENST00000526313 CMTR1Q8N1G2 835 aaKnown RBP18.42■□□□□ 0.54
USH1C-204ENST00000526313 ANKS1AQ92625 1134 aa18.42■□□□□ 0.54
USH1C-204ENST00000526313 FAM205AQ6ZU69 1335 aa18.42■□□□□ 0.54
USH1C-204ENST00000526313 GPR75-ASB3A0A0A6YYF3 556 aa18.41■□□□□ 0.54
USH1C-204ENST00000526313 BTBD18B2RXH4 712 aa18.41■□□□□ 0.54
USH1C-204ENST00000526313 SAFBQ15424 915 aaKnown RBP eCLIP18.41■□□□□ 0.54
USH1C-204ENST00000526313 DIS3L2Q8IYB7 885 aaKnown RBP18.41■□□□□ 0.54
USH1C-204ENST00000526313 ZKSCAN5Q9Y2L8 839 aa18.41■□□□□ 0.54
USH1C-204ENST00000526313 RCSD1Q6JBY9 416 aa18.41■□□□□ 0.54
USH1C-204ENST00000526313 JMYQ8N9B5 988 aa18.41■□□□□ 0.54
USH1C-204ENST00000526313 ATP6V0A2Q9Y487 856 aa18.41■□□□□ 0.54
USH1C-204ENST00000526313 MYH6P13533 1939 aa18.4■□□□□ 0.54
USH1C-204ENST00000526313 TOB1P50616 345 aaPredicted RBP18.4■□□□□ 0.54
USH1C-204ENST00000526313 GNL2Q13823 731 aaKnown RBP18.4■□□□□ 0.54
USH1C-204ENST00000526313 TMTC3Q6ZXV5 915 aa18.4■□□□□ 0.54
USH1C-204ENST00000526313 SHISA4Q96DD7 197 aa18.4■□□□□ 0.54
USH1C-204ENST00000526313 KCNJ14Q9UNX9 436 aa18.4■□□□□ 0.54
USH1C-204ENST00000526313 HPSEQ9Y251 543 aa18.4■□□□□ 0.54
USH1C-204ENST00000526313 SRGNP10124 158 aa18.4■□□□□ 0.54
USH1C-204ENST00000526313 USP5P45974 858 aa18.4■□□□□ 0.54
USH1C-204ENST00000526313 FAM47AQ5JRC9 791 aa18.4■□□□□ 0.54
USH1C-204ENST00000526313 LUZP1Q86V48 1076 aa18.4■□□□□ 0.54
USH1C-204ENST00000526313 CCDC82Q8N4S0 544 aa18.4■□□□□ 0.54
USH1C-204ENST00000526313 FLAD1Q8NFF5 587 aa18.4■□□□□ 0.54
USH1C-204ENST00000526313 TBC1D22AQ8WUA7 517 aa18.4■□□□□ 0.54
USH1C-204ENST00000526313 TIGD1Q96MW7 591 aa18.4■□□□□ 0.54
USH1C-204ENST00000526313 PPEF1O14829 653 aaPredicted RBP18.39■□□□□ 0.53
USH1C-204ENST00000526313 NMT2O60551 498 aa18.39■□□□□ 0.53
USH1C-204ENST00000526313 PLEKHA8P1O95397 391 aa18.39■□□□□ 0.53
USH1C-204ENST00000526313 ZNF165P49910 485 aa18.39■□□□□ 0.53
USH1C-204ENST00000526313 STX1AQ16623 288 aa18.39■□□□□ 0.53
USH1C-204ENST00000526313 DGKHQ86XP1 1220 aa18.39■□□□□ 0.53
USH1C-204ENST00000526313 NOL10Q9BSC4 688 aaKnown RBP18.39■□□□□ 0.53
USH1C-204ENST00000526313 DNAJC25Q9H1X3 360 aa18.39■□□□□ 0.53
USH1C-204ENST00000526313 TCP11L1Q9NUJ3 509 aa18.39■□□□□ 0.53
USH1C-204ENST00000526313 MORC2Q9Y6X9 1032 aaPredicted RBP18.39■□□□□ 0.53
USH1C-204ENST00000526313 GAKO14976 1311 aa18.39■□□□□ 0.53
USH1C-204ENST00000526313 CDK5RAP2Q96SN8 1893 aa18.39■□□□□ 0.53
USH1C-204ENST00000526313 MARCKSP29966 332 aaPredicted RBP18.38■□□□□ 0.53
USH1C-204ENST00000526313 IQCB1Q15051 598 aa18.38■□□□□ 0.53
USH1C-204ENST00000526313 RILPL1Q5EBL4 403 aa18.38■□□□□ 0.53
USH1C-204ENST00000526313 NAV1Q8NEY1 1877 aa18.38■□□□□ 0.53
USH1C-204ENST00000526313 ZNF500O60304 480 aaPredicted RBP18.38■□□□□ 0.53
USH1C-204ENST00000526313 ZNF202O95125 648 aa18.38■□□□□ 0.53
USH1C-204ENST00000526313 APBA3O96018 575 aa18.38■□□□□ 0.53
USH1C-204ENST00000526313 NPR1P16066 1061 aa18.38■□□□□ 0.53
USH1C-204ENST00000526313 PFKFB1P16118 471 aa18.38■□□□□ 0.53
USH1C-204ENST00000526313 PHF20Q9BVI0 1012 aa18.38■□□□□ 0.53
USH1C-204ENST00000526313 IL17RBQ9NRM6 502 aa18.38■□□□□ 0.53
USH1C-204ENST00000526313 TSPY2A6NKD2 308 aa18.37■□□□□ 0.53
USH1C-204ENST00000526313 CUTAO60888 179 aa18.37■□□□□ 0.53
USH1C-204ENST00000526313 MSNP26038 577 aaKnown RBP18.37■□□□□ 0.53
USH1C-204ENST00000526313 BTDP43251 543 aa18.37■□□□□ 0.53
USH1C-204ENST00000526313 AKAP17AQ02040 695 aaKnown RBP18.37■□□□□ 0.53
USH1C-204ENST00000526313 CCDC178Q5BJE1 867 aa18.37■□□□□ 0.53
USH1C-204ENST00000526313 RESP18Q5W5W9 173 aa18.37■□□□□ 0.53
USH1C-204ENST00000526313 SHC4Q6S5L8 630 aa18.37■□□□□ 0.53
USH1C-204ENST00000526313 TGFBRAP1Q8WUH2 860 aa18.37■□□□□ 0.53
USH1C-204ENST00000526313 V9GY48 417 aaPredicted RBP18.37■□□□□ 0.53
USH1C-204ENST00000526313 DDX60LQ5H9U9 1706 aaKnown RBP18.37■□□□□ 0.53
USH1C-204ENST00000526313 PLCG2P16885 1265 aa18.37■□□□□ 0.53
USH1C-204ENST00000526313 RHBDL3P58872 404 aa18.37■□□□□ 0.53
USH1C-204ENST00000526313 TFAP4Q01664 338 aa18.37■□□□□ 0.53
USH1C-204ENST00000526313 MFSD14BQ5SR56 506 aa18.37■□□□□ 0.53
USH1C-204ENST00000526313 SLF2Q8IX21 1173 aa18.37■□□□□ 0.53
USH1C-204ENST00000526313 SRBD1Q8N5C6 995 aaKnown RBP18.37■□□□□ 0.53
USH1C-204ENST00000526313 SDF4Q9BRK5 362 aa18.37■□□□□ 0.53
USH1C-204ENST00000526313 COA1Q9GZY4 146 aa18.37■□□□□ 0.53
USH1C-204ENST00000526313 ANO10Q9NW15 660 aa18.37■□□□□ 0.53
USH1C-204ENST00000526313 KIAA1468Q9P260 1216 aa18.37■□□□□ 0.53
USH1C-204ENST00000526313 CNTNAP5Q8WYK1 1306 aa18.37■□□□□ 0.53
USH1C-204ENST00000526313 C6orf229H3BNL8 230 aa18.36■□□□□ 0.53
USH1C-204ENST00000526313 XBP1P17861 261 aa18.36■□□□□ 0.53
USH1C-204ENST00000526313 OXER1Q8TDS5 423 aa18.36■□□□□ 0.53
USH1C-204ENST00000526313 DYNLL2Q96FJ2 89 aa18.36■□□□□ 0.53
USH1C-204ENST00000526313 SUGT1Q9Y2Z0 365 aa18.36■□□□□ 0.53
USH1C-204ENST00000526313 PLCD1P51178 756 aa18.35■□□□□ 0.53
USH1C-204ENST00000526313 NR5A1Q13285 461 aa18.35■□□□□ 0.53
USH1C-204ENST00000526313 C11orf57Q6ZUT1 292 aaPredicted RBP18.35■□□□□ 0.53
USH1C-204ENST00000526313 AMOTL1Q8IY63 956 aa18.35■□□□□ 0.53
USH1C-204ENST00000526313 CTCFLQ8NI51 663 aaPredicted RBP18.35■□□□□ 0.53
USH1C-204ENST00000526313 ALDH1B1P30837 517 aa18.35■□□□□ 0.53
USH1C-204ENST00000526313 PDE6BP35913 854 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms