RNA–Protein interactions for RNA: ENST00000525990.1

SSBP3-210, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-210ENST00000525990 PLCD1P51178 756 aa14.65□□□□□ -0.06
SSBP3-210ENST00000525990 FOXP4Q8IVH2 680 aaPredicted RBP14.65□□□□□ -0.06
SSBP3-210ENST00000525990 LCORLQ8N3X6 602 aa14.65□□□□□ -0.06
SSBP3-210ENST00000525990 TRIM34Q9BYJ4 488 aa14.65□□□□□ -0.06
SSBP3-210ENST00000525990 ASCC2Q9H1I8 757 aaPredicted RBP14.65□□□□□ -0.06
SSBP3-210ENST00000525990 MAGEB6P1A0A0J9YX57 407 aa14.64□□□□□ -0.07
SSBP3-210ENST00000525990 SMIM22K7EJ46 135 aa14.64□□□□□ -0.07
SSBP3-210ENST00000525990 GNRH1P01148 92 aa14.64□□□□□ -0.07
SSBP3-210ENST00000525990 GH2P01242 217 aa14.64□□□□□ -0.07
SSBP3-210ENST00000525990 HLA-DOAP06340 250 aa14.64□□□□□ -0.07
SSBP3-210ENST00000525990 FCGRTP55899 365 aa14.64□□□□□ -0.07
SSBP3-210ENST00000525990 SH3D19Q5HYK7 790 aa14.64□□□□□ -0.07
SSBP3-210ENST00000525990 NBPF11Q86T75 865 aa14.64□□□□□ -0.07
SSBP3-210ENST00000525990 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.64□□□□□ -0.07
SSBP3-210ENST00000525990 SDR42E1Q8WUS8 393 aa14.64□□□□□ -0.07
SSBP3-210ENST00000525990 IGSF3O75054 1194 aa14.63□□□□□ -0.07
SSBP3-210ENST00000525990 ASNSP08243 561 aa14.63□□□□□ -0.07
SSBP3-210ENST00000525990 CYP2D6P10635 497 aa14.63□□□□□ -0.07
SSBP3-210ENST00000525990 GRK4P32298 578 aa14.63□□□□□ -0.07
SSBP3-210ENST00000525990 BACE1P56817 501 aa14.63□□□□□ -0.07
SSBP3-210ENST00000525990 TTF1Q15361 905 aaPredicted RBP14.63□□□□□ -0.07
SSBP3-210ENST00000525990 ZYXQ15942 572 aaKnown RBP14.63□□□□□ -0.07
SSBP3-210ENST00000525990 TSHZ3Q63HK5 1081 aa14.63□□□□□ -0.07
SSBP3-210ENST00000525990 RAET1EQ8TD07 263 aa14.63□□□□□ -0.07
SSBP3-210ENST00000525990 WDR18Q9BV38 432 aa14.63□□□□□ -0.07
SSBP3-210ENST00000525990 TMEM106CQ9BVX2 250 aa14.63□□□□□ -0.07
SSBP3-210ENST00000525990 ARMT1Q9H993 441 aa14.63□□□□□ -0.07
SSBP3-210ENST00000525990 AS3MTQ9HBK9 375 aa14.63□□□□□ -0.07
SSBP3-210ENST00000525990 PAG1Q9NWQ8 432 aa14.63□□□□□ -0.07
SSBP3-210ENST00000525990 PARP14Q460N5 1801 aa14.63□□□□□ -0.07
SSBP3-210ENST00000525990 PRKAB2O43741 272 aa14.62□□□□□ -0.07
SSBP3-210ENST00000525990 ELNP15502 786 aa14.62□□□□□ -0.07
SSBP3-210ENST00000525990 ATP5JP18859 108 aa14.62□□□□□ -0.07
SSBP3-210ENST00000525990 SHMT1P34896 483 aa14.62□□□□□ -0.07
SSBP3-210ENST00000525990 FLT3LGP49771 235 aa14.62□□□□□ -0.07
SSBP3-210ENST00000525990 PRMT2P55345 433 aa14.62□□□□□ -0.07
SSBP3-210ENST00000525990 TATDN1Q6P1N9 297 aa14.62□□□□□ -0.07
SSBP3-210ENST00000525990 POTEEQ6S8J3 1075 aa14.62□□□□□ -0.07
SSBP3-210ENST00000525990 SHISA4Q96DD7 197 aa14.62□□□□□ -0.07
SSBP3-210ENST00000525990 LRRCC1Q9C099 1032 aa14.62□□□□□ -0.07
SSBP3-210ENST00000525990 EMILIN3Q9NT22 766 aa14.62□□□□□ -0.07
SSBP3-210ENST00000525990 SERPINB13Q9UIV8 391 aa14.62□□□□□ -0.07
SSBP3-210ENST00000525990 RLFQ13129 1914 aa14.62□□□□□ -0.07
SSBP3-210ENST00000525990 TNPO2O14787 897 aaKnown RBP14.61□□□□□ -0.07
SSBP3-210ENST00000525990 ADD2P35612 726 aa14.61□□□□□ -0.07
SSBP3-210ENST00000525990 SLC44A5Q8NCS7 719 aa14.61□□□□□ -0.07
SSBP3-210ENST00000525990 P2RX7Q99572 595 aaKnown RBP14.61□□□□□ -0.07
SSBP3-210ENST00000525990 HAUS7Q99871 368 aa14.61□□□□□ -0.07
SSBP3-210ENST00000525990 TBC1D2Q9BYX2 928 aa14.61□□□□□ -0.07
SSBP3-210ENST00000525990 EHD4Q9H223 541 aa14.61□□□□□ -0.07
SSBP3-210ENST00000525990 CHMP4BQ9H444 224 aaKnown RBP14.61□□□□□ -0.07
SSBP3-210ENST00000525990 TXNRD2Q9NNW7 524 aa14.61□□□□□ -0.07
SSBP3-210ENST00000525990 PNMA3Q9UL41 463 aa14.61□□□□□ -0.07
SSBP3-210ENST00000525990 ALPK3Q96L96 1907 aa14.6□□□□□ -0.07
SSBP3-210ENST00000525990 CYP2D7A0A087X1C5 515 aa14.6□□□□□ -0.07
SSBP3-210ENST00000525990 USP17L10C9JJH3 530 aa14.6□□□□□ -0.07
SSBP3-210ENST00000525990 MBD4O95243 580 aa14.6□□□□□ -0.07
SSBP3-210ENST00000525990 POLR3DP05423 398 aaPredicted RBP14.6□□□□□ -0.07
SSBP3-210ENST00000525990 CCL5P13501 91 aa14.6□□□□□ -0.07
SSBP3-210ENST00000525990 HOXD10P28358 340 aa14.6□□□□□ -0.07
SSBP3-210ENST00000525990 GUCY1A2P33402 732 aa14.6□□□□□ -0.07
SSBP3-210ENST00000525990 GABPAQ06546 454 aa14.6□□□□□ -0.07
SSBP3-210ENST00000525990 RAB3GAP1Q15042 981 aa14.6□□□□□ -0.07
SSBP3-210ENST00000525990 FAM110CQ1W6H9 321 aa14.6□□□□□ -0.07
SSBP3-210ENST00000525990 PRPF38BQ5VTL8 546 aaKnown RBP14.6□□□□□ -0.07
SSBP3-210ENST00000525990 CERS3Q8IU89 383 aa14.6□□□□□ -0.07
SSBP3-210ENST00000525990 ACER1Q8TDN7 264 aa14.6□□□□□ -0.07
SSBP3-210ENST00000525990 CRNKL1Q9BZJ0 848 aaKnown RBP14.6□□□□□ -0.07
SSBP3-210ENST00000525990 DCP1AQ9NPI6 582 aaPredicted RBP14.6□□□□□ -0.07
SSBP3-210ENST00000525990 MCM9Q9NXL9 1143 aa14.6□□□□□ -0.07
SSBP3-210ENST00000525990 TAOK2Q9UL54 1235 aa14.6□□□□□ -0.07
SSBP3-210ENST00000525990 PCDHB15Q9Y5E8 787 aa14.6□□□□□ -0.07
SSBP3-210ENST00000525990 COL11A1P12107 1806 aaPredicted RBP14.59□□□□□ -0.07
SSBP3-210ENST00000525990 A0A0G2JMZ2 1700 aa14.59□□□□□ -0.07
SSBP3-210ENST00000525990 ADCY3O60266 1144 aa14.59□□□□□ -0.07
SSBP3-210ENST00000525990 IRX3P78415 501 aaPredicted RBP14.59□□□□□ -0.07
SSBP3-210ENST00000525990 CERKLQ49MI3 558 aaPredicted RBP14.59□□□□□ -0.07
SSBP3-210ENST00000525990 TTC6Q86TZ1 520 aa14.59□□□□□ -0.07
SSBP3-210ENST00000525990 CLEC10AQ8IUN9 316 aa14.59□□□□□ -0.07
SSBP3-210ENST00000525990 DYNLL2Q96FJ2 89 aa14.59□□□□□ -0.07
SSBP3-210ENST00000525990 YTHDC1Q96MU7 727 aaKnown RBP14.59□□□□□ -0.07
SSBP3-210ENST00000525990 UNC93B1Q9H1C4 597 aa14.59□□□□□ -0.07
SSBP3-210ENST00000525990 TMOD4Q9NZQ9 345 aa14.59□□□□□ -0.07
SSBP3-210ENST00000525990 BIN2Q9UBW5 565 aaPredicted RBP14.59□□□□□ -0.07
SSBP3-210ENST00000525990 GREB1LQ9C091 1923 aaPredicted RBP14.58□□□□□ -0.07
SSBP3-210ENST00000525990 FRMPD3Q5JV73 1810 aa14.58□□□□□ -0.08
SSBP3-210ENST00000525990 HOXA7P31268 230 aaPredicted RBP14.58□□□□□ -0.08
SSBP3-210ENST00000525990 GCLCP48506 637 aaPredicted RBP14.58□□□□□ -0.08
SSBP3-210ENST00000525990 HERVK_113P62684 666 aa14.58□□□□□ -0.08
SSBP3-210ENST00000525990 PABPC4Q13310 644 aaKnown RBP eCLIP14.58□□□□□ -0.08
SSBP3-210ENST00000525990 SEPT2Q15019 361 aa14.58□□□□□ -0.08
SSBP3-210ENST00000525990 ABCB5Q2M3G0 1257 aa14.58□□□□□ -0.08
SSBP3-210ENST00000525990 OTUD7AQ8TE49 926 aaPredicted RBP14.58□□□□□ -0.08
SSBP3-210ENST00000525990 DCTPP1Q9H773 170 aa14.58□□□□□ -0.08
SSBP3-210ENST00000525990 C19orf81C9J6K1 198 aa14.57□□□□□ -0.08
SSBP3-210ENST00000525990 INHAP05111 366 aa14.57□□□□□ -0.08
SSBP3-210ENST00000525990 RRP1P56182 461 aaKnown RBP14.57□□□□□ -0.08
SSBP3-210ENST00000525990 TRIM32Q13049 653 aa14.57□□□□□ -0.08
SSBP3-210ENST00000525990 Q3C1V9 767 aa14.57□□□□□ -0.08
SSBP3-210ENST00000525990 TMED8Q6PL24 325 aaPredicted RBP14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms