RNA–Protein interactions for RNA: ENST00000525854.5

HIF3A-209, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 5

Gene HIF3A, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-209ENST00000525854 ZNF532Q9HCE3 1301 aa14.08□□□□□ -0.16
HIF3A-209ENST00000525854 HTTP42858 3142 aa14.07□□□□□ -0.16
HIF3A-209ENST00000525854 PHIPQ8WWQ0 1821 aa14.07□□□□□ -0.16
HIF3A-209ENST00000525854 TCRBV5S4A2TA0A5A2 114 aa14.07□□□□□ -0.16
HIF3A-209ENST00000525854 USP17L10C9JJH3 530 aa14.07□□□□□ -0.16
HIF3A-209ENST00000525854 TNPO2O14787 897 aaKnown RBP14.07□□□□□ -0.16
HIF3A-209ENST00000525854 POLR3DP05423 398 aaPredicted RBP14.07□□□□□ -0.16
HIF3A-209ENST00000525854 EN2P19622 333 aaPredicted RBP14.07□□□□□ -0.16
HIF3A-209ENST00000525854 GRK4P32298 578 aa14.07□□□□□ -0.16
HIF3A-209ENST00000525854 IRX3P78415 501 aaPredicted RBP14.07□□□□□ -0.16
HIF3A-209ENST00000525854 PRKCZQ05513 592 aa14.07□□□□□ -0.16
HIF3A-209ENST00000525854 TATDN1Q6P1N9 297 aa14.07□□□□□ -0.16
HIF3A-209ENST00000525854 ASCC2Q9H1I8 757 aaPredicted RBP14.07□□□□□ -0.16
HIF3A-209ENST00000525854 MYO5AQ9Y4I1 1855 aaKnown RBP14.07□□□□□ -0.16
HIF3A-209ENST00000525854 PTPRFP10586 1907 aa14.06□□□□□ -0.16
HIF3A-209ENST00000525854 GH2P01242 217 aa14.06□□□□□ -0.16
HIF3A-209ENST00000525854 HOXA7P31268 230 aaPredicted RBP14.06□□□□□ -0.16
HIF3A-209ENST00000525854 JAG1P78504 1218 aa14.06□□□□□ -0.16
HIF3A-209ENST00000525854 CERKLQ49MI3 558 aaPredicted RBP14.06□□□□□ -0.16
HIF3A-209ENST00000525854 PRPF38BQ5VTL8 546 aaKnown RBP14.06□□□□□ -0.16
HIF3A-209ENST00000525854 SLAIN1Q8ND83 568 aa14.06□□□□□ -0.16
HIF3A-209ENST00000525854 COA7Q96BR5 231 aa14.06□□□□□ -0.16
HIF3A-209ENST00000525854 GPATCH3Q96I76 525 aa14.06□□□□□ -0.16
HIF3A-209ENST00000525854 MCM9Q9NXL9 1143 aa14.06□□□□□ -0.16
HIF3A-209ENST00000525854 BIN2Q9UBW5 565 aaPredicted RBP14.06□□□□□ -0.16
HIF3A-209ENST00000525854 TAOK2Q9UL54 1235 aa14.06□□□□□ -0.16
HIF3A-209ENST00000525854 FOCADQ5VW36 1801 aa14.06□□□□□ -0.16
HIF3A-209ENST00000525854 MYCP01106 439 aaPredicted RBP14.05□□□□□ -0.16
HIF3A-209ENST00000525854 ADD2P35612 726 aa14.05□□□□□ -0.16
HIF3A-209ENST00000525854 FLT3LGP49771 235 aa14.05□□□□□ -0.16
HIF3A-209ENST00000525854 UBXN2AP68543 259 aa14.05□□□□□ -0.16
HIF3A-209ENST00000525854 ABCB5Q2M3G0 1257 aa14.05□□□□□ -0.16
HIF3A-209ENST00000525854 ZSCAN25Q6NSZ9 544 aa14.05□□□□□ -0.16
HIF3A-209ENST00000525854 USP17L2Q6R6M4 530 aa14.05□□□□□ -0.16
HIF3A-209ENST00000525854 EDC3Q96F86 508 aaKnown RBP14.05□□□□□ -0.16
HIF3A-209ENST00000525854 DCTPP1Q9H773 170 aa14.05□□□□□ -0.16
HIF3A-209ENST00000525854 CABP5Q9NP86 173 aa14.05□□□□□ -0.16
HIF3A-209ENST00000525854 ECHDC1Q9NTX5 307 aa14.05□□□□□ -0.16
HIF3A-209ENST00000525854 SIPA1L1O43166 1804 aa14.05□□□□□ -0.16
HIF3A-209ENST00000525854 CDK5RAP2Q96SN8 1893 aa14.04□□□□□ -0.16
HIF3A-209ENST00000525854 SMARCA5O60264 1052 aaPredicted RBP14.04□□□□□ -0.16
HIF3A-209ENST00000525854 PLCD1P51178 756 aa14.04□□□□□ -0.16
HIF3A-209ENST00000525854 USP14P54578 494 aa14.04□□□□□ -0.16
HIF3A-209ENST00000525854 IRF5Q13568 498 aa14.04□□□□□ -0.16
HIF3A-209ENST00000525854 RAB3GAP1Q15042 981 aa14.04□□□□□ -0.16
HIF3A-209ENST00000525854 UBE3CQ15386 1083 aa14.04□□□□□ -0.16
HIF3A-209ENST00000525854 SHROOM1Q2M3G4 852 aaPredicted RBP14.04□□□□□ -0.16
HIF3A-209ENST00000525854 LCORLQ8N3X6 602 aa14.04□□□□□ -0.16
HIF3A-209ENST00000525854 NKX2-3Q8TAU0 364 aa14.04□□□□□ -0.16
HIF3A-209ENST00000525854 PXYLP1Q8TE99 480 aa14.04□□□□□ -0.16
HIF3A-209ENST00000525854 GTF3C2Q8WUA4 911 aaPredicted RBP14.04□□□□□ -0.16
HIF3A-209ENST00000525854 DDRGK1Q96HY6 314 aa14.04□□□□□ -0.16
HIF3A-209ENST00000525854 FEZ1Q99689 392 aa14.04□□□□□ -0.16
HIF3A-209ENST00000525854 DCP1AQ9NPI6 582 aaPredicted RBP14.04□□□□□ -0.16
HIF3A-209ENST00000525854 GABRQQ9UN88 632 aa14.04□□□□□ -0.16
HIF3A-209ENST00000525854 LOC285556D6RIA3 1793 aa14.04□□□□□ -0.16
HIF3A-209ENST00000525854 ZSWIM8A7E2V4 1837 aa14.04□□□□□ -0.16
HIF3A-209ENST00000525854 ATAD5Q96QE3 1844 aa14.04□□□□□ -0.16
HIF3A-209ENST00000525854 ADCY3O60266 1144 aa14.03□□□□□ -0.16
HIF3A-209ENST00000525854 MBD4O95243 580 aa14.03□□□□□ -0.16
HIF3A-209ENST00000525854 SHMT1P34896 483 aa14.03□□□□□ -0.16
HIF3A-209ENST00000525854 AMOTL1Q8IY63 956 aa14.03□□□□□ -0.16
HIF3A-209ENST00000525854 SDR42E1Q8WUS8 393 aa14.03□□□□□ -0.16
HIF3A-209ENST00000525854 ARMT1Q9H993 441 aa14.03□□□□□ -0.16
HIF3A-209ENST00000525854 ATP8A2Q9NTI2 1148 aa14.03□□□□□ -0.16
HIF3A-209ENST00000525854 MORF4L1Q9UBU8 362 aa14.03□□□□□ -0.16
HIF3A-209ENST00000525854 RBBP6Q7Z6E9 1792 aaKnown RBP14.03□□□□□ -0.16
HIF3A-209ENST00000525854 GJB1P08034 283 aa14.02□□□□□ -0.17
HIF3A-209ENST00000525854 CCL5P13501 91 aa14.02□□□□□ -0.17
HIF3A-209ENST00000525854 HERVK_113P62684 666 aa14.02□□□□□ -0.17
HIF3A-209ENST00000525854 GABPAQ06546 454 aa14.02□□□□□ -0.17
HIF3A-209ENST00000525854 MTFR1Q15390 333 aa14.02□□□□□ -0.17
HIF3A-209ENST00000525854 GPRC5AQ8NFJ5 357 aa14.02□□□□□ -0.17
HIF3A-209ENST00000525854 C12orf42Q96LP6 360 aa14.02□□□□□ -0.17
HIF3A-209ENST00000525854 P2RX7Q99572 595 aaKnown RBP14.02□□□□□ -0.17
HIF3A-209ENST00000525854 KIAA1683Q9H0B3 1180 aa14.02□□□□□ -0.17
HIF3A-209ENST00000525854 EMILIN3Q9NT22 766 aa14.02□□□□□ -0.17
HIF3A-209ENST00000525854 SWAP70Q9UH65 585 aa14.02□□□□□ -0.17
HIF3A-209ENST00000525854 MYH1P12882 1939 aa14.02□□□□□ -0.17
HIF3A-209ENST00000525854 RRP1P56182 461 aaKnown RBP14.01□□□□□ -0.17
HIF3A-209ENST00000525854 RNF208Q9H0X6 261 aa14.01□□□□□ -0.17
HIF3A-209ENST00000525854 USP17L15C9J2P7 530 aa14□□□□□ -0.17
HIF3A-209ENST00000525854 USP17L13C9JLJ4 530 aa14□□□□□ -0.17
HIF3A-209ENST00000525854 USP17L11C9JVI0 530 aa14□□□□□ -0.17
HIF3A-209ENST00000525854 USP17L18D6R9N7 530 aa14□□□□□ -0.17
HIF3A-209ENST00000525854 USP17L22D6RA61 530 aa14□□□□□ -0.17
HIF3A-209ENST00000525854 USP17L17D6RBQ6 530 aa14□□□□□ -0.17
HIF3A-209ENST00000525854 USP17L19D6RCP7 530 aa14□□□□□ -0.17
HIF3A-209ENST00000525854 USP17L20D6RJB6 530 aa14□□□□□ -0.17
HIF3A-209ENST00000525854 MPHOSPH10O00566 681 aaKnown RBP14□□□□□ -0.17
HIF3A-209ENST00000525854 ELNP15502 786 aa14□□□□□ -0.17
HIF3A-209ENST00000525854 CAPN2P17655 700 aa14□□□□□ -0.17
HIF3A-209ENST00000525854 USP17L24Q0WX57 530 aa14□□□□□ -0.17
HIF3A-209ENST00000525854 ZYXQ15942 572 aaKnown RBP14□□□□□ -0.17
HIF3A-209ENST00000525854 CCAR1Q8IX12 1150 aaKnown RBP14□□□□□ -0.17
HIF3A-209ENST00000525854 TNRC18O15417 2968 aaPredicted RBP13.99□□□□□ -0.17
HIF3A-209ENST00000525854 PRKAB2O43741 272 aa13.99□□□□□ -0.17
HIF3A-209ENST00000525854 INHAP05111 366 aa13.99□□□□□ -0.17
HIF3A-209ENST00000525854 CYP2D6P10635 497 aa13.99□□□□□ -0.17
HIF3A-209ENST00000525854 MAPK4P31152 587 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms