RNA–Protein interactions for RNA: ENST00000525506.1

RBBP4-216, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 2

Gene RBBP4, Length 501 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-216ENST00000525506 MYH8P13535 1937 aa12.66□□□□□ -0.38
RBBP4-216ENST00000525506 DDX60LQ5H9U9 1706 aaKnown RBP12.66□□□□□ -0.38
RBBP4-216ENST00000525506 MAGEB6P1A0A0J9YX57 407 aa12.66□□□□□ -0.38
RBBP4-216ENST00000525506 CHGBP05060 677 aa12.66□□□□□ -0.38
RBBP4-216ENST00000525506 EVX2Q03828 476 aa12.66□□□□□ -0.38
RBBP4-216ENST00000525506 ANKRD13CQ8N6S4 541 aa12.66□□□□□ -0.38
RBBP4-216ENST00000525506 RIOK1Q9BRS2 568 aaKnown RBP12.66□□□□□ -0.38
RBBP4-216ENST00000525506 TRIM34Q9BYJ4 488 aa12.66□□□□□ -0.38
RBBP4-216ENST00000525506 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.66□□□□□ -0.38
RBBP4-216ENST00000525506 PAG1Q9NWQ8 432 aa12.66□□□□□ -0.38
RBBP4-216ENST00000525506 SRRDQ9UH36 339 aa12.66□□□□□ -0.38
RBBP4-216ENST00000525506 GABRQQ9UN88 632 aa12.66□□□□□ -0.38
RBBP4-216ENST00000525506 MYPNQ86TC9 1320 aa12.65□□□□□ -0.38
RBBP4-216ENST00000525506 ZNF532Q9HCE3 1301 aa12.65□□□□□ -0.38
RBBP4-216ENST00000525506 MKI67P46013 3256 aaKnown RBP12.65□□□□□ -0.38
RBBP4-216ENST00000525506 TCRBV5S4A2TA0A5A2 114 aa12.65□□□□□ -0.38
RBBP4-216ENST00000525506 HLA-DOAP06340 250 aa12.65□□□□□ -0.38
RBBP4-216ENST00000525506 MTMR2Q13614 643 aa12.65□□□□□ -0.38
RBBP4-216ENST00000525506 NBPF11Q86T75 865 aa12.65□□□□□ -0.38
RBBP4-216ENST00000525506 PROCA1Q8NCQ7 364 aaPredicted RBP12.65□□□□□ -0.38
RBBP4-216ENST00000525506 SMCR8Q8TEV9 937 aaPredicted RBP12.65□□□□□ -0.38
RBBP4-216ENST00000525506 RWDD1Q9H446 243 aaPredicted RBP12.65□□□□□ -0.38
RBBP4-216ENST00000525506 SLC45A1Q9Y2W3 748 aa12.65□□□□□ -0.38
RBBP4-216ENST00000525506 BRCA2P51587 3418 aa12.64□□□□□ -0.39
RBBP4-216ENST00000525506 ERC2O15083 957 aa12.64□□□□□ -0.39
RBBP4-216ENST00000525506 PEX10O60683 326 aa12.64□□□□□ -0.39
RBBP4-216ENST00000525506 GNRH1P01148 92 aa12.64□□□□□ -0.39
RBBP4-216ENST00000525506 GH2P01242 217 aa12.64□□□□□ -0.39
RBBP4-216ENST00000525506 ASNSP08243 561 aa12.64□□□□□ -0.39
RBBP4-216ENST00000525506 HOXD10P28358 340 aa12.64□□□□□ -0.39
RBBP4-216ENST00000525506 PLCD1P51178 756 aa12.64□□□□□ -0.39
RBBP4-216ENST00000525506 FCGRTP55899 365 aa12.64□□□□□ -0.39
RBBP4-216ENST00000525506 PRKCZQ05513 592 aa12.64□□□□□ -0.39
RBBP4-216ENST00000525506 MTFR1Q15390 333 aa12.64□□□□□ -0.39
RBBP4-216ENST00000525506 SH3D19Q5HYK7 790 aa12.64□□□□□ -0.39
RBBP4-216ENST00000525506 SMC5Q8IY18 1101 aa12.64□□□□□ -0.39
RBBP4-216ENST00000525506 LCORLQ8N3X6 602 aa12.64□□□□□ -0.39
RBBP4-216ENST00000525506 RAET1EQ8TD07 263 aa12.64□□□□□ -0.39
RBBP4-216ENST00000525506 WDR18Q9BV38 432 aa12.64□□□□□ -0.39
RBBP4-216ENST00000525506 TMEM106CQ9BVX2 250 aa12.64□□□□□ -0.39
RBBP4-216ENST00000525506 ASCC2Q9H1I8 757 aaPredicted RBP12.64□□□□□ -0.39
RBBP4-216ENST00000525506 AS3MTQ9HBK9 375 aa12.64□□□□□ -0.39
RBBP4-216ENST00000525506 ZBTB47Q9UFB7 747 aaPredicted RBP12.64□□□□□ -0.39
RBBP4-216ENST00000525506 TAOK2Q9UL54 1235 aa12.64□□□□□ -0.39
RBBP4-216ENST00000525506 ZBTB21Q9ULJ3 1066 aa12.64□□□□□ -0.39
RBBP4-216ENST00000525506 SALL3Q9BXA9 1300 aa12.63□□□□□ -0.39
RBBP4-216ENST00000525506 GLRX3O76003 335 aaKnown RBP12.63□□□□□ -0.39
RBBP4-216ENST00000525506 POLR3DP05423 398 aaPredicted RBP12.63□□□□□ -0.39
RBBP4-216ENST00000525506 CYP2D6P10635 497 aa12.63□□□□□ -0.39
RBBP4-216ENST00000525506 BACE1P56817 501 aa12.63□□□□□ -0.39
RBBP4-216ENST00000525506 UBE3CQ15386 1083 aa12.63□□□□□ -0.39
RBBP4-216ENST00000525506 ZSCAN25Q6NSZ9 544 aa12.63□□□□□ -0.39
RBBP4-216ENST00000525506 TICAM2Q86XR7 235 aa12.63□□□□□ -0.39
RBBP4-216ENST00000525506 EXOC6Q8TAG9 804 aa12.63□□□□□ -0.39
RBBP4-216ENST00000525506 SDR42E1Q8WUS8 393 aa12.63□□□□□ -0.39
RBBP4-216ENST00000525506 TBC1D2Q9BYX2 928 aa12.63□□□□□ -0.39
RBBP4-216ENST00000525506 ARMT1Q9H993 441 aa12.63□□□□□ -0.39
RBBP4-216ENST00000525506 SERPINB13Q9UIV8 391 aa12.63□□□□□ -0.39
RBBP4-216ENST00000525506 PLXNB2O15031 1838 aa12.62□□□□□ -0.39
RBBP4-216ENST00000525506 PRKAB2O43741 272 aa12.62□□□□□ -0.39
RBBP4-216ENST00000525506 MX1P20591 662 aa12.62□□□□□ -0.39
RBBP4-216ENST00000525506 GRK4P32298 578 aa12.62□□□□□ -0.39
RBBP4-216ENST00000525506 SHMT1P34896 483 aa12.62□□□□□ -0.39
RBBP4-216ENST00000525506 ADD2P35612 726 aa12.62□□□□□ -0.39
RBBP4-216ENST00000525506 PRMT2P55345 433 aa12.62□□□□□ -0.39
RBBP4-216ENST00000525506 ZYXQ15942 572 aaKnown RBP12.62□□□□□ -0.39
RBBP4-216ENST00000525506 LRRFIP1Q32MZ4 808 aaKnown RBP12.62□□□□□ -0.39
RBBP4-216ENST00000525506 TSHZ3Q63HK5 1081 aa12.62□□□□□ -0.39
RBBP4-216ENST00000525506 TATDN1Q6P1N9 297 aa12.62□□□□□ -0.39
RBBP4-216ENST00000525506 TTC6Q86TZ1 520 aa12.62□□□□□ -0.39
RBBP4-216ENST00000525506 P2RX7Q99572 595 aaKnown RBP12.62□□□□□ -0.39
RBBP4-216ENST00000525506 CRNKL1Q9BZJ0 848 aaKnown RBP12.62□□□□□ -0.39
RBBP4-216ENST00000525506 TMOD4Q9NZQ9 345 aa12.62□□□□□ -0.39
RBBP4-216ENST00000525506 PNMA3Q9UL41 463 aa12.62□□□□□ -0.39
RBBP4-216ENST00000525506 USP17L10C9JJH3 530 aa12.61□□□□□ -0.39
RBBP4-216ENST00000525506 SMIM22K7EJ46 135 aa12.61□□□□□ -0.39
RBBP4-216ENST00000525506 TNPO2O14787 897 aaKnown RBP12.61□□□□□ -0.39
RBBP4-216ENST00000525506 MBD4O95243 580 aa12.61□□□□□ -0.39
RBBP4-216ENST00000525506 ZFYP08048 801 aaPredicted RBP12.61□□□□□ -0.39
RBBP4-216ENST00000525506 ELNP15502 786 aa12.61□□□□□ -0.39
RBBP4-216ENST00000525506 FLT3LGP49771 235 aa12.61□□□□□ -0.39
RBBP4-216ENST00000525506 RAB3GAP1Q15042 981 aa12.61□□□□□ -0.39
RBBP4-216ENST00000525506 CERKLQ49MI3 558 aaPredicted RBP12.61□□□□□ -0.39
RBBP4-216ENST00000525506 KBTBD3Q8NAB2 608 aa12.61□□□□□ -0.39
RBBP4-216ENST00000525506 PI4K2BQ8TCG2 481 aa12.61□□□□□ -0.39
RBBP4-216ENST00000525506 EHD4Q9H223 541 aa12.61□□□□□ -0.39
RBBP4-216ENST00000525506 DCP1AQ9NPI6 582 aaPredicted RBP12.61□□□□□ -0.39
RBBP4-216ENST00000525506 EMILIN3Q9NT22 766 aa12.61□□□□□ -0.39
RBBP4-216ENST00000525506 MCM9Q9NXL9 1143 aa12.61□□□□□ -0.39
RBBP4-216ENST00000525506 BIN2Q9UBW5 565 aaPredicted RBP12.61□□□□□ -0.39
RBBP4-216ENST00000525506 STAP2Q9UGK3 403 aa12.61□□□□□ -0.39
RBBP4-216ENST00000525506 CYP2D7A0A087X1C5 515 aa12.6□□□□□ -0.39
RBBP4-216ENST00000525506 C19orf81C9J6K1 198 aa12.6□□□□□ -0.39
RBBP4-216ENST00000525506 ADCY3O60266 1144 aa12.6□□□□□ -0.39
RBBP4-216ENST00000525506 GUCY1A2P33402 732 aa12.6□□□□□ -0.39
RBBP4-216ENST00000525506 IRX3P78415 501 aaPredicted RBP12.6□□□□□ -0.39
RBBP4-216ENST00000525506 PABPC4Q13310 644 aaKnown RBP eCLIP12.6□□□□□ -0.39
RBBP4-216ENST00000525506 FAM110CQ1W6H9 321 aa12.6□□□□□ -0.39
RBBP4-216ENST00000525506 ABCB5Q2M3G0 1257 aa12.6□□□□□ -0.39
RBBP4-216ENST00000525506 ANKRD45Q5TZF3 282 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms