RNA–Protein interactions for RNA: ENST00000524784.1

PACS1-202, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 4

Gene PACS1, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-202ENST00000524784 HERC5Q9UII4 1024 aaKnown RBP12.43□□□□□ -0.42
PACS1-202ENST00000524784 HACL1Q9UJ83 578 aa12.43□□□□□ -0.42
PACS1-202ENST00000524784 SLC12A7Q9Y666 1083 aa12.43□□□□□ -0.42
PACS1-202ENST00000524784 TNKSO95271 1327 aa12.42□□□□□ -0.42
PACS1-202ENST00000524784 KLF18A0A0U1RQI7 1052 aa12.42□□□□□ -0.42
PACS1-202ENST00000524784 IQCA1LA6NCM1 817 aa12.42□□□□□ -0.42
PACS1-202ENST00000524784 EVCP57679 992 aa12.42□□□□□ -0.42
PACS1-202ENST00000524784 CUL4AQ13619 759 aa12.42□□□□□ -0.42
PACS1-202ENST00000524784 IFIT1BQ5T764 474 aaKnown RBP12.42□□□□□ -0.42
PACS1-202ENST00000524784 ANGEL2Q5VTE6 544 aaKnown RBP12.42□□□□□ -0.42
PACS1-202ENST00000524784 DGKHQ86XP1 1220 aa12.42□□□□□ -0.42
PACS1-202ENST00000524784 NEDD1Q8NHV4 660 aa12.42□□□□□ -0.42
PACS1-202ENST00000524784 NKX2-3Q8TAU0 364 aa12.42□□□□□ -0.42
PACS1-202ENST00000524784 TRPM4Q8TD43 1214 aa12.42□□□□□ -0.42
PACS1-202ENST00000524784 INTS4Q96HW7 963 aaKnown RBP12.42□□□□□ -0.42
PACS1-202ENST00000524784 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.42□□□□□ -0.423e-7■■■■■ 34.2
PACS1-202ENST00000524784 GPHNQ9NQX3 736 aaPredicted RBP12.42□□□□□ -0.42
PACS1-202ENST00000524784 FOXD4L1Q9NU39 408 aa12.42□□□□□ -0.42
PACS1-202ENST00000524784 TCP11L1Q9NUJ3 509 aa12.42□□□□□ -0.42
PACS1-202ENST00000524784 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.42□□□□□ -0.42
PACS1-202ENST00000524784 MYH1P12882 1939 aa12.42□□□□□ -0.42
PACS1-202ENST00000524784 CNTNAP1P78357 1384 aa12.42□□□□□ -0.42
PACS1-202ENST00000524784 ECM29Q5VYK3 1845 aa12.41□□□□□ -0.42
PACS1-202ENST00000524784 LAMB1P07942 1786 aa12.41□□□□□ -0.42
PACS1-202ENST00000524784 DHX16O60231 1041 aaKnown RBP12.41□□□□□ -0.42
PACS1-202ENST00000524784 PDIA3P30101 505 aaKnown RBP12.41□□□□□ -0.42
PACS1-202ENST00000524784 STK3Q13188 491 aa12.41□□□□□ -0.42
PACS1-202ENST00000524784 CERKLQ49MI3 558 aaPredicted RBP12.41□□□□□ -0.42
PACS1-202ENST00000524784 PPP4R3BQ5MIZ7 849 aa12.41□□□□□ -0.42
PACS1-202ENST00000524784 USP50Q70EL3 339 aaPredicted RBP12.41□□□□□ -0.42
PACS1-202ENST00000524784 SGMS1Q86VZ5 419 aa12.41□□□□□ -0.42
PACS1-202ENST00000524784 CCDC83Q8IWF9 413 aa12.41□□□□□ -0.42
PACS1-202ENST00000524784 DCPSQ96C86 337 aaKnown RBP12.41□□□□□ -0.42
PACS1-202ENST00000524784 HOOK2Q96ED9 719 aa12.41□□□□□ -0.42
PACS1-202ENST00000524784 CDK5RAP2Q96SN8 1893 aa12.41□□□□□ -0.42
PACS1-202ENST00000524784 TMEM39BQ9GZU3 492 aa12.41□□□□□ -0.42
PACS1-202ENST00000524784 DEFB129Q9H1M3 183 aa12.41□□□□□ -0.42
PACS1-202ENST00000524784 LY9Q9HBG7 655 aa12.41□□□□□ -0.42
PACS1-202ENST00000524784 CWC22Q9HCG8 908 aaKnown RBP12.41□□□□□ -0.42
PACS1-202ENST00000524784 FOCADQ5VW36 1801 aa12.41□□□□□ -0.42
PACS1-202ENST00000524784 GOLGA8BA8MQT2 603 aa12.4□□□□□ -0.42
PACS1-202ENST00000524784 MPHOSPH10O00566 681 aaKnown RBP12.4□□□□□ -0.42
PACS1-202ENST00000524784 ZBTB43O43298 467 aa12.4□□□□□ -0.42
PACS1-202ENST00000524784 TBC1D12O60347 775 aa12.4□□□□□ -0.42
PACS1-202ENST00000524784 PFKFB2O60825 505 aa12.4□□□□□ -0.42
PACS1-202ENST00000524784 SHMT1P34896 483 aa12.4□□□□□ -0.42
PACS1-202ENST00000524784 EPHX2P34913 555 aa12.4□□□□□ -0.42
PACS1-202ENST00000524784 HIRAP54198 1017 aaPredicted RBP12.4□□□□□ -0.42
PACS1-202ENST00000524784 SEC23AQ15436 765 aa12.4□□□□□ -0.42
PACS1-202ENST00000524784 CATIPQ7Z7H3 387 aa12.4□□□□□ -0.42
PACS1-202ENST00000524784 METTL16Q86W50 562 aaKnown RBP12.4□□□□□ -0.42
PACS1-202ENST00000524784 ENAHQ8N8S7 591 aaPredicted RBP12.4□□□□□ -0.42
PACS1-202ENST00000524784 NECAB1Q8N987 351 aa12.4□□□□□ -0.42
PACS1-202ENST00000524784 ANKS1AQ92625 1134 aa12.4□□□□□ -0.42
PACS1-202ENST00000524784 CABP5Q9NP86 173 aa12.4□□□□□ -0.42
PACS1-202ENST00000524784 GGA3Q9NZ52 723 aa12.4□□□□□ -0.42
PACS1-202ENST00000524784 BRPF3Q9ULD4 1205 aa12.4□□□□□ -0.42
PACS1-202ENST00000524784 PPP2R3BQ9Y5P8 575 aa12.4□□□□□ -0.42
PACS1-202ENST00000524784 ASTN2O75129 1339 aaPredicted RBP12.39□□□□□ -0.43
PACS1-202ENST00000524784 NMT2O60551 498 aa12.39□□□□□ -0.43
PACS1-202ENST00000524784 LARGE1O95461 756 aa12.39□□□□□ -0.43
PACS1-202ENST00000524784 CALM1P0DP23 149 aa12.39□□□□□ -0.43
PACS1-202ENST00000524784 CALM2P0DP24 149 aa12.39□□□□□ -0.43
PACS1-202ENST00000524784 CALM3P0DP25 149 aa12.39□□□□□ -0.43
PACS1-202ENST00000524784 AKR1B1P15121 316 aa12.39□□□□□ -0.43
PACS1-202ENST00000524784 CCT2P78371 535 aaKnown RBP12.39□□□□□ -0.43
PACS1-202ENST00000524784 TATDN1Q6P1N9 297 aa12.39□□□□□ -0.43
PACS1-202ENST00000524784 CPLX2Q6PUV4 134 aaKnown RBP12.39□□□□□ -0.43
PACS1-202ENST00000524784 SULF1Q8IWU6 871 aa12.39□□□□□ -0.43
PACS1-202ENST00000524784 NUP133Q8WUM0 1156 aa12.39□□□□□ -0.43
PACS1-202ENST00000524784 GTF3C6Q969F1 213 aa12.39□□□□□ -0.43
PACS1-202ENST00000524784 KAT14Q9H8E8 782 aa12.39□□□□□ -0.43
PACS1-202ENST00000524784 IL17RBQ9NRM6 502 aa12.39□□□□□ -0.43
PACS1-202ENST00000524784 SMC3Q9UQE7 1217 aa12.39□□□□□ -0.43
PACS1-202ENST00000524784 DDX60LQ5H9U9 1706 aaKnown RBP12.39□□□□□ -0.43
PACS1-202ENST00000524784 PITPNM2Q9BZ72 1349 aa12.38□□□□□ -0.43
PACS1-202ENST00000524784 CCDC196A0A1B0GTZ2 297 aa12.38□□□□□ -0.43
PACS1-202ENST00000524784 FAM196BA6NMK8 535 aa12.38□□□□□ -0.43
PACS1-202ENST00000524784 GOLGA8AA7E2F4 631 aa12.38□□□□□ -0.43
PACS1-202ENST00000524784 CPLX1O14810 134 aa12.38□□□□□ -0.43
PACS1-202ENST00000524784 METAP2P50579 478 aaKnown RBP eCLIP12.38□□□□□ -0.43
PACS1-202ENST00000524784 RCAN1P53805 252 aa12.38□□□□□ -0.43
PACS1-202ENST00000524784 SCRN1Q12765 414 aa12.38□□□□□ -0.43
PACS1-202ENST00000524784 PPP2R5BQ15173 497 aa12.38□□□□□ -0.43
PACS1-202ENST00000524784 ABCB5Q2M3G0 1257 aa12.38□□□□□ -0.43
PACS1-202ENST00000524784 SUPT20HL1Q3ZLR7 823 aa12.38□□□□□ -0.43
PACS1-202ENST00000524784 DCAF15Q66K64 600 aa12.38□□□□□ -0.43
PACS1-202ENST00000524784 APOA5Q6Q788 366 aa12.38□□□□□ -0.43
PACS1-202ENST00000524784 TMEM179Q6ZVK1 233 aa12.38□□□□□ -0.43
PACS1-202ENST00000524784 MIGA2Q7L4E1 593 aa12.38□□□□□ -0.43
PACS1-202ENST00000524784 PNMA8AQ86V59 439 aaPredicted RBP12.38□□□□□ -0.43
PACS1-202ENST00000524784 MICU3Q86XE3 530 aa12.38□□□□□ -0.43
PACS1-202ENST00000524784 ZNF654Q8IZM8 581 aa12.38□□□□□ -0.43
PACS1-202ENST00000524784 ZC3H15Q8WU90 426 aaKnown RBP12.38□□□□□ -0.43
PACS1-202ENST00000524784 LLPHQ9BRT6 129 aaKnown RBP12.38□□□□□ -0.43
PACS1-202ENST00000524784 DNAJC18Q9H819 358 aa12.38□□□□□ -0.43
PACS1-202ENST00000524784 SENP2Q9HC62 589 aa12.38□□□□□ -0.43
PACS1-202ENST00000524784 PGAP2Q9UHJ9 254 aa12.38□□□□□ -0.43
PACS1-202ENST00000524784 STX8Q9UNK0 236 aa12.38□□□□□ -0.43
PACS1-202ENST00000524784 SCAF8Q9UPN6 1271 aaKnown RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms