RNA–Protein interactions for RNA: ENST00000524654.1

CTSB-207, Transcript of cathepsin B, humanhuman

TSL 5

Gene CTSB, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-207ENST00000524654 SALL3Q9BXA9 1300 aa13.25□□□□□ -0.29
CTSB-207ENST00000524654 PRKAB2O43741 272 aa13.25□□□□□ -0.29
CTSB-207ENST00000524654 GNRH1P01148 92 aa13.25□□□□□ -0.29
CTSB-207ENST00000524654 POLR3DP05423 398 aaPredicted RBP13.25□□□□□ -0.29
CTSB-207ENST00000524654 CTGFP29279 349 aa13.25□□□□□ -0.29
CTSB-207ENST00000524654 SHMT1P34896 483 aa13.25□□□□□ -0.29
CTSB-207ENST00000524654 HMGCS2P54868 508 aa13.25□□□□□ -0.29
CTSB-207ENST00000524654 BACE1P56817 501 aa13.25□□□□□ -0.29
CTSB-207ENST00000524654 EVX2Q03828 476 aa13.25□□□□□ -0.29
CTSB-207ENST00000524654 GCC1Q96CN9 775 aa13.25□□□□□ -0.29
CTSB-207ENST00000524654 PUS7LQ9H0K6 701 aaKnown RBP13.25□□□□□ -0.29
CTSB-207ENST00000524654 ATP8A2Q9NTI2 1148 aa13.25□□□□□ -0.29
CTSB-207ENST00000524654 AK9Q5TCS8 1911 aa13.24□□□□□ -0.29
CTSB-207ENST00000524654 GH2P01242 217 aa13.24□□□□□ -0.29
CTSB-207ENST00000524654 MTMR2Q13614 643 aa13.24□□□□□ -0.29
CTSB-207ENST00000524654 KIF22Q14807 665 aa13.24□□□□□ -0.29
CTSB-207ENST00000524654 TAOK2Q9UL54 1235 aa13.24□□□□□ -0.29
CTSB-207ENST00000524654 DDX60LQ5H9U9 1706 aaKnown RBP13.24□□□□□ -0.29
CTSB-207ENST00000524654 C19orf81C9J6K1 198 aa13.23□□□□□ -0.29
CTSB-207ENST00000524654 USP17L10C9JJH3 530 aa13.23□□□□□ -0.29
CTSB-207ENST00000524654 ERC2O15083 957 aa13.23□□□□□ -0.29
CTSB-207ENST00000524654 GLRX3O76003 335 aaKnown RBP13.23□□□□□ -0.29
CTSB-207ENST00000524654 CYP2D6P10635 497 aa13.23□□□□□ -0.29
CTSB-207ENST00000524654 MX1P20591 662 aa13.23□□□□□ -0.29
CTSB-207ENST00000524654 SOX10P56693 466 aa13.23□□□□□ -0.29
CTSB-207ENST00000524654 CERKLQ49MI3 558 aaPredicted RBP13.23□□□□□ -0.29
CTSB-207ENST00000524654 ANKRD45Q5TZF3 282 aa13.23□□□□□ -0.29
CTSB-207ENST00000524654 ARMC5Q96C12 935 aa13.23□□□□□ -0.29
CTSB-207ENST00000524654 TRIM47Q96LD4 638 aa13.23□□□□□ -0.29
CTSB-207ENST00000524654 PNMA3Q9UL41 463 aa13.23□□□□□ -0.29
CTSB-207ENST00000524654 CDK5RAP2Q96SN8 1893 aa13.23□□□□□ -0.29
CTSB-207ENST00000524654 PHIPQ8WWQ0 1821 aa13.23□□□□□ -0.29
CTSB-207ENST00000524654 RNF113AO15541 343 aaKnown RBP13.22□□□□□ -0.29
CTSB-207ENST00000524654 ZFYP08048 801 aaPredicted RBP13.22□□□□□ -0.29
CTSB-207ENST00000524654 PSMC4P43686 418 aa13.22□□□□□ -0.29
CTSB-207ENST00000524654 PABPC4Q13310 644 aaKnown RBP eCLIP13.22□□□□□ -0.29
CTSB-207ENST00000524654 ABCB5Q2M3G0 1257 aa13.22□□□□□ -0.29
CTSB-207ENST00000524654 C12orf60Q5U649 245 aa13.22□□□□□ -0.29
CTSB-207ENST00000524654 EXOC6Q8TAG9 804 aa13.22□□□□□ -0.29
CTSB-207ENST00000524654 SMCR8Q8TEV9 937 aaPredicted RBP13.22□□□□□ -0.29
CTSB-207ENST00000524654 APPBP2Q92624 585 aa13.22□□□□□ -0.29
CTSB-207ENST00000524654 OSBP2Q969R2 916 aa13.22□□□□□ -0.29
CTSB-207ENST00000524654 STRBPQ96SI9 672 aaKnown RBP13.22□□□□□ -0.29
CTSB-207ENST00000524654 EMILIN3Q9NT22 766 aa13.22□□□□□ -0.29
CTSB-207ENST00000524654 STAP2Q9UGK3 403 aa13.22□□□□□ -0.29
CTSB-207ENST00000524654 PTCH2Q9Y6C5 1203 aa13.22□□□□□ -0.29
CTSB-207ENST00000524654 SLC4A4Q9Y6R1 1079 aa13.22□□□□□ -0.29
CTSB-207ENST00000524654 USP17L12C9JPN9 530 aa13.21□□□□□ -0.29
CTSB-207ENST00000524654 USP17L21D6R901 530 aa13.21□□□□□ -0.29
CTSB-207ENST00000524654 SMIM22K7EJ46 135 aa13.21□□□□□ -0.29
CTSB-207ENST00000524654 HOXA7P31268 230 aaPredicted RBP13.21□□□□□ -0.29
CTSB-207ENST00000524654 GUCY1A2P33402 732 aa13.21□□□□□ -0.29
CTSB-207ENST00000524654 PRMT2P55345 433 aa13.21□□□□□ -0.29
CTSB-207ENST00000524654 MLLT1Q03111 559 aaPredicted RBP13.21□□□□□ -0.29
CTSB-207ENST00000524654 SMC5Q8IY18 1101 aa13.21□□□□□ -0.29
CTSB-207ENST00000524654 DYNLL2Q96FJ2 89 aa13.21□□□□□ -0.29
CTSB-207ENST00000524654 ASCC2Q9H1I8 757 aaPredicted RBP13.21□□□□□ -0.29
CTSB-207ENST00000524654 TMOD4Q9NZQ9 345 aa13.21□□□□□ -0.29
CTSB-207ENST00000524654 SRRDQ9UH36 339 aa13.21□□□□□ -0.29
CTSB-207ENST00000524654 SWAP70Q9UH65 585 aa13.21□□□□□ -0.29
CTSB-207ENST00000524654 SUPT16HQ9Y5B9 1047 aaKnown RBP13.21□□□□□ -0.29
CTSB-207ENST00000524654 CYP2D7A0A087X1C5 515 aa13.2□□□□□ -0.3
CTSB-207ENST00000524654 GSG1L2A8MUP6 293 aa13.2□□□□□ -0.3
CTSB-207ENST00000524654 FMNL1O95466 1100 aaPredicted RBP13.2□□□□□ -0.3
CTSB-207ENST00000524654 IGHDP01880 384 aa13.2□□□□□ -0.3
CTSB-207ENST00000524654 OSBPP22059 807 aa13.2□□□□□ -0.3
CTSB-207ENST00000524654 GCLCP48506 637 aaPredicted RBP13.2□□□□□ -0.3
CTSB-207ENST00000524654 RAB3GAP1Q15042 981 aa13.2□□□□□ -0.3
CTSB-207ENST00000524654 CTR9Q6PD62 1173 aa13.2□□□□□ -0.3
CTSB-207ENST00000524654 USP17L2Q6R6M4 530 aa13.2□□□□□ -0.3
CTSB-207ENST00000524654 ANKRD13CQ8N6S4 541 aa13.2□□□□□ -0.3
CTSB-207ENST00000524654 SLC44A5Q8NCS7 719 aa13.2□□□□□ -0.3
CTSB-207ENST00000524654 ZNF333Q96JL9 665 aa13.2□□□□□ -0.3
CTSB-207ENST00000524654 C12orf42Q96LP6 360 aa13.2□□□□□ -0.3
CTSB-207ENST00000524654 KIAA1683Q9H0B3 1180 aa13.2□□□□□ -0.3
CTSB-207ENST00000524654 RWDD1Q9H446 243 aaPredicted RBP13.2□□□□□ -0.3
CTSB-207ENST00000524654 CABP5Q9NP86 173 aa13.2□□□□□ -0.3
CTSB-207ENST00000524654 ZBTB47Q9UFB7 747 aaPredicted RBP13.2□□□□□ -0.3
CTSB-207ENST00000524654 LOC285556D6RIA3 1793 aa13.2□□□□□ -0.3
CTSB-207ENST00000524654 M0R2C6 588 aa13.19□□□□□ -0.3
CTSB-207ENST00000524654 ECM2O94769 699 aaPredicted RBP13.19□□□□□ -0.3
CTSB-207ENST00000524654 HOXD10P28358 340 aa13.19□□□□□ -0.3
CTSB-207ENST00000524654 PDE1AP54750 535 aa13.19□□□□□ -0.3
CTSB-207ENST00000524654 FCGRTP55899 365 aa13.19□□□□□ -0.3
CTSB-207ENST00000524654 SEPT2Q15019 361 aa13.19□□□□□ -0.3
CTSB-207ENST00000524654 FAM110CQ1W6H9 321 aa13.19□□□□□ -0.3
CTSB-207ENST00000524654 LRRFIP1Q32MZ4 808 aaKnown RBP13.19□□□□□ -0.3
CTSB-207ENST00000524654 SLC9C1Q4G0N8 1177 aa13.19□□□□□ -0.3
CTSB-207ENST00000524654 GIMAP6Q6P9H5 292 aa13.19□□□□□ -0.3
CTSB-207ENST00000524654 C16orf86Q6ZW13 317 aa13.19□□□□□ -0.3
CTSB-207ENST00000524654 ACER1Q8TDN7 264 aa13.19□□□□□ -0.3
CTSB-207ENST00000524654 DDRGK1Q96HY6 314 aa13.19□□□□□ -0.3
CTSB-207ENST00000524654 GPAA1O43292 621 aa13.18□□□□□ -0.3
CTSB-207ENST00000524654 CDK8P49336 464 aa13.18□□□□□ -0.3
CTSB-207ENST00000524654 USP14P54578 494 aa13.18□□□□□ -0.3
CTSB-207ENST00000524654 SBK1Q52WX2 424 aa13.18□□□□□ -0.3
CTSB-207ENST00000524654 TMEM179Q6ZVK1 233 aa13.18□□□□□ -0.3
CTSB-207ENST00000524654 NBPF11Q86T75 865 aa13.18□□□□□ -0.3
CTSB-207ENST00000524654 AMOTL1Q8IY63 956 aa13.18□□□□□ -0.3
CTSB-207ENST00000524654 P2RX7Q99572 595 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms