RNA–Protein interactions for RNA: ENST00000524646.1

PKP3-202, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 312 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-202ENST00000524646 KANK3Q6NY19 840 aa10.22□□□□□ -0.77
PKP3-202ENST00000524646 INTS5Q6P9B9 1019 aaKnown RBP10.22□□□□□ -0.77
PKP3-202ENST00000524646 SYT10Q6XYQ8 523 aa10.22□□□□□ -0.77
PKP3-202ENST00000524646 CRACR2BQ8N4Y2 399 aaPredicted RBP10.22□□□□□ -0.77
PKP3-202ENST00000524646 MLKLQ8NB16 471 aa10.22□□□□□ -0.77
PKP3-202ENST00000524646 SMARCE1Q969G3 411 aa10.22□□□□□ -0.77
PKP3-202ENST00000524646 CDCA7Q9BWT1 371 aaPredicted RBP10.22□□□□□ -0.77
PKP3-202ENST00000524646 TMX1Q9H3N1 280 aa10.22□□□□□ -0.77
PKP3-202ENST00000524646 INCENPQ9NQS7 918 aa10.22□□□□□ -0.77
PKP3-202ENST00000524646 SEC31BQ9NQW1 1179 aa10.22□□□□□ -0.77
PKP3-202ENST00000524646 INTS13Q9NVM9 706 aa10.22□□□□□ -0.77
PKP3-202ENST00000524646 KCNJ14Q9UNX9 436 aa10.22□□□□□ -0.77
PKP3-202ENST00000524646 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.22□□□□□ -0.77
PKP3-202ENST00000524646 TNKSO95271 1327 aa10.22□□□□□ -0.77
PKP3-202ENST00000524646 BTAF1O14981 1849 aa10.21□□□□□ -0.77
PKP3-202ENST00000524646 MAGEB6P1A0A0J9YX57 407 aa10.21□□□□□ -0.77
PKP3-202ENST00000524646 EXOC5O00471 708 aa10.21□□□□□ -0.77
PKP3-202ENST00000524646 FOXN1O15353 648 aa10.21□□□□□ -0.77
PKP3-202ENST00000524646 ARHGAP6O43182 974 aa10.21□□□□□ -0.77
PKP3-202ENST00000524646 ZSCAN12O43309 604 aa10.21□□□□□ -0.77
PKP3-202ENST00000524646 PCP11498 1178 aaKnown RBP10.21□□□□□ -0.77
PKP3-202ENST00000524646 ZNF18P17022 549 aa10.21□□□□□ -0.77
PKP3-202ENST00000524646 BMP6P22004 513 aa10.21□□□□□ -0.77
PKP3-202ENST00000524646 CYP7A1P22680 504 aa10.21□□□□□ -0.77
PKP3-202ENST00000524646 CRKLP46109 303 aaKnown RBP10.21□□□□□ -0.77
PKP3-202ENST00000524646 CHRNDQ07001 517 aa10.21□□□□□ -0.77
PKP3-202ENST00000524646 TBX2Q13207 712 aaPredicted RBP10.21□□□□□ -0.77
PKP3-202ENST00000524646 KMT5BQ4FZB7 885 aa10.21□□□□□ -0.77
PKP3-202ENST00000524646 CCDC93Q567U6 631 aa10.21□□□□□ -0.77
PKP3-202ENST00000524646 FBXO38Q6PIJ6 1188 aa10.21□□□□□ -0.77
PKP3-202ENST00000524646 TMEM139Q8IV31 216 aa10.21□□□□□ -0.77
PKP3-202ENST00000524646 ENOX1Q8TC92 643 aaKnown RBP10.21□□□□□ -0.77
PKP3-202ENST00000524646 ESR2Q92731 530 aa10.21□□□□□ -0.77
PKP3-202ENST00000524646 SYTL4Q96C24 671 aaPredicted RBP10.21□□□□□ -0.77
PKP3-202ENST00000524646 CCDC34Q96HJ3 373 aa10.21□□□□□ -0.77
PKP3-202ENST00000524646 ZKSCAN3Q9BRR0 538 aa10.21□□□□□ -0.77
PKP3-202ENST00000524646 SRRTQ9BXP5 876 aaKnown RBP10.21□□□□□ -0.77
PKP3-202ENST00000524646 FANCLQ9NW38 375 aa10.21□□□□□ -0.77
PKP3-202ENST00000524646 AATFQ9NY61 560 aaKnown RBP eCLIP10.21□□□□□ -0.77
PKP3-202ENST00000524646 LRP2BPQ9P2M1 347 aa10.21□□□□□ -0.77
PKP3-202ENST00000524646 SERTAD1Q9UHV2 236 aa10.21□□□□□ -0.77
PKP3-202ENST00000524646 DNAI1Q9UI46 699 aa10.21□□□□□ -0.77
PKP3-202ENST00000524646 TAOK2Q9UL54 1235 aa10.21□□□□□ -0.77
PKP3-202ENST00000524646 SRPRBQ9Y5M8 271 aaKnown RBP10.21□□□□□ -0.77
PKP3-202ENST00000524646 SYNRGQ9UMZ2 1314 aa10.21□□□□□ -0.78
PKP3-202ENST00000524646 NHSQ6T4R5 1651 aa10.21□□□□□ -0.78
PKP3-202ENST00000524646 FOCADQ5VW36 1801 aa10.21□□□□□ -0.78
PKP3-202ENST00000524646 TRIM75PA6NK02 468 aa10.2□□□□□ -0.78
PKP3-202ENST00000524646 DDAH1O94760 285 aa10.2□□□□□ -0.78
PKP3-202ENST00000524646 H2AFXP16104 143 aaPredicted RBP10.2□□□□□ -0.78
PKP3-202ENST00000524646 XBP1P17861 261 aa10.2□□□□□ -0.78
PKP3-202ENST00000524646 KRT2P35908 639 aa10.2□□□□□ -0.78
PKP3-202ENST00000524646 SARSP49591 514 aaKnown RBP10.2□□□□□ -0.78
PKP3-202ENST00000524646 BCAMP50895 628 aa10.2□□□□□ -0.78
PKP3-202ENST00000524646 AKAP17AQ02040 695 aaKnown RBP10.2□□□□□ -0.78
PKP3-202ENST00000524646 GRIN1Q05586 938 aa10.2□□□□□ -0.78
PKP3-202ENST00000524646 FMR1Q06787 632 aaKnown RBP eCLIP10.2□□□□□ -0.782e-7■■■□□ 18
PKP3-202ENST00000524646 NR5A1Q13285 461 aa10.2□□□□□ -0.78
PKP3-202ENST00000524646 CT47A1Q5JQC4 288 aaPredicted RBP10.2□□□□□ -0.78
PKP3-202ENST00000524646 HOMER1Q86YM7 354 aa10.2□□□□□ -0.78
PKP3-202ENST00000524646 NUTM2AQ8IVF1 878 aaPredicted RBP10.2□□□□□ -0.78
PKP3-202ENST00000524646 FOXP4Q8IVH2 680 aaPredicted RBP10.2□□□□□ -0.78
PKP3-202ENST00000524646 KRT222Q8N1A0 295 aa10.2□□□□□ -0.78
PKP3-202ENST00000524646 MIGA1Q8NAN2 632 aa10.2□□□□□ -0.78
PKP3-202ENST00000524646 FANCBQ8NB91 859 aa10.2□□□□□ -0.78
PKP3-202ENST00000524646 NUP133Q8WUM0 1156 aa10.2□□□□□ -0.78
PKP3-202ENST00000524646 CNTNAP5Q8WYK1 1306 aa10.2□□□□□ -0.78
PKP3-202ENST00000524646 BRIP1Q9BX63 1249 aa10.2□□□□□ -0.78
PKP3-202ENST00000524646 GNL3LQ9NVN8 582 aaKnown RBP10.2□□□□□ -0.78
PKP3-202ENST00000524646 RBM28Q9NW13 759 aaKnown RBP10.2□□□□□ -0.78
PKP3-202ENST00000524646 RAI14Q9P0K7 980 aa10.2□□□□□ -0.78
PKP3-202ENST00000524646 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.2□□□□□ -0.78
PKP3-202ENST00000524646 ZNF652Q9Y2D9 606 aa10.2□□□□□ -0.78
PKP3-202ENST00000524646 NFE2L3Q9Y4A8 694 aa10.2□□□□□ -0.78
PKP3-202ENST00000524646 PCDHB6Q9Y5E3 794 aa10.2□□□□□ -0.78
PKP3-202ENST00000524646 V9GYY5 206 aaPredicted RBP10.2□□□□□ -0.78
PKP3-202ENST00000524646 PDS5AQ29RF7 1337 aaKnown RBP10.19□□□□□ -0.78
PKP3-202ENST00000524646 SNAP23O00161 211 aa10.19□□□□□ -0.78
PKP3-202ENST00000524646 POLR2DO15514 142 aaKnown RBP10.19□□□□□ -0.78
PKP3-202ENST00000524646 CALM1P0DP23 149 aa10.19□□□□□ -0.78
PKP3-202ENST00000524646 CALM2P0DP24 149 aa10.19□□□□□ -0.78
PKP3-202ENST00000524646 CALM3P0DP25 149 aa10.19□□□□□ -0.78
PKP3-202ENST00000524646 ERCC5P28715 1186 aaPredicted RBP10.19□□□□□ -0.78
PKP3-202ENST00000524646 SPECC1LQ69YQ0 1117 aa10.19□□□□□ -0.78
PKP3-202ENST00000524646 ADGRA1Q86SQ6 560 aa10.19□□□□□ -0.78
PKP3-202ENST00000524646 REXO1L1PQ8IX06 675 aa10.19□□□□□ -0.78
PKP3-202ENST00000524646 TRMT44Q8IYL2 757 aaKnown RBP10.19□□□□□ -0.78
PKP3-202ENST00000524646 SPATA20Q8TB22 786 aa10.19□□□□□ -0.78
PKP3-202ENST00000524646 OXER1Q8TDS5 423 aa10.19□□□□□ -0.78
PKP3-202ENST00000524646 FERMT2Q96AC1 680 aa10.19□□□□□ -0.78
PKP3-202ENST00000524646 RIOK1Q9BRS2 568 aaKnown RBP10.19□□□□□ -0.78
PKP3-202ENST00000524646 PHF20Q9BVI0 1012 aa10.19□□□□□ -0.78
PKP3-202ENST00000524646 BRMS1Q9HCU9 246 aa10.19□□□□□ -0.78
PKP3-202ENST00000524646 NIP7Q9Y221 180 aaKnown RBP eCLIP10.19□□□□□ -0.78
PKP3-202ENST00000524646 VWA3AA6NCI4 1184 aa10.18□□□□□ -0.78
PKP3-202ENST00000524646 SEMA3EO15041 775 aa10.18□□□□□ -0.78
PKP3-202ENST00000524646 PRPF3O43395 683 aaKnown RBP10.18□□□□□ -0.78
PKP3-202ENST00000524646 TADA3O75528 432 aa10.18□□□□□ -0.78
PKP3-202ENST00000524646 FUT2Q10981 343 aa10.18□□□□□ -0.78
PKP3-202ENST00000524646 UBE4AQ14139 1066 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms