RNA–Protein interactions for RNA: ENST00000524533.1

HIF3A-208, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 3

Gene HIF3A, Length 507 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-208ENST00000524533 ZBED9Q6R2W3 1325 aa19.85■□□□□ 0.77
HIF3A-208ENST00000524533 SGPL1O95470 568 aa19.85■□□□□ 0.77
HIF3A-208ENST00000524533 BACE1P56817 501 aa19.85■□□□□ 0.77
HIF3A-208ENST00000524533 IRX3P78415 501 aaPredicted RBP19.85■□□□□ 0.77
HIF3A-208ENST00000524533 JAG1P78504 1218 aa19.85■□□□□ 0.77
HIF3A-208ENST00000524533 ERC1Q8IUD2 1116 aa19.85■□□□□ 0.77
HIF3A-208ENST00000524533 GINM1Q9NU53 330 aa19.85■□□□□ 0.77
HIF3A-208ENST00000524533 ZBTB21Q9ULJ3 1066 aa19.85■□□□□ 0.77
HIF3A-208ENST00000524533 EXOC6BQ9Y2D4 811 aa19.85■□□□□ 0.77
HIF3A-208ENST00000524533 DOCK3Q8IZD9 2030 aa19.85■□□□□ 0.77
HIF3A-208ENST00000524533 SHROOM1Q2M3G4 852 aaPredicted RBP19.84■□□□□ 0.77
HIF3A-208ENST00000524533 CERS3Q8IU89 383 aa19.84■□□□□ 0.77
HIF3A-208ENST00000524533 MIGA1Q8NAN2 632 aa19.84■□□□□ 0.77
HIF3A-208ENST00000524533 NDUFB9Q9Y6M9 179 aa19.84■□□□□ 0.77
HIF3A-208ENST00000524533 DDX60LQ5H9U9 1706 aaKnown RBP19.84■□□□□ 0.77
HIF3A-208ENST00000524533 NAV1Q8NEY1 1877 aa19.84■□□□□ 0.77
HIF3A-208ENST00000524533 PLXNB2O15031 1838 aa19.83■□□□□ 0.77
HIF3A-208ENST00000524533 USP5P45974 858 aa19.83■□□□□ 0.77
HIF3A-208ENST00000524533 FXR1P51114 621 aaKnown RBP eCLIP19.83■□□□□ 0.77
HIF3A-208ENST00000524533 DIEXFQ68CQ4 756 aaKnown RBP19.83■□□□□ 0.77
HIF3A-208ENST00000524533 AACSQ86V21 672 aa19.83■□□□□ 0.77
HIF3A-208ENST00000524533 MAGEB6Q8N7X4 407 aa19.83■□□□□ 0.77
HIF3A-208ENST00000524533 PANK1Q8TE04 598 aa19.83■□□□□ 0.77
HIF3A-208ENST00000524533 DEFB118Q96PH6 123 aa19.83■□□□□ 0.77
HIF3A-208ENST00000524533 PAK6Q9NQU5 681 aaPredicted RBP19.83■□□□□ 0.77
HIF3A-208ENST00000524533 MORF4L1Q9UBU8 362 aa19.83■□□□□ 0.77
HIF3A-208ENST00000524533 C19orf81C9J6K1 198 aa19.82■□□□□ 0.76
HIF3A-208ENST00000524533 USP17L10C9JJH3 530 aa19.82■□□□□ 0.76
HIF3A-208ENST00000524533 CAPN2P17655 700 aa19.82■□□□□ 0.76
HIF3A-208ENST00000524533 HOXA7P31268 230 aaPredicted RBP19.82■□□□□ 0.76
HIF3A-208ENST00000524533 MAP3K12Q12852 859 aa19.82■□□□□ 0.76
HIF3A-208ENST00000524533 TFRCP02786 760 aaKnown RBP19.81■□□□□ 0.76
HIF3A-208ENST00000524533 HMGCRP04035 888 aa19.81■□□□□ 0.76
HIF3A-208ENST00000524533 HERVK_113P62684 666 aa19.81■□□□□ 0.76
HIF3A-208ENST00000524533 TMED8Q6PL24 325 aaPredicted RBP19.81■□□□□ 0.76
HIF3A-208ENST00000524533 CHRDL2Q6WN34 429 aa19.81■□□□□ 0.76
HIF3A-208ENST00000524533 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.81■□□□□ 0.76
HIF3A-208ENST00000524533 ANTXR1Q9H6X2 564 aa19.81■□□□□ 0.76
HIF3A-208ENST00000524533 HSP90AB4PQ58FF6 505 aa19.8■□□□□ 0.76
HIF3A-208ENST00000524533 P2RX7Q99572 595 aaKnown RBP19.8■□□□□ 0.76
HIF3A-208ENST00000524533 IL1RAPL2Q9NP60 686 aa19.8■□□□□ 0.76
HIF3A-208ENST00000524533 GH2P01242 217 aa19.79■□□□□ 0.76
HIF3A-208ENST00000524533 EHD4Q9H223 541 aa19.79■□□□□ 0.76
HIF3A-208ENST00000524533 SERPINB13Q9UIV8 391 aa19.79■□□□□ 0.76
HIF3A-208ENST00000524533 GJD2Q9UKL4 321 aa19.79■□□□□ 0.76
HIF3A-208ENST00000524533 NR2E3Q9Y5X4 410 aa19.79■□□□□ 0.76
HIF3A-208ENST00000524533 MS4A1P11836 297 aa19.78■□□□□ 0.76
HIF3A-208ENST00000524533 TATDN1Q6P1N9 297 aa19.78■□□□□ 0.76
HIF3A-208ENST00000524533 USP17L2Q6R6M4 530 aa19.78■□□□□ 0.76
HIF3A-208ENST00000524533 TTC6Q86TZ1 520 aa19.78■□□□□ 0.76
HIF3A-208ENST00000524533 GPRC5AQ8NFJ5 357 aa19.78■□□□□ 0.76
HIF3A-208ENST00000524533 RHPN1Q8TCX5 695 aa19.78■□□□□ 0.76
HIF3A-208ENST00000524533 CRISPLD2Q9H0B8 497 aa19.78■□□□□ 0.76
HIF3A-208ENST00000524533 TXNRD2Q9NNW7 524 aa19.78■□□□□ 0.76
HIF3A-208ENST00000524533 TRIOBPQ9H2D6 2365 aa19.77■□□□□ 0.76
HIF3A-208ENST00000524533 PEX10O60683 326 aa19.77■□□□□ 0.76
HIF3A-208ENST00000524533 TTF1Q15361 905 aaPredicted RBP19.77■□□□□ 0.76
HIF3A-208ENST00000524533 GTF3C2Q8WUA4 911 aaPredicted RBP19.77■□□□□ 0.76
HIF3A-208ENST00000524533 SOCS4Q8WXH5 440 aa19.77■□□□□ 0.76
HIF3A-208ENST00000524533 FEZ1Q99689 392 aa19.77■□□□□ 0.76
HIF3A-208ENST00000524533 EMILIN3Q9NT22 766 aa19.77■□□□□ 0.76
HIF3A-208ENST00000524533 ALPK3Q96L96 1907 aa19.76■□□□□ 0.75
HIF3A-208ENST00000524533 APBB1O00213 710 aa19.76■□□□□ 0.75
HIF3A-208ENST00000524533 TRIM32Q13049 653 aa19.76■□□□□ 0.75
HIF3A-208ENST00000524533 PDE3AQ14432 1141 aa19.76■□□□□ 0.75
HIF3A-208ENST00000524533 ZYXQ15942 572 aaKnown RBP19.76■□□□□ 0.75
HIF3A-208ENST00000524533 TRIB2Q92519 343 aa19.76■□□□□ 0.75
HIF3A-208ENST00000524533 RIOK1Q9BRS2 568 aaKnown RBP19.76■□□□□ 0.75
HIF3A-208ENST00000524533 PAGR1Q9BTK6 254 aa19.76■□□□□ 0.75
HIF3A-208ENST00000524533 HMX1Q9NP08 348 aaPredicted RBP19.76■□□□□ 0.75
HIF3A-208ENST00000524533 RBPJLQ9UBG7 517 aa19.76■□□□□ 0.75
HIF3A-208ENST00000524533 RPTORQ8N122 1335 aa19.76■□□□□ 0.75
HIF3A-208ENST00000524533 MAGEB6P1A0A0J9YX57 407 aa19.75■□□□□ 0.75
HIF3A-208ENST00000524533 EVI5O60447 810 aa19.75■□□□□ 0.75
HIF3A-208ENST00000524533 CYP2B6P20813 491 aa19.75■□□□□ 0.75
HIF3A-208ENST00000524533 MAPK4P31152 587 aa19.75■□□□□ 0.75
HIF3A-208ENST00000524533 ERVK-9P63128 1117 aa19.75■□□□□ 0.75
HIF3A-208ENST00000524533 ERVK-24P63145 666 aa19.75■□□□□ 0.75
HIF3A-208ENST00000524533 RAB3GAP1Q15042 981 aa19.75■□□□□ 0.75
HIF3A-208ENST00000524533 ABCB5Q2M3G0 1257 aa19.75■□□□□ 0.75
HIF3A-208ENST00000524533 CERKLQ49MI3 558 aaPredicted RBP19.75■□□□□ 0.75
HIF3A-208ENST00000524533 CCAR1Q8IX12 1150 aaKnown RBP19.75■□□□□ 0.75
HIF3A-208ENST00000524533 CLASRPQ8N2M8 674 aaKnown RBP19.75■□□□□ 0.75
HIF3A-208ENST00000524533 KIF1BPQ96EK5 621 aa19.75■□□□□ 0.75
HIF3A-208ENST00000524533 PAWRQ96IZ0 340 aaKnown RBP19.75■□□□□ 0.75
HIF3A-208ENST00000524533 C12orf42Q96LP6 360 aa19.75■□□□□ 0.75
HIF3A-208ENST00000524533 NUDT12Q9BQG2 462 aa19.75■□□□□ 0.75
HIF3A-208ENST00000524533 RBM27Q9P2N5 1060 aaKnown RBP19.75■□□□□ 0.75
HIF3A-208ENST00000524533 HMMRO75330 724 aa19.74■□□□□ 0.75
HIF3A-208ENST00000524533 PDE6AP16499 860 aa19.74■□□□□ 0.75
HIF3A-208ENST00000524533 USP14P54578 494 aa19.74■□□□□ 0.75
HIF3A-208ENST00000524533 SLC9C2Q5TAH2 1124 aa19.74■□□□□ 0.75
HIF3A-208ENST00000524533 NECAB2Q7Z6G3 386 aa19.74■□□□□ 0.75
HIF3A-208ENST00000524533 RPAP2Q8IXW5 612 aaPredicted RBP19.74■□□□□ 0.75
HIF3A-208ENST00000524533 ANKLE1Q8NAG6 615 aa19.74■□□□□ 0.75
HIF3A-208ENST00000524533 DIS3LQ8TF46 1054 aaKnown RBP19.74■□□□□ 0.75
HIF3A-208ENST00000524533 DNAJC2Q99543 621 aaKnown RBP19.74■□□□□ 0.75
HIF3A-208ENST00000524533 CRNKL1Q9BZJ0 848 aaKnown RBP19.74■□□□□ 0.75
HIF3A-208ENST00000524533 DDX19BQ9UMR2 479 aa19.74■□□□□ 0.75
HIF3A-208ENST00000524533 IFIT2P09913 472 aaKnown RBP19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms