RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 MRPL41Q8IXM3 137 aaKnown RBP5.93□□□□□ -1.46
SKP1-212ENST00000523966 FBLIM1Q8WUP2 373 aa5.93□□□□□ -1.46
SKP1-212ENST00000523966 ACSF2Q96CM8 615 aaPredicted RBP5.93□□□□□ -1.46
SKP1-212ENST00000523966 FAM46AQ96IP4 442 aaKnown RBP5.93□□□□□ -1.46
SKP1-212ENST00000523966 NBPF4Q96M43 638 aa5.93□□□□□ -1.46
SKP1-212ENST00000523966 FOXQ1Q9C009 403 aa5.93□□□□□ -1.46
SKP1-212ENST00000523966 LGR6Q9HBX8 967 aa5.93□□□□□ -1.46
SKP1-212ENST00000523966 ACTR10Q9NZ32 417 aa5.93□□□□□ -1.46
SKP1-212ENST00000523966 TJP2Q9UDY2 1190 aa5.93□□□□□ -1.46
SKP1-212ENST00000523966 FAM95CA0A1B0GW59 222 aa5.92□□□□□ -1.46
SKP1-212ENST00000523966 MEIS3P2A8K0S8 358 aa5.92□□□□□ -1.46
SKP1-212ENST00000523966 CHURC1-FNTBB4DL54 471 aa5.92□□□□□ -1.46
SKP1-212ENST00000523966 NEFMP07197 916 aa5.92□□□□□ -1.46
SKP1-212ENST00000523966 NFICP08651 508 aa5.92□□□□□ -1.46
SKP1-212ENST00000523966 GUCY2CP25092 1073 aa5.92□□□□□ -1.46
SKP1-212ENST00000523966 GATA4P43694 442 aa5.92□□□□□ -1.46
SKP1-212ENST00000523966 FXNQ16595 210 aa5.92□□□□□ -1.46
SKP1-212ENST00000523966 OVOS1Q6IE37 1185 aa5.92□□□□□ -1.46
SKP1-212ENST00000523966 CDPF1Q6NVV7 123 aa5.92□□□□□ -1.46
SKP1-212ENST00000523966 MFSD2AQ8NA29 543 aa5.92□□□□□ -1.46
SKP1-212ENST00000523966 ATG4CQ96DT6 458 aa5.92□□□□□ -1.46
SKP1-212ENST00000523966 DCAF5Q96JK2 942 aa5.92□□□□□ -1.46
SKP1-212ENST00000523966 MYRFLQ96LU7 910 aa5.92□□□□□ -1.46
SKP1-212ENST00000523966 CCDC74BQ96LY2 380 aa5.92□□□□□ -1.46
SKP1-212ENST00000523966 ANTXR1Q9H6X2 564 aa5.92□□□□□ -1.46
SKP1-212ENST00000523966 KRBA1A5PL33 1030 aa5.91□□□□□ -1.46
SKP1-212ENST00000523966 UPK3BL1B0FP48 263 aa5.91□□□□□ -1.46
SKP1-212ENST00000523966 C1QTNF9BB2RNN3 333 aa5.91□□□□□ -1.46
SKP1-212ENST00000523966 UPK3BL2E5RIL1 263 aa5.91□□□□□ -1.46
SKP1-212ENST00000523966 LRIG2O94898 1065 aa5.91□□□□□ -1.46
SKP1-212ENST00000523966 CST3P01034 146 aaPredicted RBP5.91□□□□□ -1.46
SKP1-212ENST00000523966 NME1P15531 152 aaKnown RBP5.91□□□□□ -1.46
SKP1-212ENST00000523966 SGO2Q562F6 1265 aa5.91□□□□□ -1.46
SKP1-212ENST00000523966 PRAMEF13Q5VWM6 474 aa5.91□□□□□ -1.46
SKP1-212ENST00000523966 CDCP2Q5VXM1 449 aa5.91□□□□□ -1.46
SKP1-212ENST00000523966 LARP1BQ659C4 914 aaKnown RBP5.91□□□□□ -1.46
SKP1-212ENST00000523966 INTS3Q68E01 1043 aaKnown RBP5.91□□□□□ -1.46
SKP1-212ENST00000523966 DPH6Q7L8W6 267 aa5.91□□□□□ -1.46
SKP1-212ENST00000523966 FAM20CQ8IXL6 584 aa5.91□□□□□ -1.46
SKP1-212ENST00000523966 DZIP1LQ8IYY4 767 aaKnown RBP5.91□□□□□ -1.46
SKP1-212ENST00000523966 XAGE3Q8WTP9 111 aa5.91□□□□□ -1.46
SKP1-212ENST00000523966 HNRNPLLQ8WVV9 542 aaKnown RBP5.91□□□□□ -1.46
SKP1-212ENST00000523966 MEGF10Q96KG7 1140 aa5.91□□□□□ -1.46
SKP1-212ENST00000523966 DHRS1Q96LJ7 313 aa5.91□□□□□ -1.46
SKP1-212ENST00000523966 ACSS3Q9H6R3 686 aa5.91□□□□□ -1.46
SKP1-212ENST00000523966 CNNM2Q9H8M5 875 aa5.91□□□□□ -1.46
SKP1-212ENST00000523966 FBRSQ9HAH7 460 aa5.91□□□□□ -1.46
SKP1-212ENST00000523966 SIRPGQ9P1W8 387 aa5.91□□□□□ -1.46
SKP1-212ENST00000523966 CAP2P40123 477 aa5.9□□□□□ -1.46
SKP1-212ENST00000523966 CASP7P55210 303 aa5.9□□□□□ -1.46
SKP1-212ENST00000523966 NFE2L2Q16236 605 aa5.9□□□□□ -1.46
SKP1-212ENST00000523966 NKG7Q16617 165 aa5.9□□□□□ -1.46
SKP1-212ENST00000523966 RUFY4Q6ZNE9 571 aa5.9□□□□□ -1.46
SKP1-212ENST00000523966 BEND4Q6ZU67 534 aa5.9□□□□□ -1.46
SKP1-212ENST00000523966 ARMCX6Q7L4S7 300 aa5.9□□□□□ -1.46
SKP1-212ENST00000523966 TTC6Q86TZ1 520 aa5.9□□□□□ -1.46
SKP1-212ENST00000523966 CD163Q86VB7 1156 aa5.9□□□□□ -1.46
SKP1-212ENST00000523966 CLEC10AQ8IUN9 316 aa5.9□□□□□ -1.46
SKP1-212ENST00000523966 SLFN12Q8IYM2 578 aa5.9□□□□□ -1.46
SKP1-212ENST00000523966 TAB3Q8N5C8 712 aaPredicted RBP5.9□□□□□ -1.46
SKP1-212ENST00000523966 C19orf47Q8N9M1 422 aaKnown RBP5.9□□□□□ -1.46
SKP1-212ENST00000523966 TP53INP1Q96A56 240 aa5.9□□□□□ -1.46
SKP1-212ENST00000523966 KIF2CQ99661 725 aa5.9□□□□□ -1.46
SKP1-212ENST00000523966 DPH2Q9BQC3 489 aaPredicted RBP5.9□□□□□ -1.46
SKP1-212ENST00000523966 LNPKQ9C0E8 428 aa5.9□□□□□ -1.46
SKP1-212ENST00000523966 OSBPL2Q9H1P3 480 aa5.9□□□□□ -1.46
SKP1-212ENST00000523966 SEMA6CQ9H3T2 930 aa5.9□□□□□ -1.46
SKP1-212ENST00000523966 ZSWIM4Q9H7M6 989 aa5.9□□□□□ -1.46
SKP1-212ENST00000523966 STOML1Q9UBI4 398 aa5.9□□□□□ -1.46
SKP1-212ENST00000523966 SHROOM4Q9ULL8 1493 aa5.9□□□□□ -1.47
SKP1-212ENST00000523966 FAM86C2PA6NEL3 165 aa5.89□□□□□ -1.47
SKP1-212ENST00000523966 DDAH1O94760 285 aa5.89□□□□□ -1.47
SKP1-212ENST00000523966 NTF4P34130 210 aa5.89□□□□□ -1.47
SKP1-212ENST00000523966 CCNFP41002 786 aa5.89□□□□□ -1.47
SKP1-212ENST00000523966 CHRNA4P43681 627 aa5.89□□□□□ -1.47
SKP1-212ENST00000523966 RASSF7Q02833 373 aa5.89□□□□□ -1.47
SKP1-212ENST00000523966 RAB33AQ14088 237 aa5.89□□□□□ -1.47
SKP1-212ENST00000523966 SLBPQ14493 270 aaKnown RBP eCLIP5.89□□□□□ -1.47
SKP1-212ENST00000523966 CCDC144BQ3MJ40 725 aa5.89□□□□□ -1.47
SKP1-212ENST00000523966 BBS9Q3SYG4 887 aa5.89□□□□□ -1.47
SKP1-212ENST00000523966 FAM169BQ8N8A8 192 aa5.89□□□□□ -1.47
SKP1-212ENST00000523966 CYB5D2Q8WUJ1 264 aa5.89□□□□□ -1.47
SKP1-212ENST00000523966 EZH1Q92800 747 aaPredicted RBP5.89□□□□□ -1.47
SKP1-212ENST00000523966 MRFAP1L1Q96HT8 127 aa5.89□□□□□ -1.47
SKP1-212ENST00000523966 A0A1W2PQH9 124 aa5.88□□□□□ -1.47
SKP1-212ENST00000523966 TNFRSF10CO14798 259 aa5.88□□□□□ -1.47
SKP1-212ENST00000523966 RGS13O14921 159 aa5.88□□□□□ -1.47
SKP1-212ENST00000523966 CYP7A1P22680 504 aa5.88□□□□□ -1.47
SKP1-212ENST00000523966 ETV3P41162 512 aa5.88□□□□□ -1.47
SKP1-212ENST00000523966 KCNMA1Q12791 1236 aa5.88□□□□□ -1.47
SKP1-212ENST00000523966 ZNF746Q6NUN9 644 aaPredicted RBP5.88□□□□□ -1.47
SKP1-212ENST00000523966 UNC5AQ6ZN44 842 aa5.88□□□□□ -1.47
SKP1-212ENST00000523966 ARMC10Q8N2F6 343 aa5.88□□□□□ -1.47
SKP1-212ENST00000523966 SRPK1Q96SB4 655 aaKnown RBP5.88□□□□□ -1.47
SKP1-212ENST00000523966 MIPEPQ99797 713 aa5.88□□□□□ -1.47
SKP1-212ENST00000523966 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.88□□□□□ -1.47
SKP1-212ENST00000523966 PHAXQ9H814 394 aaKnown RBP5.88□□□□□ -1.47
SKP1-212ENST00000523966 PRDM10Q9NQV6 1147 aa5.88□□□□□ -1.47
SKP1-212ENST00000523966 ST7Q9NRC1 585 aa5.88□□□□□ -1.47
SKP1-212ENST00000523966 TPX2Q9ULW0 747 aaKnown RBP5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms