RNA–Protein interactions for RNA: ENST00000523912.5

CTNNA1-240, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-240ENST00000523912 CENPFP49454 3210 aa10.76□□□□□ -0.69
CTNNA1-240ENST00000523912 MAGEB6P1A0A0J9YX57 407 aa10.75□□□□□ -0.69
CTNNA1-240ENST00000523912 C19orf81C9J6K1 198 aa10.75□□□□□ -0.69
CTNNA1-240ENST00000523912 GDF11O95390 407 aa10.75□□□□□ -0.69
CTNNA1-240ENST00000523912 CTGFP29279 349 aa10.75□□□□□ -0.69
CTNNA1-240ENST00000523912 BACE1P56817 501 aa10.75□□□□□ -0.69
CTNNA1-240ENST00000523912 DYNLL1P63167 89 aaKnown RBP10.75□□□□□ -0.69
CTNNA1-240ENST00000523912 SH3D19Q5HYK7 790 aa10.75□□□□□ -0.69
CTNNA1-240ENST00000523912 METTL16Q86W50 562 aaKnown RBP10.75□□□□□ -0.69
CTNNA1-240ENST00000523912 ANKRD13CQ8N6S4 541 aa10.75□□□□□ -0.69
CTNNA1-240ENST00000523912 PXYLP1Q8TE99 480 aa10.75□□□□□ -0.69
CTNNA1-240ENST00000523912 GTF3C2Q8WUA4 911 aaPredicted RBP10.75□□□□□ -0.69
CTNNA1-240ENST00000523912 DNAJC2Q99543 621 aaKnown RBP10.75□□□□□ -0.69
CTNNA1-240ENST00000523912 FEZ1Q99689 392 aa10.75□□□□□ -0.69
CTNNA1-240ENST00000523912 CRNKL1Q9BZJ0 848 aaKnown RBP10.75□□□□□ -0.69
CTNNA1-240ENST00000523912 BCL11AQ9H165 835 aa10.75□□□□□ -0.69
CTNNA1-240ENST00000523912 EHD4Q9H223 541 aa10.75□□□□□ -0.69
CTNNA1-240ENST00000523912 PRO3102Q9H379 93 aa10.75□□□□□ -0.69
CTNNA1-240ENST00000523912 SERPINB13Q9UIV8 391 aa10.75□□□□□ -0.69
CTNNA1-240ENST00000523912 NR2E3Q9Y5X4 410 aa10.75□□□□□ -0.69
CTNNA1-240ENST00000523912 USP17L10C9JJH3 530 aa10.74□□□□□ -0.69
CTNNA1-240ENST00000523912 CCL5P13501 91 aa10.74□□□□□ -0.69
CTNNA1-240ENST00000523912 PDE6AP16499 860 aa10.74□□□□□ -0.69
CTNNA1-240ENST00000523912 IRF5Q13568 498 aa10.74□□□□□ -0.69
CTNNA1-240ENST00000523912 PDE3AQ14432 1141 aa10.74□□□□□ -0.69
CTNNA1-240ENST00000523912 MTFR1Q15390 333 aa10.74□□□□□ -0.69
CTNNA1-240ENST00000523912 SLC9C2Q5TAH2 1124 aa10.74□□□□□ -0.69
CTNNA1-240ENST00000523912 DPF3Q92784 378 aa10.74□□□□□ -0.69
CTNNA1-240ENST00000523912 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.74□□□□□ -0.69
CTNNA1-240ENST00000523912 ASCC2Q9H1I8 757 aaPredicted RBP10.74□□□□□ -0.69
CTNNA1-240ENST00000523912 TAOK2Q9UL54 1235 aa10.74□□□□□ -0.69
CTNNA1-240ENST00000523912 NDUFB9Q9Y6M9 179 aa10.74□□□□□ -0.69
CTNNA1-240ENST00000523912 GOLIM4O00461 696 aa10.73□□□□□ -0.69
CTNNA1-240ENST00000523912 ADCY3O60266 1144 aa10.73□□□□□ -0.69
CTNNA1-240ENST00000523912 POLR3DP05423 398 aaPredicted RBP10.73□□□□□ -0.69
CTNNA1-240ENST00000523912 FLT3LGP49771 235 aa10.73□□□□□ -0.69
CTNNA1-240ENST00000523912 USP14P54578 494 aa10.73□□□□□ -0.69
CTNNA1-240ENST00000523912 RRP1BQ14684 758 aaKnown RBP10.73□□□□□ -0.69
CTNNA1-240ENST00000523912 USP17L2Q6R6M4 530 aa10.73□□□□□ -0.69
CTNNA1-240ENST00000523912 CHRDL2Q6WN34 429 aa10.73□□□□□ -0.69
CTNNA1-240ENST00000523912 CCAR1Q8IX12 1150 aaKnown RBP10.73□□□□□ -0.69
CTNNA1-240ENST00000523912 AMOTL1Q8IY63 956 aa10.73□□□□□ -0.69
CTNNA1-240ENST00000523912 GPATCH3Q96I76 525 aa10.73□□□□□ -0.69
CTNNA1-240ENST00000523912 RNF208Q9H0X6 261 aa10.73□□□□□ -0.69
CTNNA1-240ENST00000523912 ANTXR1Q9H6X2 564 aa10.73□□□□□ -0.69
CTNNA1-240ENST00000523912 DNAJC18Q9H819 358 aa10.73□□□□□ -0.69
CTNNA1-240ENST00000523912 CABP5Q9NP86 173 aa10.73□□□□□ -0.69
CTNNA1-240ENST00000523912 SGPL1O95470 568 aa10.72□□□□□ -0.69
CTNNA1-240ENST00000523912 GH2P01242 217 aa10.72□□□□□ -0.69
CTNNA1-240ENST00000523912 HOXA7P31268 230 aaPredicted RBP10.72□□□□□ -0.69
CTNNA1-240ENST00000523912 CERKLQ49MI3 558 aaPredicted RBP10.72□□□□□ -0.69
CTNNA1-240ENST00000523912 U2AF1L4Q8WU68 220 aaKnown RBP10.72□□□□□ -0.69
CTNNA1-240ENST00000523912 DDRGK1Q96HY6 314 aa10.72□□□□□ -0.69
CTNNA1-240ENST00000523912 LRRCC1Q9C099 1032 aa10.72□□□□□ -0.69
CTNNA1-240ENST00000523912 CWC22Q9HCG8 908 aaKnown RBP10.72□□□□□ -0.69
CTNNA1-240ENST00000523912 PAG1Q9NWQ8 432 aa10.72□□□□□ -0.69
CTNNA1-240ENST00000523912 MCM9Q9NXL9 1143 aa10.72□□□□□ -0.69
CTNNA1-240ENST00000523912 RBM27Q9P2N5 1060 aaKnown RBP10.72□□□□□ -0.69
CTNNA1-240ENST00000523912 MKI67P46013 3256 aaKnown RBP10.72□□□□□ -0.69
CTNNA1-240ENST00000523912 ZSWIM8A7E2V4 1837 aa10.72□□□□□ -0.69
CTNNA1-240ENST00000523912 BRCA2P51587 3418 aa10.71□□□□□ -0.69
CTNNA1-240ENST00000523912 FARP2O94887 1054 aaPredicted RBP10.71□□□□□ -0.69
CTNNA1-240ENST00000523912 INHAP05111 366 aa10.71□□□□□ -0.69
CTNNA1-240ENST00000523912 HERVK_113P62684 666 aa10.71□□□□□ -0.69
CTNNA1-240ENST00000523912 RAB3GAP1Q15042 981 aa10.71□□□□□ -0.69
CTNNA1-240ENST00000523912 ABCB5Q2M3G0 1257 aa10.71□□□□□ -0.69
CTNNA1-240ENST00000523912 ZSCAN25Q6NSZ9 544 aa10.71□□□□□ -0.69
CTNNA1-240ENST00000523912 TATDN1Q6P1N9 297 aa10.71□□□□□ -0.69
CTNNA1-240ENST00000523912 SIRT2Q8IXJ6 389 aa10.71□□□□□ -0.69
CTNNA1-240ENST00000523912 GPRC5AQ8NFJ5 357 aa10.71□□□□□ -0.69
CTNNA1-240ENST00000523912 SOCS4Q8WXH5 440 aa10.71□□□□□ -0.69
CTNNA1-240ENST00000523912 RIOK1Q9BRS2 568 aaKnown RBP10.71□□□□□ -0.69
CTNNA1-240ENST00000523912 ZNF532Q9HCE3 1301 aa10.71□□□□□ -0.69
CTNNA1-240ENST00000523912 MORF4L1Q9UBU8 362 aa10.71□□□□□ -0.69
CTNNA1-240ENST00000523912 GABRQQ9UN88 632 aa10.71□□□□□ -0.69
CTNNA1-240ENST00000523912 LOC285556D6RIA3 1793 aa10.7□□□□□ -0.7
CTNNA1-240ENST00000523912 HMGCRP04035 888 aa10.7□□□□□ -0.7
CTNNA1-240ENST00000523912 ELNP15502 786 aa10.7□□□□□ -0.7
CTNNA1-240ENST00000523912 ATP5JP18859 108 aa10.7□□□□□ -0.7
CTNNA1-240ENST00000523912 MAPK4P31152 587 aa10.7□□□□□ -0.7
CTNNA1-240ENST00000523912 CCNA1P78396 465 aa10.7□□□□□ -0.7
CTNNA1-240ENST00000523912 CRISPLD2Q9H0B8 497 aa10.7□□□□□ -0.7
CTNNA1-240ENST00000523912 BOLA2Q9H3K6 86 aa10.7□□□□□ -0.7
CTNNA1-240ENST00000523912 SWAP70Q9UH65 585 aa10.7□□□□□ -0.7
CTNNA1-240ENST00000523912 PTPRFP10586 1907 aa10.7□□□□□ -0.7
CTNNA1-240ENST00000523912 USP17L15C9J2P7 530 aa10.69□□□□□ -0.7
CTNNA1-240ENST00000523912 USP17L13C9JLJ4 530 aa10.69□□□□□ -0.7
CTNNA1-240ENST00000523912 USP17L11C9JVI0 530 aa10.69□□□□□ -0.7
CTNNA1-240ENST00000523912 USP17L18D6R9N7 530 aa10.69□□□□□ -0.7
CTNNA1-240ENST00000523912 USP17L22D6RA61 530 aa10.69□□□□□ -0.7
CTNNA1-240ENST00000523912 USP17L17D6RBQ6 530 aa10.69□□□□□ -0.7
CTNNA1-240ENST00000523912 USP17L19D6RCP7 530 aa10.69□□□□□ -0.7
CTNNA1-240ENST00000523912 USP17L20D6RJB6 530 aa10.69□□□□□ -0.7
CTNNA1-240ENST00000523912 MPHOSPH10O00566 681 aaKnown RBP10.69□□□□□ -0.7
CTNNA1-240ENST00000523912 GLRX3O76003 335 aaKnown RBP10.69□□□□□ -0.7
CTNNA1-240ENST00000523912 USP17L24Q0WX57 530 aa10.69□□□□□ -0.7
CTNNA1-240ENST00000523912 GPR153Q6NV75 609 aa10.69□□□□□ -0.7
CTNNA1-240ENST00000523912 TRMT44Q8IYL2 757 aaKnown RBP10.69□□□□□ -0.7
CTNNA1-240ENST00000523912 ANKLE1Q8NAG6 615 aa10.69□□□□□ -0.7
CTNNA1-240ENST00000523912 C12orf42Q96LP6 360 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms