RNA–Protein interactions for RNA: ENST00000523655.1

SREK1-213, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, human

TSL 5

Gene SREK1, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREK1-213	ENST00000523655	FOXQ1	Q9C009	403 aa		7.64	□□□□□ -1.19
SREK1-213	ENST00000523655	MKNK2	Q9HBH9	465 aa		7.64	□□□□□ -1.19
SREK1-213	ENST00000523655	GOLGA2P5	Q9HBQ8	144 aa		7.64	□□□□□ -1.19
SREK1-213	ENST00000523655	LMNB1	P20700	586 aa		7.63	□□□□□ -1.19
SREK1-213	ENST00000523655	XPC	Q01831	940 aa	Predicted RBP	7.63	□□□□□ -1.19
SREK1-213	ENST00000523655	SCARA3	Q6AZY7	606 aa		7.63	□□□□□ -1.19
SREK1-213	ENST00000523655	LRRN4CL	Q8ND94	238 aa		7.63	□□□□□ -1.19
SREK1-213	ENST00000523655	PI4K2B	Q8TCG2	481 aa		7.63	□□□□□ -1.19
SREK1-213	ENST00000523655	RC3H2	Q9HBD1	1191 aa	Known RBP	7.63	□□□□□ -1.19
SREK1-213	ENST00000523655	PRDM5	Q9NQX1	630 aa	Predicted RBP	7.63	□□□□□ -1.19
SREK1-213	ENST00000523655	GTF2IRD1	Q9UHL9	959 aa		7.63	□□□□□ -1.19
SREK1-213	ENST00000523655	TPX2	Q9ULW0	747 aa	Known RBP	7.63	□□□□□ -1.19
SREK1-213	ENST00000523655	SNCAIP	Q9Y6H5	919 aa		7.63	□□□□□ -1.19
SREK1-213	ENST00000523655	SCRIB	Q14160	1630 aa		7.63	□□□□□ -1.19
SREK1-213	ENST00000523655	IGF2BP3	O00425	579 aa	Known RBP eCLIP	7.62	□□□□□ -1.19
SREK1-213	ENST00000523655	MFAP1	P55081	439 aa	Known RBP	7.62	□□□□□ -1.19
SREK1-213	ENST00000523655	RPS26	P62854	115 aa	Known RBP	7.62	□□□□□ -1.19
SREK1-213	ENST00000523655	FGD1	P98174	961 aa		7.62	□□□□□ -1.19
SREK1-213	ENST00000523655	TAF1C	Q15572	869 aa	Predicted RBP	7.62	□□□□□ -1.19
SREK1-213	ENST00000523655	CDKAL1	Q5VV42	579 aa		7.62	□□□□□ -1.19
SREK1-213	ENST00000523655	CDH24	Q86UP0	819 aa		7.62	□□□□□ -1.19
SREK1-213	ENST00000523655	HID1	Q8IV36	788 aa		7.62	□□□□□ -1.19
SREK1-213	ENST00000523655	KCT2	Q8NC54	265 aa		7.62	□□□□□ -1.19
SREK1-213	ENST00000523655	TJP2	Q9UDY2	1190 aa		7.62	□□□□□ -1.19
SREK1-213	ENST00000523655	CORIN	Q9Y5Q5	1042 aa		7.62	□□□□□ -1.19
SREK1-213	ENST00000523655	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	7.62	□□□□□ -1.19
SREK1-213	ENST00000523655	CARMIL2	Q6F5E8	1435 aa		7.61	□□□□□ -1.19
SREK1-213	ENST00000523655	CBX7	O95931	251 aa		7.61	□□□□□ -1.19
SREK1-213	ENST00000523655	IKZF1	Q13422	519 aa		7.61	□□□□□ -1.19
SREK1-213	ENST00000523655	OGFOD2	Q6N063	350 aa		7.61	□□□□□ -1.19
SREK1-213	ENST00000523655	BNC2	Q6ZN30	1099 aa	Predicted RBP	7.61	□□□□□ -1.19
SREK1-213	ENST00000523655	TMC4	Q7Z404	712 aa		7.61	□□□□□ -1.19
SREK1-213	ENST00000523655	PHC3	Q8NDX5	983 aa		7.61	□□□□□ -1.19
SREK1-213	ENST00000523655	HSPA12B	Q96MM6	686 aa		7.61	□□□□□ -1.19
SREK1-213	ENST00000523655	MIR1-1HG	Q9H1L0	117 aa		7.61	□□□□□ -1.19
SREK1-213	ENST00000523655	GNAT3	A8MTJ3	354 aa		7.6	□□□□□ -1.19
SREK1-213	ENST00000523655	PGR	P06401	933 aa		7.6	□□□□□ -1.19
SREK1-213	ENST00000523655	TXK	P42681	527 aa		7.6	□□□□□ -1.19
SREK1-213	ENST00000523655	LETMD1	Q6P1Q0	360 aa		7.6	□□□□□ -1.19
SREK1-213	ENST00000523655	ATP13A1	Q9HD20	1204 aa		7.6	□□□□□ -1.19
SREK1-213	ENST00000523655	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	7.6	□□□□□ -1.19
SREK1-213	ENST00000523655	PITPNM2	Q9BZ72	1349 aa		7.59	□□□□□ -1.19
SREK1-213	ENST00000523655	UPK3BL1	B0FP48	263 aa		7.59	□□□□□ -1.19
SREK1-213	ENST00000523655	UPK3BL2	E5RIL1	263 aa		7.59	□□□□□ -1.19
SREK1-213	ENST00000523655		H3BS24	57 aa		7.59	□□□□□ -1.19
SREK1-213	ENST00000523655	CST3	P01034	146 aa	Predicted RBP	7.59	□□□□□ -1.19
SREK1-213	ENST00000523655	ZP2	Q05996	745 aa		7.59	□□□□□ -1.19
SREK1-213	ENST00000523655	ANGEL2	Q5VTE6	544 aa	Known RBP	7.59	□□□□□ -1.19
SREK1-213	ENST00000523655	SEMA3G	Q9NS98	782 aa		7.59	□□□□□ -1.19
SREK1-213	ENST00000523655	SNX11	Q9Y5W9	270 aa		7.59	□□□□□ -1.19
SREK1-213	ENST00000523655	USP31	Q70CQ4	1352 aa		7.59	□□□□□ -1.2
SREK1-213	ENST00000523655	WASH4P	A8MWX3	477 aa		7.58	□□□□□ -1.2
SREK1-213	ENST00000523655	FAM155A	B1AL88	458 aa	Predicted RBP	7.58	□□□□□ -1.2
SREK1-213	ENST00000523655	PF4	P02776	101 aa		7.58	□□□□□ -1.2
SREK1-213	ENST00000523655	FAM160A1	Q05DH4	1040 aa		7.58	□□□□□ -1.2
SREK1-213	ENST00000523655	SFRP5	Q5T4F7	317 aa		7.58	□□□□□ -1.2
SREK1-213	ENST00000523655	ACSF2	Q96CM8	615 aa	Predicted RBP	7.58	□□□□□ -1.2
SREK1-213	ENST00000523655	VTI1B	Q9UEU0	232 aa		7.58	□□□□□ -1.2
SREK1-213	ENST00000523655	MAPK8IP1	Q9UQF2	711 aa		7.58	□□□□□ -1.2
SREK1-213	ENST00000523655	ARHGEF11	O15085	1522 aa		7.57	□□□□□ -1.2
SREK1-213	ENST00000523655	MINDY4B	A8MYZ0	360 aa		7.57	□□□□□ -1.2
SREK1-213	ENST00000523655	F13A1	P00488	732 aa		7.57	□□□□□ -1.2
SREK1-213	ENST00000523655	JUNB	P17275	347 aa	Predicted RBP	7.57	□□□□□ -1.2
SREK1-213	ENST00000523655	CAP2	P40123	477 aa		7.57	□□□□□ -1.2
SREK1-213	ENST00000523655	TSNAXIP1	Q2TAA8	658 aa		7.57	□□□□□ -1.2
SREK1-213	ENST00000523655	MFSD2A	Q8NA29	543 aa		7.57	□□□□□ -1.2
SREK1-213	ENST00000523655	ASIC4	Q96FT7	647 aa		7.57	□□□□□ -1.2
SREK1-213	ENST00000523655	TMEM87B	Q96K49	555 aa		7.57	□□□□□ -1.2
SREK1-213	ENST00000523655	CARS2	Q9HA77	564 aa	Known RBP	7.57	□□□□□ -1.2
SREK1-213	ENST00000523655	CAPN6	Q9Y6Q1	641 aa		7.57	□□□□□ -1.2
SREK1-213	ENST00000523655	SMARCA2	P51531	1590 aa		7.56	□□□□□ -1.2
SREK1-213	ENST00000523655	SORBS3	O60504	671 aa		7.56	□□□□□ -1.2
SREK1-213	ENST00000523655	ST13	P50502	369 aa	Known RBP	7.56	□□□□□ -1.2
SREK1-213	ENST00000523655	RPL6	Q02878	288 aa	Known RBP	7.56	□□□□□ -1.2
SREK1-213	ENST00000523655	CAMK2G	Q13555	558 aa	Predicted RBP	7.56	□□□□□ -1.2
SREK1-213	ENST00000523655	CCDC27	Q2M243	656 aa		7.56	□□□□□ -1.2
SREK1-213	ENST00000523655	MFSD4A	Q8N468	514 aa		7.56	□□□□□ -1.2
SREK1-213	ENST00000523655	ASB11	Q8WXH4	323 aa		7.56	□□□□□ -1.2
SREK1-213	ENST00000523655	NOC4L	Q9BVI4	516 aa	Known RBP	7.56	□□□□□ -1.2
SREK1-213	ENST00000523655	ST14	Q9Y5Y6	855 aa		7.56	□□□□□ -1.2
SREK1-213	ENST00000523655	GBP2	P32456	591 aa	Predicted RBP	7.55	□□□□□ -1.2
SREK1-213	ENST00000523655	FYB2	Q5VWT5	728 aa		7.55	□□□□□ -1.2
SREK1-213	ENST00000523655	SLC23A3	Q6PIS1	610 aa		7.55	□□□□□ -1.2
SREK1-213	ENST00000523655	FBXO27	Q8NI29	283 aa		7.55	□□□□□ -1.2
SREK1-213	ENST00000523655	FAM168A	Q92567	244 aa		7.55	□□□□□ -1.2
SREK1-213	ENST00000523655	COPRS	Q9NQ92	184 aa		7.55	□□□□□ -1.2
SREK1-213	ENST00000523655	FAM221A	A4D161	298 aa		7.54	□□□□□ -1.2
SREK1-213	ENST00000523655	GRIN3B	O60391	1043 aa		7.54	□□□□□ -1.2
SREK1-213	ENST00000523655	ZNF865	P0CJ78	1059 aa	Predicted RBP	7.54	□□□□□ -1.2
SREK1-213	ENST00000523655	PLCG1	P19174	1290 aa		7.54	□□□□□ -1.2
SREK1-213	ENST00000523655	CLCN7	P51798	805 aa		7.54	□□□□□ -1.2
SREK1-213	ENST00000523655	TNK2	Q07912	1038 aa		7.54	□□□□□ -1.2
SREK1-213	ENST00000523655	ZNF648	Q5T619	568 aa	Predicted RBP	7.54	□□□□□ -1.2
SREK1-213	ENST00000523655	MRPL41	Q8IXM3	137 aa	Known RBP	7.54	□□□□□ -1.2
SREK1-213	ENST00000523655	UBE2F	Q969M7	185 aa		7.54	□□□□□ -1.2
SREK1-213	ENST00000523655	CRELD1	Q96HD1	420 aa		7.54	□□□□□ -1.2
SREK1-213	ENST00000523655	ZSWIM5	Q9P217	1185 aa		7.54	□□□□□ -1.2
SREK1-213	ENST00000523655	LMTK3	Q96Q04	1460 aa		7.54	□□□□□ -1.2
SREK1-213	ENST00000523655	CILP	O75339	1184 aa		7.53	□□□□□ -1.2
SREK1-213	ENST00000523655	ATG4D	Q86TL0	474 aa	Predicted RBP	7.53	□□□□□ -1.2

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