RNA–Protein interactions for RNA: ENST00000523530.1

DENND3-222, Transcript of DENN domain containing 3, human

TSL 2

Gene DENND3, Length 1,552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DENND3-222	ENST00000523530	TRIM34	Q9BYJ4	488 aa		18.84	■□□□□ 0.61
DENND3-222	ENST00000523530	VEZT	Q9HBM0	779 aa		18.84	■□□□□ 0.61
DENND3-222	ENST00000523530	NCOA5	Q9HCD5	579 aa	Known RBP	18.84	■□□□□ 0.61
DENND3-222	ENST00000523530	RNF181	Q9P0P0	153 aa		18.84	■□□□□ 0.61
DENND3-222	ENST00000523530	COL2A1	P02458	1487 aa	Predicted RBP	18.83	■□□□□ 0.61
DENND3-222	ENST00000523530	SHTN1	A0MZ66	631 aa		18.83	■□□□□ 0.6
DENND3-222	ENST00000523530	DHX16	O60231	1041 aa	Known RBP	18.83	■□□□□ 0.6
DENND3-222	ENST00000523530	METAP2	P50579	478 aa	Known RBP eCLIP	18.83	■□□□□ 0.6
DENND3-222	ENST00000523530	CCDC178	Q5BJE1	867 aa		18.83	■□□□□ 0.6
DENND3-222	ENST00000523530	MICU3	Q86XE3	530 aa		18.83	■□□□□ 0.6
DENND3-222	ENST00000523530	EHD4	Q9H223	541 aa		18.83	■□□□□ 0.6
DENND3-222	ENST00000523530	CNOT7	Q9UIV1	285 aa	Known RBP	18.83	■□□□□ 0.6
DENND3-222	ENST00000523530	DDTL	A6NHG4	134 aa	Predicted RBP	18.82	■□□□□ 0.6
DENND3-222	ENST00000523530	GABPA	Q06546	454 aa		18.82	■□□□□ 0.6
DENND3-222	ENST00000523530	GPR162	Q16538	588 aa		18.82	■□□□□ 0.6
DENND3-222	ENST00000523530	RBM26	Q5T8P6	1007 aa	Known RBP	18.82	■□□□□ 0.6
DENND3-222	ENST00000523530	GPC2	Q8N158	579 aa		18.82	■□□□□ 0.6
DENND3-222	ENST00000523530	PI4KB	Q9UBF8	816 aa		18.82	■□□□□ 0.6
DENND3-222	ENST00000523530	HPS5	Q9UPZ3	1129 aa		18.82	■□□□□ 0.6
DENND3-222	ENST00000523530	GOLGA8A	A7E2F4	631 aa		18.81	■□□□□ 0.6
DENND3-222	ENST00000523530	WNT10B	O00744	389 aa		18.81	■□□□□ 0.6
DENND3-222	ENST00000523530	CPLX1	O14810	134 aa		18.81	■□□□□ 0.6
DENND3-222	ENST00000523530	NMT2	O60551	498 aa		18.81	■□□□□ 0.6
DENND3-222	ENST00000523530	ZNF654	Q8IZM8	581 aa		18.81	■□□□□ 0.6
DENND3-222	ENST00000523530	ZBED3	Q96IU2	234 aa	Predicted RBP	18.81	■□□□□ 0.6
DENND3-222	ENST00000523530	MYL10	Q9BUA6	226 aa		18.81	■□□□□ 0.6
DENND3-222	ENST00000523530	ATRNL1	Q5VV63	1379 aa		18.81	■□□□□ 0.6
DENND3-222	ENST00000523530		H7C1D1	291 aa		18.81	■□□□□ 0.6
DENND3-222	ENST00000523530	DTNB	O60941	627 aa		18.81	■□□□□ 0.6
DENND3-222	ENST00000523530	RXRA	P19793	462 aa		18.81	■□□□□ 0.6
DENND3-222	ENST00000523530	RAB3GAP1	Q15042	981 aa		18.81	■□□□□ 0.6
DENND3-222	ENST00000523530	NBPF9	Q3BBW0	867 aa		18.81	■□□□□ 0.6
DENND3-222	ENST00000523530	FKBP1C	Q5VVH2	108 aa		18.81	■□□□□ 0.6
DENND3-222	ENST00000523530	CATIP	Q7Z7H3	387 aa		18.81	■□□□□ 0.6
DENND3-222	ENST00000523530	FAM151A	Q8WW52	585 aa		18.81	■□□□□ 0.6
DENND3-222	ENST00000523530	TCP11L1	Q9NUJ3	509 aa		18.81	■□□□□ 0.6
DENND3-222	ENST00000523530	JAK2	O60674	1132 aa		18.8	■□□□□ 0.6
DENND3-222	ENST00000523530	HMGN5	P82970	282 aa	Known RBP	18.8	■□□□□ 0.6
DENND3-222	ENST00000523530	CPLX2	Q6PUV4	134 aa	Known RBP	18.8	■□□□□ 0.6
DENND3-222	ENST00000523530	SH3BP5L	Q7L8J4	393 aa		18.8	■□□□□ 0.6
DENND3-222	ENST00000523530	CCDC144CP	Q8IYA2	1237 aa		18.8	■□□□□ 0.6
DENND3-222	ENST00000523530	FAM184A	Q8NB25	1140 aa		18.8	■□□□□ 0.6
DENND3-222	ENST00000523530	NSUN7	Q8NE18	718 aa	Known RBP	18.8	■□□□□ 0.6
DENND3-222	ENST00000523530	TAOK2	Q9UL54	1235 aa		18.8	■□□□□ 0.6
DENND3-222	ENST00000523530	PTPDC1	A2A3K4	754 aa		18.79	■□□□□ 0.6
DENND3-222	ENST00000523530	SOCS7	O14512	581 aa		18.79	■□□□□ 0.6
DENND3-222	ENST00000523530	TNNI2	P48788	182 aa		18.79	■□□□□ 0.6
DENND3-222	ENST00000523530	RCAN1	P53805	252 aa		18.79	■□□□□ 0.6
DENND3-222	ENST00000523530	PKP1	Q13835	747 aa		18.79	■□□□□ 0.6
DENND3-222	ENST00000523530	KIF4B	Q2VIQ3	1234 aa		18.79	■□□□□ 0.6
DENND3-222	ENST00000523530	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	18.79	■□□□□ 0.6
DENND3-222	ENST00000523530	C9orf131	Q5VYM1	1079 aa		18.79	■□□□□ 0.6
DENND3-222	ENST00000523530	SAMD7	Q7Z3H4	446 aa		18.79	■□□□□ 0.6
DENND3-222	ENST00000523530	DGKH	Q86XP1	1220 aa		18.79	■□□□□ 0.6
DENND3-222	ENST00000523530	FOXP4	Q8IVH2	680 aa	Predicted RBP	18.79	■□□□□ 0.6
DENND3-222	ENST00000523530	NEDD1	Q8NHV4	660 aa		18.79	■□□□□ 0.6
DENND3-222	ENST00000523530	SMARCC2	Q8TAQ2	1214 aa		18.79	■□□□□ 0.6
DENND3-222	ENST00000523530	NUP133	Q8WUM0	1156 aa		18.79	■□□□□ 0.6
DENND3-222	ENST00000523530	DDX11	Q96FC9	970 aa		18.79	■□□□□ 0.6
DENND3-222	ENST00000523530	CSRNP1	Q96S65	589 aa		18.79	■□□□□ 0.6
DENND3-222	ENST00000523530	KAT14	Q9H8E8	782 aa		18.79	■□□□□ 0.6
DENND3-222	ENST00000523530	KIF3A	Q9Y496	699 aa		18.79	■□□□□ 0.6
DENND3-222	ENST00000523530	NID2	Q14112	1375 aa		18.79	■□□□□ 0.6
DENND3-222	ENST00000523530	CNTNAP1	P78357	1384 aa		18.78	■□□□□ 0.6
DENND3-222	ENST00000523530	CDKL5	O76039	1030 aa		18.78	■□□□□ 0.6
DENND3-222	ENST00000523530	CTDNEP1	O95476	244 aa		18.78	■□□□□ 0.6
DENND3-222	ENST00000523530	CALM1	P0DP23	149 aa		18.78	■□□□□ 0.6
DENND3-222	ENST00000523530	CALM2	P0DP24	149 aa		18.78	■□□□□ 0.6
DENND3-222	ENST00000523530	CALM3	P0DP25	149 aa		18.78	■□□□□ 0.6
DENND3-222	ENST00000523530	PDC	P20941	246 aa		18.78	■□□□□ 0.6
DENND3-222	ENST00000523530	SHMT1	P34896	483 aa		18.78	■□□□□ 0.6
DENND3-222	ENST00000523530	FAM83A	Q86UY5	434 aa		18.78	■□□□□ 0.6
DENND3-222	ENST00000523530	IL17RB	Q9NRM6	502 aa		18.78	■□□□□ 0.6
DENND3-222	ENST00000523530	PLIN4	Q96Q06	1357 aa		18.77	■□□□□ 0.6
DENND3-222	ENST00000523530	WDR33	Q9C0J8	1336 aa	Known RBP	18.77	■□□□□ 0.6
DENND3-222	ENST00000523530	EGFR	P00533	1210 aa		18.77	■□□□□ 0.6
DENND3-222	ENST00000523530	SYT1	P21579	422 aa		18.77	■□□□□ 0.6
DENND3-222	ENST00000523530	RTN1	Q16799	776 aa		18.77	■□□□□ 0.6
DENND3-222	ENST00000523530	GPRC5D	Q9NZD1	345 aa		18.77	■□□□□ 0.6
DENND3-222	ENST00000523530	STX8	Q9UNK0	236 aa		18.77	■□□□□ 0.6
DENND3-222	ENST00000523530	CCDC196	A0A1B0GTZ2	297 aa		18.76	■□□□□ 0.59
DENND3-222	ENST00000523530	STX6	O43752	255 aa		18.76	■□□□□ 0.59
DENND3-222	ENST00000523530	DDAH1	O94760	285 aa		18.76	■□□□□ 0.59
DENND3-222	ENST00000523530	CDC27	P30260	824 aa		18.76	■□□□□ 0.59
DENND3-222	ENST00000523530	ADD1	P35611	737 aa	Known RBP	18.76	■□□□□ 0.59
DENND3-222	ENST00000523530	TNFAIP1	Q13829	316 aa		18.76	■□□□□ 0.59
DENND3-222	ENST00000523530	LARP1B	Q659C4	914 aa	Known RBP	18.76	■□□□□ 0.59
DENND3-222	ENST00000523530	RCSD1	Q6JBY9	416 aa		18.76	■□□□□ 0.59
DENND3-222	ENST00000523530	TNPO1	Q92973	898 aa	Known RBP	18.76	■□□□□ 0.59
DENND3-222	ENST00000523530	GREB1L	Q9C091	1923 aa	Predicted RBP	18.76	■□□□□ 0.59
DENND3-222	ENST00000523530	FAM196B	A6NMK8	535 aa		18.76	■□□□□ 0.59
DENND3-222	ENST00000523530	MPHOSPH10	O00566	681 aa	Known RBP	18.76	■□□□□ 0.59
DENND3-222	ENST00000523530	GRIN3B	O60391	1043 aa		18.76	■□□□□ 0.59
DENND3-222	ENST00000523530	PDIA4	P13667	645 aa	Known RBP	18.76	■□□□□ 0.59
DENND3-222	ENST00000523530	AKR1B1	P15121	316 aa		18.76	■□□□□ 0.59
DENND3-222	ENST00000523530	PPP2R5B	Q15173	497 aa		18.76	■□□□□ 0.59
DENND3-222	ENST00000523530	FANCB	Q8NB91	859 aa		18.76	■□□□□ 0.59
DENND3-222	ENST00000523530	ANKS1A	Q92625	1134 aa		18.76	■□□□□ 0.59
DENND3-222	ENST00000523530	CCDC17	Q96LX7	622 aa		18.76	■□□□□ 0.59
DENND3-222	ENST00000523530	DNAJC18	Q9H819	358 aa		18.76	■□□□□ 0.59

Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms