RNA–Protein interactions for RNA: ENST00000523430.5

SQLE-206, Transcript of squalene epoxidase, humanhuman

TSL 2 BASIC

Gene SQLE, Length 1,879 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-206ENST00000523430 DDX4Q9NQI0 724 aaKnown RBP24.22■■□□□ 1.47
SQLE-206ENST00000523430 TMEM63CQ9P1W3 806 aa24.22■■□□□ 1.47
SQLE-206ENST00000523430 TFIP11Q9UBB9 837 aaKnown RBP24.22■■□□□ 1.47
SQLE-206ENST00000523430 FMNL1O95466 1100 aaPredicted RBP24.21■■□□□ 1.47
SQLE-206ENST00000523430 APOBEC3HQ6NTF7 200 aaKnown RBP24.21■■□□□ 1.47
SQLE-206ENST00000523430 CATIPQ7Z7H3 387 aa24.21■■□□□ 1.47
SQLE-206ENST00000523430 MTFR1LQ9H019 292 aa24.21■■□□□ 1.47
SQLE-206ENST00000523430 PCDHAC2Q9Y5I4 1007 aa24.21■■□□□ 1.47
SQLE-206ENST00000523430 UBE2HP62256 183 aa24.21■■□□□ 1.47
SQLE-206ENST00000523430 ZSCAN23Q3MJ62 389 aa24.21■■□□□ 1.47
SQLE-206ENST00000523430 CDC42EP5Q6NZY7 148 aa24.21■■□□□ 1.47
SQLE-206ENST00000523430 C16orf86Q6ZW13 317 aa24.21■■□□□ 1.47
SQLE-206ENST00000523430 NBPF11Q86T75 865 aa24.21■■□□□ 1.47
SQLE-206ENST00000523430 IL17RBQ9NRM6 502 aa24.21■■□□□ 1.47
SQLE-206ENST00000523430 USP40Q9NVE5 1235 aa24.21■■□□□ 1.47
SQLE-206ENST00000523430 TAOK2Q9UL54 1235 aa24.21■■□□□ 1.47
SQLE-206ENST00000523430 SSRP1Q08945 709 aaKnown RBP24.2■■□□□ 1.46
SQLE-206ENST00000523430 TROAPQ12815 778 aa24.2■■□□□ 1.46
SQLE-206ENST00000523430 R3HDM1Q15032 1099 aaKnown RBP24.2■■□□□ 1.46
SQLE-206ENST00000523430 RCSD1Q6JBY9 416 aa24.2■■□□□ 1.46
SQLE-206ENST00000523430 RTKN2Q8IZC4 609 aa24.2■■□□□ 1.46
SQLE-206ENST00000523430 RASA1P20936 1047 aa24.19■■□□□ 1.46
SQLE-206ENST00000523430 PSME4Q14997 1843 aa24.19■■□□□ 1.46
SQLE-206ENST00000523430 CCDC196A0A1B0GTZ2 297 aa24.19■■□□□ 1.46
SQLE-206ENST00000523430 DDAH1O94760 285 aa24.19■■□□□ 1.46
SQLE-206ENST00000523430 GUCY1A2P33402 732 aa24.19■■□□□ 1.46
SQLE-206ENST00000523430 CDK8P49336 464 aa24.19■■□□□ 1.46
SQLE-206ENST00000523430 CCDC82Q8N4S0 544 aa24.19■■□□□ 1.46
SQLE-206ENST00000523430 ZDHHC15Q96MV8 337 aa24.19■■□□□ 1.46
SQLE-206ENST00000523430 PSMD1Q99460 953 aa24.19■■□□□ 1.46
SQLE-206ENST00000523430 FTOQ9C0B1 505 aaKnown RBP eCLIP24.19■■□□□ 1.463e-8■■■■□ 21
SQLE-206ENST00000523430 ZNF277Q9NRM2 450 aaPredicted RBP24.19■■□□□ 1.46
SQLE-206ENST00000523430 ELP1O95163 1332 aa24.18■■□□□ 1.46
SQLE-206ENST00000523430 FSD2A1L4K1 749 aa24.18■■□□□ 1.46
SQLE-206ENST00000523430 KIF28PB7ZC32 967 aa24.18■■□□□ 1.46
SQLE-206ENST00000523430 TSPY3P0CV98 308 aa24.18■■□□□ 1.46
SQLE-206ENST00000523430 TSPY8P0CW00 308 aa24.18■■□□□ 1.46
SQLE-206ENST00000523430 POLD1P28340 1107 aa24.18■■□□□ 1.46
SQLE-206ENST00000523430 GRIPAP1Q4V328 841 aa24.18■■□□□ 1.46
SQLE-206ENST00000523430 LEO1Q8WVC0 666 aaPredicted RBP24.18■■□□□ 1.46
SQLE-206ENST00000523430 SPATA32Q96LK8 384 aa24.18■■□□□ 1.46
SQLE-206ENST00000523430 SCAND2PQ9GZW5 306 aaPredicted RBP24.18■■□□□ 1.46
SQLE-206ENST00000523430 NT5C2P49902 561 aa24.17■■□□□ 1.46
SQLE-206ENST00000523430 CRACR2BQ8N4Y2 399 aaPredicted RBP24.17■■□□□ 1.46
SQLE-206ENST00000523430 PLEKHA8P1O95397 391 aa24.17■■□□□ 1.46
SQLE-206ENST00000523430 ZNF444Q8N0Y2 327 aaPredicted RBP24.17■■□□□ 1.46
SQLE-206ENST00000523430 BRCA1P38398 1863 aaKnown RBP24.17■■□□□ 1.46
SQLE-206ENST00000523430 CALM1P0DP23 149 aa24.16■■□□□ 1.46
SQLE-206ENST00000523430 CALM2P0DP24 149 aa24.16■■□□□ 1.46
SQLE-206ENST00000523430 CALM3P0DP25 149 aa24.16■■□□□ 1.46
SQLE-206ENST00000523430 TGFB2P61812 414 aa24.16■■□□□ 1.46
SQLE-206ENST00000523430 KIF23Q02241 960 aaPredicted RBP24.16■■□□□ 1.46
SQLE-206ENST00000523430 NFIAQ12857 509 aa24.16■■□□□ 1.46
SQLE-206ENST00000523430 KRT40Q6A162 431 aa24.16■■□□□ 1.46
SQLE-206ENST00000523430 GAS2L3Q86XJ1 694 aa24.16■■□□□ 1.46
SQLE-206ENST00000523430 TRIM22Q8IYM9 498 aa24.16■■□□□ 1.46
SQLE-206ENST00000523430 GOLGA6L3A6NEY3 463 aa24.15■■□□□ 1.46
SQLE-206ENST00000523430 CEBPZQ03701 1054 aaKnown RBP24.15■■□□□ 1.46
SQLE-206ENST00000523430 OSBPL5Q9H0X9 879 aaPredicted RBP24.15■■□□□ 1.46
SQLE-206ENST00000523430 ZNF287Q9HBT7 754 aa24.15■■□□□ 1.46
SQLE-206ENST00000523430 RBM5P52756 815 aaKnown RBP eCLIP24.15■■□□□ 1.46
SQLE-206ENST00000523430 FUT2Q10981 343 aa24.15■■□□□ 1.46
SQLE-206ENST00000523430 PPP2R5BQ15173 497 aa24.15■■□□□ 1.46
SQLE-206ENST00000523430 RGS22Q8NE09 1264 aa24.15■■□□□ 1.46
SQLE-206ENST00000523430 USP28Q96RU2 1077 aa24.15■■□□□ 1.46
SQLE-206ENST00000523430 RBM28Q9NW13 759 aaKnown RBP24.15■■□□□ 1.46
SQLE-206ENST00000523430 PIM2Q9P1W9 311 aa24.15■■□□□ 1.46
SQLE-206ENST00000523430 CACNB3P54284 484 aa24.14■■□□□ 1.45
SQLE-206ENST00000523430 HDLBPQ00341 1268 aaKnown RBP24.14■■□□□ 1.45
SQLE-206ENST00000523430 DGKHQ86XP1 1220 aa24.14■■□□□ 1.45
SQLE-206ENST00000523430 LARGE2Q8N3Y3 721 aa24.14■■□□□ 1.45
SQLE-206ENST00000523430 KAT14Q9H8E8 782 aa24.14■■□□□ 1.45
SQLE-206ENST00000523430 TCP11L1Q9NUJ3 509 aa24.14■■□□□ 1.45
SQLE-206ENST00000523430 DEXIO95424 95 aa24.13■■□□□ 1.45
SQLE-206ENST00000523430 ZNF445P59923 1031 aa24.13■■□□□ 1.45
SQLE-206ENST00000523430 GABPAQ06546 454 aa24.13■■□□□ 1.45
SQLE-206ENST00000523430 TMTC3Q6ZXV5 915 aa24.13■■□□□ 1.45
SQLE-206ENST00000523430 WASF1Q92558 559 aa24.13■■□□□ 1.45
SQLE-206ENST00000523430 MRIQ9BWK5 157 aa24.13■■□□□ 1.45
SQLE-206ENST00000523430 PPP1R1BQ9UD71 204 aaPredicted RBP24.13■■□□□ 1.45
SQLE-206ENST00000523430 SERPINA10Q9UK55 444 aa24.13■■□□□ 1.45
SQLE-206ENST00000523430 CFAP45Q9UL16 551 aa24.13■■□□□ 1.45
SQLE-206ENST00000523430 TRIM29Q14134 588 aa24.13■■□□□ 1.45
SQLE-206ENST00000523430 CTCFLQ8NI51 663 aaPredicted RBP24.13■■□□□ 1.45
SQLE-206ENST00000523430 ANKS1AQ92625 1134 aa24.13■■□□□ 1.45
SQLE-206ENST00000523430 RNF26Q9BY78 433 aaPredicted RBP24.13■■□□□ 1.45
SQLE-206ENST00000523430 BRAPQ7Z569 592 aa24.12■■□□□ 1.45
SQLE-206ENST00000523430 ZNF396Q96N95 335 aaPredicted RBP24.12■■□□□ 1.45
SQLE-206ENST00000523430 CNTNAP5Q8WYK1 1306 aa24.12■■□□□ 1.45
SQLE-206ENST00000523430 SYCE3A1L190 88 aa24.11■■□□□ 1.45
SQLE-206ENST00000523430 RAD17O75943 681 aa24.11■■□□□ 1.45
SQLE-206ENST00000523430 ZFPM1Q8IX07 1006 aa24.11■■□□□ 1.45
SQLE-206ENST00000523430 PNMA1Q8ND90 353 aa24.11■■□□□ 1.45
SQLE-206ENST00000523430 STX8Q9UNK0 236 aa24.11■■□□□ 1.45
SQLE-206ENST00000523430 SIPA1L1O43166 1804 aa24.11■■□□□ 1.45
SQLE-206ENST00000523430 hCG_1642624A0A1W2PR95 340 aa24.11■■□□□ 1.45
SQLE-206ENST00000523430 DALRD3Q5D0E6 543 aaKnown RBP24.11■■□□□ 1.45
SQLE-206ENST00000523430 SOGA3Q5TF21 947 aa24.11■■□□□ 1.45
SQLE-206ENST00000523430 KLHL34Q8N239 644 aa24.11■■□□□ 1.45
SQLE-206ENST00000523430 NEDD1Q8NHV4 660 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms