RNA–Protein interactions for RNA: ENST00000522911.5

SDC2-207, Transcript of syndecan 2, humanhuman

TSL 3 BASIC

Gene SDC2, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-207ENST00000522911 A0A0C4DFX4 3053 aa11.51□□□□□ -0.57
SDC2-207ENST00000522911 USP17L10C9JJH3 530 aa11.51□□□□□ -0.57
SDC2-207ENST00000522911 TFRCP02786 760 aaKnown RBP11.51□□□□□ -0.57
SDC2-207ENST00000522911 BMP8BP34820 402 aa11.51□□□□□ -0.57
SDC2-207ENST00000522911 TTC39AQ5SRH9 613 aa11.51□□□□□ -0.57
SDC2-207ENST00000522911 GPR153Q6NV75 609 aa11.51□□□□□ -0.57
SDC2-207ENST00000522911 NECAB2Q7Z6G3 386 aa11.51□□□□□ -0.57
SDC2-207ENST00000522911 TMEM57Q8N5G2 664 aa11.51□□□□□ -0.57
SDC2-207ENST00000522911 USP6NLQ92738 828 aa11.51□□□□□ -0.57
SDC2-207ENST00000522911 DBNDD2Q9BQY9 259 aa11.51□□□□□ -0.57
SDC2-207ENST00000522911 EHD4Q9H223 541 aa11.51□□□□□ -0.57
SDC2-207ENST00000522911 AATFQ9NY61 560 aaKnown RBP eCLIP11.51□□□□□ -0.57
SDC2-207ENST00000522911 TAOK2Q9UL54 1235 aa11.51□□□□□ -0.57
SDC2-207ENST00000522911 OGDHLQ9ULD0 1010 aa11.51□□□□□ -0.57
SDC2-207ENST00000522911 FOCADQ5VW36 1801 aa11.51□□□□□ -0.57
SDC2-207ENST00000522911 ATAD5Q96QE3 1844 aa11.51□□□□□ -0.57
SDC2-207ENST00000522911 DOCK3Q8IZD9 2030 aa11.5□□□□□ -0.57
SDC2-207ENST00000522911 EVI5O60447 810 aa11.5□□□□□ -0.57
SDC2-207ENST00000522911 ECM2O94769 699 aaPredicted RBP11.5□□□□□ -0.57
SDC2-207ENST00000522911 MAPK4P31152 587 aa11.5□□□□□ -0.57
SDC2-207ENST00000522911 HERVK_113P62684 666 aa11.5□□□□□ -0.57
SDC2-207ENST00000522911 IRX3P78415 501 aaPredicted RBP11.5□□□□□ -0.57
SDC2-207ENST00000522911 MTMR2Q13614 643 aa11.5□□□□□ -0.57
SDC2-207ENST00000522911 TATDN1Q6P1N9 297 aa11.5□□□□□ -0.57
SDC2-207ENST00000522911 LBX2Q6XYB7 198 aa11.5□□□□□ -0.57
SDC2-207ENST00000522911 ADGRA1Q86SQ6 560 aa11.5□□□□□ -0.57
SDC2-207ENST00000522911 TGFBRAP1Q8WUH2 860 aa11.5□□□□□ -0.57
SDC2-207ENST00000522911 HMX1Q9NP08 348 aaPredicted RBP11.5□□□□□ -0.57
SDC2-207ENST00000522911 TMOD4Q9NZQ9 345 aa11.5□□□□□ -0.57
SDC2-207ENST00000522911 DBNLQ9UJU6 430 aaKnown RBP11.5□□□□□ -0.57
SDC2-207ENST00000522911 ZBTB21Q9ULJ3 1066 aa11.5□□□□□ -0.57
SDC2-207ENST00000522911 TNNQ9UQP3 1299 aa11.5□□□□□ -0.57
SDC2-207ENST00000522911 HLA-DOAP06340 250 aa11.49□□□□□ -0.57
SDC2-207ENST00000522911 MNX1P50219 401 aaPredicted RBP11.49□□□□□ -0.57
SDC2-207ENST00000522911 JAG1P78504 1218 aa11.49□□□□□ -0.57
SDC2-207ENST00000522911 GPRC5AQ8NFJ5 357 aa11.49□□□□□ -0.57
SDC2-207ENST00000522911 FRAT1Q92837 279 aaPredicted RBP11.49□□□□□ -0.57
SDC2-207ENST00000522911 PAWRQ96IZ0 340 aaKnown RBP11.49□□□□□ -0.57
SDC2-207ENST00000522911 P2RX7Q99572 595 aaKnown RBP11.49□□□□□ -0.57
SDC2-207ENST00000522911 GDF15Q99988 308 aa11.49□□□□□ -0.57
SDC2-207ENST00000522911 NBPF3Q9H094 633 aa11.49□□□□□ -0.57
SDC2-207ENST00000522911 RBPJLQ9UBG7 517 aa11.49□□□□□ -0.57
SDC2-207ENST00000522911 DNAH12Q6ZR08 3092 aa11.49□□□□□ -0.57
SDC2-207ENST00000522911 SURF6O75683 361 aaKnown RBP11.48□□□□□ -0.57
SDC2-207ENST00000522911 ZAP70P43403 619 aa11.48□□□□□ -0.57
SDC2-207ENST00000522911 ERVK-9P63128 1117 aa11.48□□□□□ -0.57
SDC2-207ENST00000522911 ERVK-24P63145 666 aa11.48□□□□□ -0.57
SDC2-207ENST00000522911 MORN1Q5T089 497 aa11.48□□□□□ -0.57
SDC2-207ENST00000522911 MAPKAPK5Q8IW41 473 aa11.48□□□□□ -0.57
SDC2-207ENST00000522911 CRACR2BQ8N4Y2 399 aaPredicted RBP11.48□□□□□ -0.57
SDC2-207ENST00000522911 TRIB2Q92519 343 aa11.48□□□□□ -0.57
SDC2-207ENST00000522911 CLUAP1Q96AJ1 413 aa11.48□□□□□ -0.57
SDC2-207ENST00000522911 NUDT12Q9BQG2 462 aa11.48□□□□□ -0.57
SDC2-207ENST00000522911 TXNRD2Q9NNW7 524 aa11.48□□□□□ -0.57
SDC2-207ENST00000522911 PALD1Q9ULE6 856 aa11.48□□□□□ -0.57
SDC2-207ENST00000522911 PLXNB2O15031 1838 aa11.48□□□□□ -0.57
SDC2-207ENST00000522911 CDK5RAP2Q96SN8 1893 aa11.48□□□□□ -0.57
SDC2-207ENST00000522911 USP14P54578 494 aa11.47□□□□□ -0.57
SDC2-207ENST00000522911 USP17L2Q6R6M4 530 aa11.47□□□□□ -0.57
SDC2-207ENST00000522911 ERC1Q8IUD2 1116 aa11.47□□□□□ -0.57
SDC2-207ENST00000522911 EAF2Q96CJ1 260 aaPredicted RBP11.47□□□□□ -0.57
SDC2-207ENST00000522911 TRIM34Q9BYJ4 488 aa11.47□□□□□ -0.57
SDC2-207ENST00000522911 KIAA1683Q9H0B3 1180 aa11.47□□□□□ -0.57
SDC2-207ENST00000522911 PIH1D3Q9NQM4 214 aaKnown RBP11.47□□□□□ -0.57
SDC2-207ENST00000522911 SNRKQ9NRH2 765 aa11.47□□□□□ -0.57
SDC2-207ENST00000522911 EMILIN3Q9NT22 766 aa11.47□□□□□ -0.57
SDC2-207ENST00000522911 SERPINB13Q9UIV8 391 aa11.47□□□□□ -0.57
SDC2-207ENST00000522911 RABGAP1Q9Y3P9 1069 aa11.47□□□□□ -0.57
SDC2-207ENST00000522911 LAMA2P24043 3122 aaKnown RBP11.46□□□□□ -0.57
SDC2-207ENST00000522911 HOXC6P09630 235 aa11.46□□□□□ -0.57
SDC2-207ENST00000522911 COL6A1P12109 1028 aa11.46□□□□□ -0.57
SDC2-207ENST00000522911 CYP7A1P22680 504 aa11.46□□□□□ -0.57
SDC2-207ENST00000522911 OS9Q13438 667 aaPredicted RBP11.46□□□□□ -0.57
SDC2-207ENST00000522911 PDE3AQ14432 1141 aa11.46□□□□□ -0.57
SDC2-207ENST00000522911 POTEEQ6S8J3 1075 aa11.46□□□□□ -0.57
SDC2-207ENST00000522911 TTC6Q86TZ1 520 aa11.46□□□□□ -0.57
SDC2-207ENST00000522911 USP17L15C9J2P7 530 aa11.45□□□□□ -0.58
SDC2-207ENST00000522911 USP17L13C9JLJ4 530 aa11.45□□□□□ -0.58
SDC2-207ENST00000522911 USP17L11C9JVI0 530 aa11.45□□□□□ -0.58
SDC2-207ENST00000522911 USP17L18D6R9N7 530 aa11.45□□□□□ -0.58
SDC2-207ENST00000522911 USP17L22D6RA61 530 aa11.45□□□□□ -0.58
SDC2-207ENST00000522911 USP17L17D6RBQ6 530 aa11.45□□□□□ -0.58
SDC2-207ENST00000522911 USP17L19D6RCP7 530 aa11.45□□□□□ -0.58
SDC2-207ENST00000522911 USP17L20D6RJB6 530 aa11.45□□□□□ -0.58
SDC2-207ENST00000522911 IGHA2P01877 340 aa11.45□□□□□ -0.58
SDC2-207ENST00000522911 PRKAR2AP13861 404 aaKnown RBP11.45□□□□□ -0.58
SDC2-207ENST00000522911 RGS2P41220 211 aa11.45□□□□□ -0.58
SDC2-207ENST00000522911 CCNA1P78396 465 aa11.45□□□□□ -0.58
SDC2-207ENST00000522911 GABPAQ06546 454 aa11.45□□□□□ -0.58
SDC2-207ENST00000522911 USP17L24Q0WX57 530 aa11.45□□□□□ -0.58
SDC2-207ENST00000522911 MAP3K12Q12852 859 aa11.45□□□□□ -0.58
SDC2-207ENST00000522911 TRIM32Q13049 653 aa11.45□□□□□ -0.58
SDC2-207ENST00000522911 LRIT3Q3SXY7 679 aa11.45□□□□□ -0.58
SDC2-207ENST00000522911 HSP90AB4PQ58FF6 505 aa11.45□□□□□ -0.58
SDC2-207ENST00000522911 LHX8Q68G74 356 aa11.45□□□□□ -0.58
SDC2-207ENST00000522911 CEP85Q6P2H3 762 aa11.45□□□□□ -0.58
SDC2-207ENST00000522911 GPR142Q7Z601 462 aa11.45□□□□□ -0.58
SDC2-207ENST00000522911 PLEKHH3Q7Z736 793 aa11.45□□□□□ -0.58
SDC2-207ENST00000522911 FTSJ3Q8IY81 847 aaKnown RBP11.45□□□□□ -0.58
SDC2-207ENST00000522911 DIS3LQ8TF46 1054 aaKnown RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms