RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 ZNF790Q6PG37 636 aa8.56□□□□□ -1.04
VPS13B-211ENST00000522802 DLK2Q6UY11 383 aa8.56□□□□□ -1.04
VPS13B-211ENST00000522802 SV2AQ7L0J3 742 aa8.56□□□□□ -1.04
VPS13B-211ENST00000522802 HOMEZQ8IX15 550 aa8.56□□□□□ -1.04
VPS13B-211ENST00000522802 HHIPL1Q96JK4 782 aa8.56□□□□□ -1.04
VPS13B-211ENST00000522802 SUSD3Q96L08 255 aa8.56□□□□□ -1.04
VPS13B-211ENST00000522802 POLR3GLQ9BT43 218 aa8.56□□□□□ -1.04
VPS13B-211ENST00000522802 GPRC5DQ9NZD1 345 aa8.56□□□□□ -1.04
VPS13B-211ENST00000522802 PRAMEF22A3QJZ6 481 aa8.55□□□□□ -1.04
VPS13B-211ENST00000522802 FAM155AB1AL88 458 aaPredicted RBP8.55□□□□□ -1.04
VPS13B-211ENST00000522802 KCNQ3O43525 872 aa8.55□□□□□ -1.04
VPS13B-211ENST00000522802 ARID4AP29374 1257 aaPredicted RBP8.55□□□□□ -1.04
VPS13B-211ENST00000522802 NOGQ13253 232 aa8.55□□□□□ -1.04
VPS13B-211ENST00000522802 C11orf91Q3C1V1 193 aa8.55□□□□□ -1.04
VPS13B-211ENST00000522802 CRY2Q49AN0 593 aa8.55□□□□□ -1.04
VPS13B-211ENST00000522802 ZNF280CQ8ND82 737 aa8.55□□□□□ -1.04
VPS13B-211ENST00000522802 ZCCHC2Q9C0B9 1178 aaKnown RBP8.55□□□□□ -1.04
VPS13B-211ENST00000522802 ANKIB1Q9P2G1 1089 aa8.55□□□□□ -1.04
VPS13B-211ENST00000522802 NIP7Q9Y221 180 aaKnown RBP eCLIP8.55□□□□□ -1.04
VPS13B-211ENST00000522802 NUP98P52948 1817 aa8.54□□□□□ -1.04
VPS13B-211ENST00000522802 LAMB2P55268 1798 aa8.54□□□□□ -1.04
VPS13B-211ENST00000522802 COL3A1P02461 1466 aaPredicted RBP8.54□□□□□ -1.04
VPS13B-211ENST00000522802 NPC1L1Q9UHC9 1359 aa8.54□□□□□ -1.04
VPS13B-211ENST00000522802 SHTN1A0MZ66 631 aa8.54□□□□□ -1.04
VPS13B-211ENST00000522802 GMPSP49915 693 aaPredicted RBP8.54□□□□□ -1.04
VPS13B-211ENST00000522802 AOC3Q16853 763 aa8.54□□□□□ -1.04
VPS13B-211ENST00000522802 SAMD5Q5TGI4 173 aa8.54□□□□□ -1.04
VPS13B-211ENST00000522802 LRRC69Q6ZNQ3 347 aa8.54□□□□□ -1.04
VPS13B-211ENST00000522802 MORC1Q86VD1 984 aa8.54□□□□□ -1.04
VPS13B-211ENST00000522802 GPR161Q8N6U8 529 aaKnown RBP8.54□□□□□ -1.04
VPS13B-211ENST00000522802 TRPM4Q8TD43 1214 aa8.54□□□□□ -1.04
VPS13B-211ENST00000522802 ADARB2Q9NS39 739 aaKnown RBP8.54□□□□□ -1.04
VPS13B-211ENST00000522802 NDFIP2Q9NV92 336 aa8.54□□□□□ -1.04
VPS13B-211ENST00000522802 KLK14Q9P0G3 267 aa8.54□□□□□ -1.04
VPS13B-211ENST00000522802 SZT2Q5T011 3432 aa8.54□□□□□ -1.04
VPS13B-211ENST00000522802 DUOX1Q9NRD9 1551 aa8.53□□□□□ -1.04
VPS13B-211ENST00000522802 CDC14CA4D256 554 aa8.53□□□□□ -1.04
VPS13B-211ENST00000522802 TNFRSF10BO14763 440 aa8.53□□□□□ -1.04
VPS13B-211ENST00000522802 GSK3AP49840 483 aa8.53□□□□□ -1.04
VPS13B-211ENST00000522802 HUNKP57058 714 aa8.53□□□□□ -1.04
VPS13B-211ENST00000522802 TEFQ10587 303 aa8.53□□□□□ -1.04
VPS13B-211ENST00000522802 HIF1AQ16665 826 aa8.53□□□□□ -1.04
VPS13B-211ENST00000522802 FIGNL1Q6PIW4 674 aa8.53□□□□□ -1.04
VPS13B-211ENST00000522802 NIM1KQ8IY84 436 aa8.53□□□□□ -1.04
VPS13B-211ENST00000522802 IL17REQ8NFR9 667 aa8.53□□□□□ -1.04
VPS13B-211ENST00000522802 GTF3C2Q8WUA4 911 aaPredicted RBP8.53□□□□□ -1.04
VPS13B-211ENST00000522802 GTPBP3Q969Y2 492 aaKnown RBP8.53□□□□□ -1.04
VPS13B-211ENST00000522802 FMNL2Q96PY5 1086 aa8.53□□□□□ -1.04
VPS13B-211ENST00000522802 TEX13AQ9BXU3 409 aaPredicted RBP8.53□□□□□ -1.04
VPS13B-211ENST00000522802 PANK3Q9H999 370 aa8.53□□□□□ -1.04
VPS13B-211ENST00000522802 NEUROD4Q9HD90 331 aa8.53□□□□□ -1.04
VPS13B-211ENST00000522802 SAGE1Q9NXZ1 904 aa8.53□□□□□ -1.04
VPS13B-211ENST00000522802 DMGDHQ9UI17 866 aaKnown RBP8.53□□□□□ -1.04
VPS13B-211ENST00000522802 ZNF652Q9Y2D9 606 aa8.53□□□□□ -1.04
VPS13B-211ENST00000522802 PCDHGC4Q9Y5F7 938 aa8.53□□□□□ -1.04
VPS13B-211ENST00000522802 CEMIPQ8WUJ3 1361 aa8.52□□□□□ -1.05
VPS13B-211ENST00000522802 TCERG1O14776 1098 aaKnown RBP8.52□□□□□ -1.05
VPS13B-211ENST00000522802 PPIP5K2O43314 1243 aa8.52□□□□□ -1.05
VPS13B-211ENST00000522802 ALDH1B1P30837 517 aa8.52□□□□□ -1.05
VPS13B-211ENST00000522802 HLFQ16534 295 aa8.52□□□□□ -1.05
VPS13B-211ENST00000522802 IER5Q5VY09 327 aa8.52□□□□□ -1.05
VPS13B-211ENST00000522802 CLEC4GQ6UXB4 293 aa8.52□□□□□ -1.05
VPS13B-211ENST00000522802 TPTE2Q6XPS3 522 aa8.52□□□□□ -1.05
VPS13B-211ENST00000522802 NPM2Q86SE8 214 aaKnown RBP8.52□□□□□ -1.05
VPS13B-211ENST00000522802 HSH2DQ96JZ2 352 aa8.52□□□□□ -1.05
VPS13B-211ENST00000522802 CFHR5Q9BXR6 569 aa8.52□□□□□ -1.05
VPS13B-211ENST00000522802 RNF186Q9NXI6 227 aa8.52□□□□□ -1.05
VPS13B-211ENST00000522802 PGAP2Q9UHJ9 254 aa8.52□□□□□ -1.05
VPS13B-211ENST00000522802 MTMR7Q9Y216 660 aa8.52□□□□□ -1.05
VPS13B-211ENST00000522802 GNEQ9Y223 722 aaKnown RBP8.52□□□□□ -1.05
VPS13B-211ENST00000522802 USP16Q9Y5T5 823 aa8.52□□□□□ -1.05
VPS13B-211ENST00000522802 POLR2AP24928 1970 aaKnown RBP8.52□□□□□ -1.05
VPS13B-211ENST00000522802 TGFBR3LH3BV60 316 aa8.51□□□□□ -1.05
VPS13B-211ENST00000522802 ATXN7O15265 892 aaPredicted RBP8.51□□□□□ -1.05
VPS13B-211ENST00000522802 BNIP3LO60238 219 aa8.51□□□□□ -1.05
VPS13B-211ENST00000522802 TRPA1O75762 1119 aa8.51□□□□□ -1.05
VPS13B-211ENST00000522802 KIF23Q02241 960 aaPredicted RBP8.51□□□□□ -1.05
VPS13B-211ENST00000522802 CXCL9Q07325 125 aa8.51□□□□□ -1.05
VPS13B-211ENST00000522802 KCNMA1Q12791 1236 aa8.51□□□□□ -1.05
VPS13B-211ENST00000522802 HABP4Q5JVS0 413 aaKnown RBP8.51□□□□□ -1.05
VPS13B-211ENST00000522802 FOXR1Q6PIV2 292 aa8.51□□□□□ -1.05
VPS13B-211ENST00000522802 CTU1Q7Z7A3 348 aaKnown RBP8.51□□□□□ -1.05
VPS13B-211ENST00000522802 KCTD17Q8N5Z5 321 aa8.51□□□□□ -1.05
VPS13B-211ENST00000522802 HELQQ8TDG4 1101 aa8.51□□□□□ -1.05
VPS13B-211ENST00000522802 IFT43Q96FT9 208 aa8.51□□□□□ -1.05
VPS13B-211ENST00000522802 DNMT3AQ9Y6K1 912 aaPredicted RBP8.51□□□□□ -1.05
VPS13B-211ENST00000522802 LRRC37AA6NMS7 1700 aa8.51□□□□□ -1.05
VPS13B-211ENST00000522802 FAM157BP0CG42 384 aa8.5□□□□□ -1.05
VPS13B-211ENST00000522802 TAF1P21675 1872 aa8.5□□□□□ -1.05
VPS13B-211ENST00000522802 BRD2P25440 801 aaKnown RBP8.5□□□□□ -1.05
VPS13B-211ENST00000522802 TNP2Q05952 138 aa8.5□□□□□ -1.05
VPS13B-211ENST00000522802 KCNA1Q09470 495 aa8.5□□□□□ -1.05
VPS13B-211ENST00000522802 FAM26DQ5JW98 314 aa8.5□□□□□ -1.05
VPS13B-211ENST00000522802 RGMBQ6NW40 437 aa8.5□□□□□ -1.05
VPS13B-211ENST00000522802 BTLAQ7Z6A9 289 aa8.5□□□□□ -1.05
VPS13B-211ENST00000522802 CCER1Q8TC90 406 aaPredicted RBP8.5□□□□□ -1.05
VPS13B-211ENST00000522802 RPGRQ92834 1020 aaKnown RBP8.5□□□□□ -1.05
VPS13B-211ENST00000522802 STIM2Q9P246 746 aa8.5□□□□□ -1.05
VPS13B-211ENST00000522802 HCN2Q9UL51 889 aa8.5□□□□□ -1.05
VPS13B-211ENST00000522802 RBBP6Q7Z6E9 1792 aaKnown RBP8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms