RNA–Protein interactions for RNA: ENST00000522348.1

SPARC-205, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 3

Gene SPARC, Length 497 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-205ENST00000522348 TSPY3P0CV98 308 aa11.27□□□□□ -0.61
SPARC-205ENST00000522348 TSPY8P0CW00 308 aa11.27□□□□□ -0.61
SPARC-205ENST00000522348 RXRAP19793 462 aa11.27□□□□□ -0.61
SPARC-205ENST00000522348 CDK8P49336 464 aa11.27□□□□□ -0.61
SPARC-205ENST00000522348 SCNN1DP51172 638 aa11.27□□□□□ -0.61
SPARC-205ENST00000522348 TRIM29Q14134 588 aa11.27□□□□□ -0.61
SPARC-205ENST00000522348 DALRD3Q5D0E6 543 aaKnown RBP11.27□□□□□ -0.61
SPARC-205ENST00000522348 FAM47AQ5JRC9 791 aa11.27□□□□□ -0.61
SPARC-205ENST00000522348 CCDC144CPQ8IYA2 1237 aa11.27□□□□□ -0.61
SPARC-205ENST00000522348 CRACR2BQ8N4Y2 399 aaPredicted RBP11.27□□□□□ -0.61
SPARC-205ENST00000522348 GPT2Q8TD30 523 aa11.27□□□□□ -0.61
SPARC-205ENST00000522348 NUP133Q8WUM0 1156 aa11.27□□□□□ -0.61
SPARC-205ENST00000522348 SYAP1Q96A49 352 aaPredicted RBP11.27□□□□□ -0.61
SPARC-205ENST00000522348 DYNLL2Q96FJ2 89 aa11.27□□□□□ -0.61
SPARC-205ENST00000522348 SYT17Q9BSW7 474 aa11.27□□□□□ -0.61
SPARC-205ENST00000522348 ALG1Q9BT22 464 aa11.27□□□□□ -0.61
SPARC-205ENST00000522348 MXD3Q9BW11 206 aa11.27□□□□□ -0.61
SPARC-205ENST00000522348 SAP30BPQ9UHR5 308 aaKnown RBP11.27□□□□□ -0.61
SPARC-205ENST00000522348 ELP1O95163 1332 aa11.27□□□□□ -0.61
SPARC-205ENST00000522348 MYO3BQ8WXR4 1341 aa11.27□□□□□ -0.61
SPARC-205ENST00000522348 PRPF3O43395 683 aaKnown RBP11.26□□□□□ -0.61
SPARC-205ENST00000522348 DEXIO95424 95 aa11.26□□□□□ -0.61
SPARC-205ENST00000522348 KIF5BP33176 963 aa11.26□□□□□ -0.61
SPARC-205ENST00000522348 AKAP17AQ02040 695 aaKnown RBP11.26□□□□□ -0.61
SPARC-205ENST00000522348 TROAPQ12815 778 aa11.26□□□□□ -0.61
SPARC-205ENST00000522348 CDC42EP5Q6NZY7 148 aa11.26□□□□□ -0.61
SPARC-205ENST00000522348 BRAPQ7Z569 592 aa11.26□□□□□ -0.61
SPARC-205ENST00000522348 LARGE2Q8N3Y3 721 aa11.26□□□□□ -0.61
SPARC-205ENST00000522348 NEDD1Q8NHV4 660 aa11.26□□□□□ -0.61
SPARC-205ENST00000522348 CTCFLQ8NI51 663 aaPredicted RBP11.26□□□□□ -0.61
SPARC-205ENST00000522348 SPATA32Q96LK8 384 aa11.26□□□□□ -0.61
SPARC-205ENST00000522348 MYL10Q9BUA6 226 aa11.26□□□□□ -0.61
SPARC-205ENST00000522348 SLC26A6Q9BXS9 759 aa11.26□□□□□ -0.61
SPARC-205ENST00000522348 KAT14Q9H8E8 782 aa11.26□□□□□ -0.61
SPARC-205ENST00000522348 GDPD2Q9HCC8 539 aa11.26□□□□□ -0.61
SPARC-205ENST00000522348 SWAP70Q9UH65 585 aa11.26□□□□□ -0.61
SPARC-205ENST00000522348 CD2APQ9Y5K6 639 aa11.26□□□□□ -0.61
SPARC-205ENST00000522348 SNED1Q8TER0 1413 aa11.26□□□□□ -0.61
SPARC-205ENST00000522348 SLX4Q8IY92 1834 aa11.25□□□□□ -0.61
SPARC-205ENST00000522348 GOLGA6L4A6NEF3 574 aa11.25□□□□□ -0.61
SPARC-205ENST00000522348 GOLGA6L3A6NEY3 463 aa11.25□□□□□ -0.61
SPARC-205ENST00000522348 FIBPO43427 364 aa11.25□□□□□ -0.61
SPARC-205ENST00000522348 GADD45BO75293 160 aaPredicted RBP11.25□□□□□ -0.61
SPARC-205ENST00000522348 WDHD1O75717 1129 aaPredicted RBP11.25□□□□□ -0.61
SPARC-205ENST00000522348 LETM1O95202 739 aaPredicted RBP11.25□□□□□ -0.61
SPARC-205ENST00000522348 HLA-DOAP06340 250 aa11.25□□□□□ -0.61
SPARC-205ENST00000522348 VIL1P09327 827 aaKnown RBP11.25□□□□□ -0.61
SPARC-205ENST00000522348 XBP1P17861 261 aa11.25□□□□□ -0.61
SPARC-205ENST00000522348 RASA1P20936 1047 aa11.25□□□□□ -0.61
SPARC-205ENST00000522348 RBM5P52756 815 aaKnown RBP eCLIP11.25□□□□□ -0.61
SPARC-205ENST00000522348 EVX2Q03828 476 aa11.25□□□□□ -0.61
SPARC-205ENST00000522348 PICALMQ13492 652 aa11.25□□□□□ -0.61
SPARC-205ENST00000522348 NBPF11Q86T75 865 aa11.25□□□□□ -0.61
SPARC-205ENST00000522348 KIAA0825Q8IV33 1275 aa11.25□□□□□ -0.61
SPARC-205ENST00000522348 PHKBQ93100 1093 aa11.25□□□□□ -0.61
SPARC-205ENST00000522348 IDI2Q9BXS1 227 aa11.25□□□□□ -0.61
SPARC-205ENST00000522348 RNF26Q9BY78 433 aaPredicted RBP11.25□□□□□ -0.61
SPARC-205ENST00000522348 DHX36Q9H2U1 1008 aaKnown RBP11.25□□□□□ -0.61
SPARC-205ENST00000522348 IL17RBQ9NRM6 502 aa11.25□□□□□ -0.61
SPARC-205ENST00000522348 TFIP11Q9UBB9 837 aaKnown RBP11.25□□□□□ -0.61
SPARC-205ENST00000522348 RCOR1Q9UKL0 485 aa11.25□□□□□ -0.61
SPARC-205ENST00000522348 ZNRF3Q9ULT6 936 aa11.25□□□□□ -0.61
SPARC-205ENST00000522348 PPFIA3O75145 1194 aa11.24□□□□□ -0.61
SPARC-205ENST00000522348 GNAQP50148 359 aa11.24□□□□□ -0.61
SPARC-205ENST00000522348 MMP14P50281 582 aa11.24□□□□□ -0.61
SPARC-205ENST00000522348 GUCY1B3Q02153 619 aa11.24□□□□□ -0.61
SPARC-205ENST00000522348 SAFBQ15424 915 aaKnown RBP eCLIP11.24□□□□□ -0.61
SPARC-205ENST00000522348 PPP4R3BQ5MIZ7 849 aa11.24□□□□□ -0.61
SPARC-205ENST00000522348 L1TD1Q5T7N2 865 aaKnown RBP11.24□□□□□ -0.61
SPARC-205ENST00000522348 KRT40Q6A162 431 aa11.24□□□□□ -0.61
SPARC-205ENST00000522348 RCSD1Q6JBY9 416 aa11.24□□□□□ -0.61
SPARC-205ENST00000522348 CAVIN1Q6NZI2 390 aaKnown RBP11.24□□□□□ -0.61
SPARC-205ENST00000522348 FAM173BQ6P4H8 233 aa11.24□□□□□ -0.61
SPARC-205ENST00000522348 RSBN1LQ6PCB5 846 aaPredicted RBP11.24□□□□□ -0.61
SPARC-205ENST00000522348 FOXP4Q8IVH2 680 aaPredicted RBP11.24□□□□□ -0.61
SPARC-205ENST00000522348 LEO1Q8WVC0 666 aaPredicted RBP11.24□□□□□ -0.61
SPARC-205ENST00000522348 LZTS2Q9BRK4 669 aa11.24□□□□□ -0.61
SPARC-205ENST00000522348 OSBPL5Q9H0X9 879 aaPredicted RBP11.24□□□□□ -0.61
SPARC-205ENST00000522348 RBM27Q9P2N5 1060 aaKnown RBP11.24□□□□□ -0.61
SPARC-205ENST00000522348 HDAC9Q9UKV0 1011 aa11.24□□□□□ -0.61
SPARC-205ENST00000522348 YDJCA8MPS7 323 aa11.23□□□□□ -0.61
SPARC-205ENST00000522348 NMT2O60551 498 aa11.23□□□□□ -0.61
SPARC-205ENST00000522348 FOSBP53539 338 aa11.23□□□□□ -0.61
SPARC-205ENST00000522348 ZNF445P59923 1031 aa11.23□□□□□ -0.61
SPARC-205ENST00000522348 GABPAQ06546 454 aa11.23□□□□□ -0.61
SPARC-205ENST00000522348 GNL2Q13823 731 aaKnown RBP11.23□□□□□ -0.61
SPARC-205ENST00000522348 GPR162Q16538 588 aa11.23□□□□□ -0.61
SPARC-205ENST00000522348 SLC4A8Q2Y0W8 1093 aa11.23□□□□□ -0.61
SPARC-205ENST00000522348 OTUD7BQ6GQQ9 843 aa11.23□□□□□ -0.61
SPARC-205ENST00000522348 NIM1KQ8IY84 436 aa11.23□□□□□ -0.61
SPARC-205ENST00000522348 OGFOD1Q8N543 542 aa11.23□□□□□ -0.61
SPARC-205ENST00000522348 AGBL3Q8NEM8 1001 aa11.23□□□□□ -0.61
SPARC-205ENST00000522348 EHD4Q9H223 541 aa11.23□□□□□ -0.61
SPARC-205ENST00000522348 DDX4Q9NQI0 724 aaKnown RBP11.23□□□□□ -0.61
SPARC-205ENST00000522348 ZNF277Q9NRM2 450 aaPredicted RBP11.23□□□□□ -0.61
SPARC-205ENST00000522348 SERPINB13Q9UIV8 391 aa11.23□□□□□ -0.61
SPARC-205ENST00000522348 ENTPD3O75355 529 aa11.22□□□□□ -0.61
SPARC-205ENST00000522348 TOP1P11387 765 aaKnown RBP11.22□□□□□ -0.61
SPARC-205ENST00000522348 U2AF2P26368 475 aaKnown RBP eCLIP11.22□□□□□ -0.61
SPARC-205ENST00000522348 KIF23Q02241 960 aaPredicted RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms