RNA–Protein interactions for RNA: ENST00000522052.5

CTNNA1-233, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-233ENST00000522052 KLHL6Q8WZ60 621 aa7.12□□□□□ -1.27
CTNNA1-233ENST00000522052 SPATA9Q9BWV2 254 aa7.12□□□□□ -1.27
CTNNA1-233ENST00000522052 RAD18Q9NS91 495 aa7.12□□□□□ -1.27
CTNNA1-233ENST00000522052 FAM86C2PA6NEL3 165 aa7.11□□□□□ -1.27
CTNNA1-233ENST00000522052 OIP5O43482 229 aa7.11□□□□□ -1.27
CTNNA1-233ENST00000522052 YARSP54577 528 aaKnown RBP7.11□□□□□ -1.27
CTNNA1-233ENST00000522052 COL9A3Q14050 684 aaPredicted RBP7.11□□□□□ -1.27
CTNNA1-233ENST00000522052 SLC10A6Q3KNW5 377 aa7.11□□□□□ -1.27
CTNNA1-233ENST00000522052 FOXD4L6Q3SYB3 417 aaPredicted RBP7.11□□□□□ -1.27
CTNNA1-233ENST00000522052 GNPTABQ3T906 1256 aa7.11□□□□□ -1.27
CTNNA1-233ENST00000522052 TMEM67Q5HYA8 995 aa7.11□□□□□ -1.27
CTNNA1-233ENST00000522052 EXOSC6Q5RKV6 272 aaKnown RBP7.11□□□□□ -1.27
CTNNA1-233ENST00000522052 ZBTB37Q5TC79 503 aa7.11□□□□□ -1.27
CTNNA1-233ENST00000522052 FOXD4L3Q6VB84 417 aaPredicted RBP7.11□□□□□ -1.27
CTNNA1-233ENST00000522052 MCATQ8IVS2 390 aaKnown RBP7.11□□□□□ -1.27
CTNNA1-233ENST00000522052 SLFN12Q8IYM2 578 aa7.11□□□□□ -1.27
CTNNA1-233ENST00000522052 LRRC47Q8N1G4 583 aaKnown RBP7.11□□□□□ -1.27
CTNNA1-233ENST00000522052 FAM13CQ8NE31 585 aa7.11□□□□□ -1.27
CTNNA1-233ENST00000522052 PICK1Q9NRD5 415 aa7.11□□□□□ -1.27
CTNNA1-233ENST00000522052 LRRC4BQ9NT99 713 aa7.11□□□□□ -1.27
CTNNA1-233ENST00000522052 KCNK4Q9NYG8 393 aa7.11□□□□□ -1.27
CTNNA1-233ENST00000522052 TJP2Q9UDY2 1190 aa7.11□□□□□ -1.27
CTNNA1-233ENST00000522052 IQCA1LA6NCM1 817 aa7.1□□□□□ -1.27
CTNNA1-233ENST00000522052 TMPRSS2O15393 492 aa7.1□□□□□ -1.27
CTNNA1-233ENST00000522052 DEAF1O75398 565 aaPredicted RBP7.1□□□□□ -1.27
CTNNA1-233ENST00000522052 ASMTLO95671 621 aa7.1□□□□□ -1.27
CTNNA1-233ENST00000522052 FAM153BP0C7A2 387 aa7.1□□□□□ -1.27
CTNNA1-233ENST00000522052 MASP1P48740 699 aa7.1□□□□□ -1.27
CTNNA1-233ENST00000522052 KRT76Q01546 638 aa7.1□□□□□ -1.27
CTNNA1-233ENST00000522052 ZC3H12BQ5HYM0 836 aaKnown RBP7.1□□□□□ -1.27
CTNNA1-233ENST00000522052 SLC6A19Q695T7 634 aa7.1□□□□□ -1.27
CTNNA1-233ENST00000522052 MRPL41Q8IXM3 137 aaKnown RBP7.1□□□□□ -1.27
CTNNA1-233ENST00000522052 DTWD1Q8N5C7 304 aa7.1□□□□□ -1.27
CTNNA1-233ENST00000522052 ZNF507Q8TCN5 953 aa7.1□□□□□ -1.27
CTNNA1-233ENST00000522052 TMEM87BQ96K49 555 aa7.1□□□□□ -1.27
CTNNA1-233ENST00000522052 SLC26A8Q96RN1 970 aa7.1□□□□□ -1.27
CTNNA1-233ENST00000522052 CRIM1Q9NZV1 1036 aa7.1□□□□□ -1.27
CTNNA1-233ENST00000522052 PPP1R9AQ9ULJ8 1098 aa7.1□□□□□ -1.27
CTNNA1-233ENST00000522052 SHISA8B8ZZ34 492 aa7.09□□□□□ -1.27
CTNNA1-233ENST00000522052 RGS13O14921 159 aa7.09□□□□□ -1.27
CTNNA1-233ENST00000522052 ADCY3O60266 1144 aa7.09□□□□□ -1.27
CTNNA1-233ENST00000522052 POLR2BP30876 1174 aaKnown RBP7.09□□□□□ -1.27
CTNNA1-233ENST00000522052 BBS9Q3SYG4 887 aa7.09□□□□□ -1.27
CTNNA1-233ENST00000522052 HID1Q8IV36 788 aa7.09□□□□□ -1.27
CTNNA1-233ENST00000522052 ZBTB38Q8NAP3 1195 aaPredicted RBP7.09□□□□□ -1.27
CTNNA1-233ENST00000522052 RNF214Q8ND24 703 aa7.09□□□□□ -1.27
CTNNA1-233ENST00000522052 UBASH3BQ8TF42 649 aa7.09□□□□□ -1.27
CTNNA1-233ENST00000522052 SGSM3Q96HU1 749 aa7.09□□□□□ -1.27
CTNNA1-233ENST00000522052 DHRS1Q96LJ7 313 aa7.09□□□□□ -1.27
CTNNA1-233ENST00000522052 PLAAQ9Y263 795 aa7.09□□□□□ -1.27
CTNNA1-233ENST00000522052 CD2APQ9Y5K6 639 aa7.09□□□□□ -1.27
CTNNA1-233ENST00000522052 ERBB4Q15303 1308 aa7.08□□□□□ -1.28
CTNNA1-233ENST00000522052 BCRP11274 1271 aa7.08□□□□□ -1.28
CTNNA1-233ENST00000522052 AMPD1P23109 780 aa7.08□□□□□ -1.28
CTNNA1-233ENST00000522052 NTF4P34130 210 aa7.08□□□□□ -1.28
CTNNA1-233ENST00000522052 ZNF143P52747 638 aaPredicted RBP7.08□□□□□ -1.28
CTNNA1-233ENST00000522052 PMS1P54277 932 aaKnown RBP7.08□□□□□ -1.28
CTNNA1-233ENST00000522052 AMPD3Q01432 767 aa7.08□□□□□ -1.28
CTNNA1-233ENST00000522052 DALRD3Q5D0E6 543 aaKnown RBP7.08□□□□□ -1.28
CTNNA1-233ENST00000522052 PHACTR4Q8IZ21 702 aa7.08□□□□□ -1.28
CTNNA1-233ENST00000522052 TMPRSS13Q9BYE2 586 aa7.08□□□□□ -1.28
CTNNA1-233ENST00000522052 METTL14Q9HCE5 456 aaKnown RBP7.08□□□□□ -1.28
CTNNA1-233ENST00000522052 DISC1Q9NRI5 854 aa7.08□□□□□ -1.28
CTNNA1-233ENST00000522052 SUCOQ9UBS9 1254 aaKnown RBP7.08□□□□□ -1.28
CTNNA1-233ENST00000522052 CCDC163A0A0D9SF12 145 aa7.07□□□□□ -1.28
CTNNA1-233ENST00000522052 MEGF11A6BM72 1044 aa7.07□□□□□ -1.28
CTNNA1-233ENST00000522052 AGRPO00253 132 aa7.07□□□□□ -1.28
CTNNA1-233ENST00000522052 VIL1P09327 827 aaKnown RBP7.07□□□□□ -1.28
CTNNA1-233ENST00000522052 SLURP2P0DP57 97 aa7.07□□□□□ -1.28
CTNNA1-233ENST00000522052 DUOXA2Q1HG44 320 aa7.07□□□□□ -1.28
CTNNA1-233ENST00000522052 AKAP4Q5JQC9 854 aa7.07□□□□□ -1.28
CTNNA1-233ENST00000522052 FBXO11Q86XK2 927 aa7.07□□□□□ -1.28
CTNNA1-233ENST00000522052 TMEM192Q8IY95 271 aa7.07□□□□□ -1.28
CTNNA1-233ENST00000522052 RPUSD2Q8IZ73 545 aaKnown RBP7.07□□□□□ -1.28
CTNNA1-233ENST00000522052 SLC16A10Q8TF71 515 aa7.07□□□□□ -1.28
CTNNA1-233ENST00000522052 CCDC74BQ96LY2 380 aa7.07□□□□□ -1.28
CTNNA1-233ENST00000522052 SLC6A18Q96N87 628 aa7.07□□□□□ -1.28
CTNNA1-233ENST00000522052 FANCD2OSQ96PS1 177 aa7.07□□□□□ -1.28
CTNNA1-233ENST00000522052 KIF2CQ99661 725 aa7.07□□□□□ -1.28
CTNNA1-233ENST00000522052 RUSC1Q9BVN2 902 aa7.07□□□□□ -1.28
CTNNA1-233ENST00000522052 ATXN3LQ9H3M9 355 aa7.07□□□□□ -1.28
CTNNA1-233ENST00000522052 FBRSQ9HAH7 460 aa7.07□□□□□ -1.28
CTNNA1-233ENST00000522052 CWC22Q9HCG8 908 aaKnown RBP7.07□□□□□ -1.28
CTNNA1-233ENST00000522052 DLL1O00548 723 aa7.06□□□□□ -1.28
CTNNA1-233ENST00000522052 TERTO14746 1132 aaKnown RBP7.06□□□□□ -1.28
CTNNA1-233ENST00000522052 UBOX5O94941 541 aa7.06□□□□□ -1.28
CTNNA1-233ENST00000522052 NAT2P11245 290 aa7.06□□□□□ -1.28
CTNNA1-233ENST00000522052 TRAPPC3LQ5T215 181 aa7.06□□□□□ -1.28
CTNNA1-233ENST00000522052 PPFIBP1Q86W92 1011 aa7.06□□□□□ -1.28
CTNNA1-233ENST00000522052 KCT2Q8NC54 265 aa7.06□□□□□ -1.28
CTNNA1-233ENST00000522052 IRF7Q92985 503 aa7.06□□□□□ -1.28
CTNNA1-233ENST00000522052 ANKRD34BA5PLL1 514 aa7.05□□□□□ -1.28
CTNNA1-233ENST00000522052 HCLS1P14317 486 aaPredicted RBP7.05□□□□□ -1.28
CTNNA1-233ENST00000522052 GBP1P32455 592 aa7.05□□□□□ -1.28
CTNNA1-233ENST00000522052 CAP2P40123 477 aa7.05□□□□□ -1.28
CTNNA1-233ENST00000522052 DGKGP49619 791 aa7.05□□□□□ -1.28
CTNNA1-233ENST00000522052 SLBPQ14493 270 aaKnown RBP eCLIP7.05□□□□□ -1.28
CTNNA1-233ENST00000522052 NKG7Q16617 165 aa7.05□□□□□ -1.28
CTNNA1-233ENST00000522052 SV2CQ496J9 727 aa7.05□□□□□ -1.28
CTNNA1-233ENST00000522052 CDC37L1Q7L3B6 337 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms