RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 ANGEL1Q9UNK9 670 aaKnown RBP25.15■■□□□ 1.62
R3HCC1-208ENST00000522012 TSPY3P0CV98 308 aa25.14■■□□□ 1.62
R3HCC1-208ENST00000522012 TSPY8P0CW00 308 aa25.14■■□□□ 1.62
R3HCC1-208ENST00000522012 ZSCAN10Q96SZ4 725 aaPredicted RBP25.14■■□□□ 1.62
R3HCC1-208ENST00000522012 GGA3Q9NZ52 723 aa25.14■■□□□ 1.62
R3HCC1-208ENST00000522012 FAM196BA6NMK8 535 aa25.13■■□□□ 1.61
R3HCC1-208ENST00000522012 HSP90AA1P07900 732 aaKnown RBP25.13■■□□□ 1.61
R3HCC1-208ENST00000522012 APOBEC3FQ8IUX4 373 aaKnown RBP25.13■■□□□ 1.61
R3HCC1-208ENST00000522012 MTA3Q9BTC8 594 aa25.13■■□□□ 1.61
R3HCC1-208ENST00000522012 NAP1L2Q9ULW6 460 aaPredicted RBP25.13■■□□□ 1.61
R3HCC1-208ENST00000522012 SHMT1P34896 483 aa25.12■■□□□ 1.61
R3HCC1-208ENST00000522012 EPHX2P34913 555 aa25.12■■□□□ 1.61
R3HCC1-208ENST00000522012 WTAPQ15007 396 aa25.12■■□□□ 1.61
R3HCC1-208ENST00000522012 NFXL1Q6ZNB6 911 aa25.12■■□□□ 1.61
R3HCC1-208ENST00000522012 DEFB129Q9H1M3 183 aa25.12■■□□□ 1.61
R3HCC1-208ENST00000522012 MYH1P12882 1939 aa25.12■■□□□ 1.61
R3HCC1-208ENST00000522012 TNKSO95271 1327 aa25.12■■□□□ 1.61
R3HCC1-208ENST00000522012 LARGE1O95461 756 aa25.12■■□□□ 1.61
R3HCC1-208ENST00000522012 ME3Q16798 604 aa25.12■■□□□ 1.61
R3HCC1-208ENST00000522012 CDAN1Q8IWY9 1227 aa25.12■■□□□ 1.61
R3HCC1-208ENST00000522012 DNAJC18Q9H819 358 aa25.12■■□□□ 1.61
R3HCC1-208ENST00000522012 LY9Q9HBG7 655 aa25.12■■□□□ 1.61
R3HCC1-208ENST00000522012 SH2B1Q9NRF2 756 aaPredicted RBP25.12■■□□□ 1.61
R3HCC1-208ENST00000522012 TAOK2Q9UL54 1235 aa25.12■■□□□ 1.61
R3HCC1-208ENST00000522012 IQCA1LA6NCM1 817 aa25.11■■□□□ 1.61
R3HCC1-208ENST00000522012 NMT2O60551 498 aa25.11■■□□□ 1.61
R3HCC1-208ENST00000522012 STK3Q13188 491 aa25.11■■□□□ 1.61
R3HCC1-208ENST00000522012 USP50Q70EL3 339 aaPredicted RBP25.11■■□□□ 1.61
R3HCC1-208ENST00000522012 METTL16Q86W50 562 aaKnown RBP25.11■■□□□ 1.61
R3HCC1-208ENST00000522012 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.11■■□□□ 1.61
R3HCC1-208ENST00000522012 SENP2Q9HC62 589 aa25.11■■□□□ 1.61
R3HCC1-208ENST00000522012 FOXD4L1Q9NU39 408 aa25.11■■□□□ 1.61
R3HCC1-208ENST00000522012 PGAP2Q9UHJ9 254 aa25.11■■□□□ 1.61
R3HCC1-208ENST00000522012 HERC5Q9UII4 1024 aaKnown RBP25.11■■□□□ 1.61
R3HCC1-208ENST00000522012 KLF18A0A0U1RQI7 1052 aa25.1■■□□□ 1.61
R3HCC1-208ENST00000522012 LIFRP42702 1097 aa25.1■■□□□ 1.61
R3HCC1-208ENST00000522012 TMTC2Q8N394 836 aa25.1■■□□□ 1.61
R3HCC1-208ENST00000522012 BRPF3Q9ULD4 1205 aa25.1■■□□□ 1.61
R3HCC1-208ENST00000522012 CCDC69A6NI79 296 aa25.09■■□□□ 1.61
R3HCC1-208ENST00000522012 SEC23AQ15436 765 aa25.09■■□□□ 1.61
R3HCC1-208ENST00000522012 ENAHQ8N8S7 591 aaPredicted RBP25.09■■□□□ 1.61
R3HCC1-208ENST00000522012 NECAB1Q8N987 351 aa25.09■■□□□ 1.61
R3HCC1-208ENST00000522012 NEDD1Q8NHV4 660 aa25.09■■□□□ 1.61
R3HCC1-208ENST00000522012 GPBP1L1Q9HC44 474 aaPredicted RBP25.09■■□□□ 1.61
R3HCC1-208ENST00000522012 MPHOSPH10O00566 681 aaKnown RBP25.08■■□□□ 1.61
R3HCC1-208ENST00000522012 AKR1B1P15121 316 aa25.08■■□□□ 1.61
R3HCC1-208ENST00000522012 CERKLQ49MI3 558 aaPredicted RBP25.08■■□□□ 1.61
R3HCC1-208ENST00000522012 CCDC178Q5BJE1 867 aa25.08■■□□□ 1.61
R3HCC1-208ENST00000522012 IFIT1BQ5T764 474 aaKnown RBP25.08■■□□□ 1.61
R3HCC1-208ENST00000522012 MIGA2Q7L4E1 593 aa25.08■■□□□ 1.61
R3HCC1-208ENST00000522012 DCPSQ96C86 337 aaKnown RBP25.08■■□□□ 1.61
R3HCC1-208ENST00000522012 ZNF274Q96GC6 653 aaPredicted RBP25.08■■□□□ 1.61
R3HCC1-208ENST00000522012 CCDC17Q96LX7 622 aa25.08■■□□□ 1.61
R3HCC1-208ENST00000522012 TEPSINQ96N21 525 aa25.08■■□□□ 1.61
R3HCC1-208ENST00000522012 SLKQ9H2G2 1235 aaPredicted RBP25.08■■□□□ 1.61
R3HCC1-208ENST00000522012 TAF1DQ9H5J8 278 aaPredicted RBP25.08■■□□□ 1.61
R3HCC1-208ENST00000522012 IL17RBQ9NRM6 502 aa25.08■■□□□ 1.61
R3HCC1-208ENST00000522012 TCP11L1Q9NUJ3 509 aa25.08■■□□□ 1.61
R3HCC1-208ENST00000522012 PDIA3P30101 505 aaKnown RBP25.07■■□□□ 1.6
R3HCC1-208ENST00000522012 EVCP57679 992 aa25.07■■□□□ 1.6
R3HCC1-208ENST00000522012 CUL4AQ13619 759 aa25.07■■□□□ 1.6
R3HCC1-208ENST00000522012 TATDN1Q6P1N9 297 aa25.07■■□□□ 1.6
R3HCC1-208ENST00000522012 SGMS1Q86VZ5 419 aa25.07■■□□□ 1.6
R3HCC1-208ENST00000522012 CCDC83Q8IWF9 413 aa25.07■■□□□ 1.6
R3HCC1-208ENST00000522012 PITPNM2Q9BZ72 1349 aa25.07■■□□□ 1.6
R3HCC1-208ENST00000522012 POTECB2RU33 542 aa25.07■■□□□ 1.6
R3HCC1-208ENST00000522012 EAPPQ56P03 285 aaPredicted RBP25.07■■□□□ 1.6
R3HCC1-208ENST00000522012 SYNE3Q6ZMZ3 975 aa25.07■■□□□ 1.6
R3HCC1-208ENST00000522012 SLC12A7Q9Y666 1083 aa25.07■■□□□ 1.6
R3HCC1-208ENST00000522012 GOLGA8BA8MQT2 603 aa25.06■■□□□ 1.6
R3HCC1-208ENST00000522012 TBC1D12O60347 775 aa25.06■■□□□ 1.6
R3HCC1-208ENST00000522012 PRAMEF18Q5VWM3 479 aa25.06■■□□□ 1.6
R3HCC1-208ENST00000522012 RAB11FIP4Q86YS3 637 aa25.06■■□□□ 1.6
R3HCC1-208ENST00000522012 PFKFB2O60825 505 aa25.05■■□□□ 1.6
R3HCC1-208ENST00000522012 NBPF12Q5TAG4 269 aaPredicted RBP25.05■■□□□ 1.6
R3HCC1-208ENST00000522012 DGKHQ86XP1 1220 aa25.05■■□□□ 1.6
R3HCC1-208ENST00000522012 PPP2R3BQ9Y5P8 575 aa25.05■■□□□ 1.6
R3HCC1-208ENST00000522012 CCT2P78371 535 aaKnown RBP25.04■■□□□ 1.6
R3HCC1-208ENST00000522012 APOA5Q6Q788 366 aa25.04■■□□□ 1.6
R3HCC1-208ENST00000522012 SULF1Q8IWU6 871 aa25.04■■□□□ 1.6
R3HCC1-208ENST00000522012 ZC3H15Q8WU90 426 aaKnown RBP25.04■■□□□ 1.6
R3HCC1-208ENST00000522012 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.04■■□□□ 1.6
R3HCC1-208ENST00000522012 STX8Q9UNK0 236 aa25.04■■□□□ 1.6
R3HCC1-208ENST00000522012 GDF11O95390 407 aa25.03■■□□□ 1.6
R3HCC1-208ENST00000522012 ABCB5Q2M3G0 1257 aa25.03■■□□□ 1.6
R3HCC1-208ENST00000522012 RCSD1Q6JBY9 416 aa25.03■■□□□ 1.6
R3HCC1-208ENST00000522012 PNMA8AQ86V59 439 aaPredicted RBP25.03■■□□□ 1.6
R3HCC1-208ENST00000522012 GTF3C6Q969F1 213 aa25.03■■□□□ 1.6
R3HCC1-208ENST00000522012 CEP95Q96GE4 821 aa25.03■■□□□ 1.6
R3HCC1-208ENST00000522012 MYL10Q9BUA6 226 aa25.03■■□□□ 1.6
R3HCC1-208ENST00000522012 ZBTB43O43298 467 aa25.02■■□□□ 1.6
R3HCC1-208ENST00000522012 MAP3K10Q02779 954 aa25.02■■□□□ 1.6
R3HCC1-208ENST00000522012 ST3GAL1Q11201 340 aa25.02■■□□□ 1.6
R3HCC1-208ENST00000522012 SCRN1Q12765 414 aa25.02■■□□□ 1.6
R3HCC1-208ENST00000522012 RRP1BQ14684 758 aaKnown RBP25.02■■□□□ 1.6
R3HCC1-208ENST00000522012 CATIPQ7Z7H3 387 aa25.02■■□□□ 1.6
R3HCC1-208ENST00000522012 MICU3Q86XE3 530 aa25.02■■□□□ 1.6
R3HCC1-208ENST00000522012 ZNF654Q8IZM8 581 aa25.02■■□□□ 1.6
R3HCC1-208ENST00000522012 ANKS1AQ92625 1134 aa25.02■■□□□ 1.6
R3HCC1-208ENST00000522012 HOOK2Q96ED9 719 aa25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms