RNA–Protein interactions for RNA: ENST00000521067.1

PABPC1-217, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-217ENST00000521067 IGSF3O75054 1194 aa24.79■■□□□ 1.56
PABPC1-217ENST00000521067 IDH1O75874 414 aaKnown RBP24.79■■□□□ 1.56
PABPC1-217ENST00000521067 ASNSP08243 561 aa24.79■■□□□ 1.56
PABPC1-217ENST00000521067 PABPC4Q13310 644 aaKnown RBP eCLIP24.79■■□□□ 1.561e-323■■■■■ 64.9
PABPC1-217ENST00000521067 MIGA1Q8NAN2 632 aa24.79■■□□□ 1.56
PABPC1-217ENST00000521067 HOXA7P31268 230 aaPredicted RBP24.78■■□□□ 1.56
PABPC1-217ENST00000521067 CRACR2BQ8N4Y2 399 aaPredicted RBP24.78■■□□□ 1.56
PABPC1-217ENST00000521067 DEFB118Q96PH6 123 aa24.78■■□□□ 1.56
PABPC1-217ENST00000521067 PAK6Q9NQU5 681 aaPredicted RBP24.78■■□□□ 1.56
PABPC1-217ENST00000521067 LOC285556D6RIA3 1793 aa24.77■■□□□ 1.56
PABPC1-217ENST00000521067 MAGEB6Q8N7X4 407 aa24.77■■□□□ 1.56
PABPC1-217ENST00000521067 TXNRD2Q9NNW7 524 aa24.77■■□□□ 1.56
PABPC1-217ENST00000521067 MORF4L1Q9UBU8 362 aa24.77■■□□□ 1.56
PABPC1-217ENST00000521067 ZBTB21Q9ULJ3 1066 aa24.77■■□□□ 1.56
PABPC1-217ENST00000521067 ATAD5Q96QE3 1844 aa24.77■■□□□ 1.56
PABPC1-217ENST00000521067 FARP2O94887 1054 aaPredicted RBP24.76■■□□□ 1.55
PABPC1-217ENST00000521067 POTEEQ6S8J3 1075 aa24.76■■□□□ 1.55
PABPC1-217ENST00000521067 CHRDL2Q6WN34 429 aa24.76■■□□□ 1.55
PABPC1-217ENST00000521067 USP17L10C9JJH3 530 aa24.75■■□□□ 1.55
PABPC1-217ENST00000521067 TFRCP02786 760 aaKnown RBP24.75■■□□□ 1.55
PABPC1-217ENST00000521067 TRIM32Q13049 653 aa24.75■■□□□ 1.55
PABPC1-217ENST00000521067 DIEXFQ68CQ4 756 aaKnown RBP24.75■■□□□ 1.55
PABPC1-217ENST00000521067 AACSQ86V21 672 aa24.75■■□□□ 1.55
PABPC1-217ENST00000521067 CRISPLD2Q9H0B8 497 aa24.75■■□□□ 1.55
PABPC1-217ENST00000521067 EMILIN3Q9NT22 766 aa24.75■■□□□ 1.55
PABPC1-217ENST00000521067 TMOD4Q9NZQ9 345 aa24.75■■□□□ 1.55
PABPC1-217ENST00000521067 MAST2Q6P0Q8 1798 aa24.75■■□□□ 1.55
PABPC1-217ENST00000521067 C19orf81C9J6K1 198 aa24.74■■□□□ 1.55
PABPC1-217ENST00000521067 Q3C1V9 767 aa24.74■■□□□ 1.55
PABPC1-217ENST00000521067 HTATIP2Q9BUP3 242 aa24.74■■□□□ 1.55
PABPC1-217ENST00000521067 TRIM34Q9BYJ4 488 aa24.74■■□□□ 1.55
PABPC1-217ENST00000521067 IL1RAPL2Q9NP60 686 aa24.74■■□□□ 1.55
PABPC1-217ENST00000521067 GINM1Q9NU53 330 aa24.74■■□□□ 1.55
PABPC1-217ENST00000521067 RBPJLQ9UBG7 517 aa24.74■■□□□ 1.55
PABPC1-217ENST00000521067 CDK5RAP2Q96SN8 1893 aa24.73■■□□□ 1.55
PABPC1-217ENST00000521067 GH2P01242 217 aa24.73■■□□□ 1.55
PABPC1-217ENST00000521067 HLA-DOAP06340 250 aa24.73■■□□□ 1.55
PABPC1-217ENST00000521067 HERVK_113P62684 666 aa24.73■■□□□ 1.55
PABPC1-217ENST00000521067 IRX3P78415 501 aaPredicted RBP24.73■■□□□ 1.55
PABPC1-217ENST00000521067 TATDN1Q6P1N9 297 aa24.73■■□□□ 1.55
PABPC1-217ENST00000521067 ZBED9Q6R2W3 1325 aa24.72■■□□□ 1.55
PABPC1-217ENST00000521067 USP5P45974 858 aa24.72■■□□□ 1.55
PABPC1-217ENST00000521067 RBM27Q9P2N5 1060 aaKnown RBP24.72■■□□□ 1.55
PABPC1-217ENST00000521067 MAP3K12Q12852 859 aa24.71■■□□□ 1.55
PABPC1-217ENST00000521067 ERC1Q8IUD2 1116 aa24.71■■□□□ 1.55
PABPC1-217ENST00000521067 RHPN1Q8TCX5 695 aa24.71■■□□□ 1.55
PABPC1-217ENST00000521067 RIOK1Q9BRS2 568 aaKnown RBP24.71■■□□□ 1.55
PABPC1-217ENST00000521067 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.71■■□□□ 1.55
PABPC1-217ENST00000521067 FOCADQ5VW36 1801 aa24.7■■□□□ 1.55
PABPC1-217ENST00000521067 HMGCRP04035 888 aa24.7■■□□□ 1.54
PABPC1-217ENST00000521067 PLCD1P51178 756 aa24.7■■□□□ 1.54
PABPC1-217ENST00000521067 SIRT2Q8IXJ6 389 aa24.7■■□□□ 1.54
PABPC1-217ENST00000521067 GPRC5AQ8NFJ5 357 aa24.7■■□□□ 1.54
PABPC1-217ENST00000521067 PAWRQ96IZ0 340 aaKnown RBP24.7■■□□□ 1.54
PABPC1-217ENST00000521067 PRO3102Q9H379 93 aa24.7■■□□□ 1.54
PABPC1-217ENST00000521067 CYP2B6P20813 491 aa24.69■■□□□ 1.54
PABPC1-217ENST00000521067 EVX2Q03828 476 aa24.69■■□□□ 1.54
PABPC1-217ENST00000521067 USP17L2Q6R6M4 530 aa24.69■■□□□ 1.54
PABPC1-217ENST00000521067 DIS3LQ8TF46 1054 aaKnown RBP24.69■■□□□ 1.54
PABPC1-217ENST00000521067 TRIB2Q92519 343 aa24.69■■□□□ 1.54
PABPC1-217ENST00000521067 EHD4Q9H223 541 aa24.69■■□□□ 1.54
PABPC1-217ENST00000521067 PORCNQ9H237 461 aa24.69■■□□□ 1.54
PABPC1-217ENST00000521067 SERPINB13Q9UIV8 391 aa24.69■■□□□ 1.54
PABPC1-217ENST00000521067 LAMA3Q16787 3333 aa24.69■■□□□ 1.54
PABPC1-217ENST00000521067 CERS3Q8IU89 383 aa24.68■■□□□ 1.54
PABPC1-217ENST00000521067 ACER1Q8TDN7 264 aa24.68■■□□□ 1.54
PABPC1-217ENST00000521067 RPTORQ8N122 1335 aa24.67■■□□□ 1.54
PABPC1-217ENST00000521067 APBB1O00213 710 aa24.67■■□□□ 1.54
PABPC1-217ENST00000521067 CAPN2P17655 700 aa24.67■■□□□ 1.54
PABPC1-217ENST00000521067 MNX1P50219 401 aaPredicted RBP24.67■■□□□ 1.54
PABPC1-217ENST00000521067 ERVK-9P63128 1117 aa24.67■■□□□ 1.54
PABPC1-217ENST00000521067 ERVK-24P63145 666 aa24.67■■□□□ 1.54
PABPC1-217ENST00000521067 ZYXQ15942 572 aaKnown RBP24.67■■□□□ 1.54
PABPC1-217ENST00000521067 NR2E3Q9Y5X4 410 aa24.67■■□□□ 1.54
PABPC1-217ENST00000521067 PLXNB2O15031 1838 aa24.66■■□□□ 1.54
PABPC1-217ENST00000521067 SHMT1P34896 483 aa24.66■■□□□ 1.54
PABPC1-217ENST00000521067 CERKLQ49MI3 558 aaPredicted RBP24.66■■□□□ 1.54
PABPC1-217ENST00000521067 MAP3K21Q5TCX8 1036 aa24.66■■□□□ 1.54
PABPC1-217ENST00000521067 TTC6Q86TZ1 520 aa24.66■■□□□ 1.54
PABPC1-217ENST00000521067 USP6NLQ92738 828 aa24.66■■□□□ 1.54
PABPC1-217ENST00000521067 C12orf42Q96LP6 360 aa24.66■■□□□ 1.54
PABPC1-217ENST00000521067 HMX1Q9NP08 348 aaPredicted RBP24.66■■□□□ 1.54
PABPC1-217ENST00000521067 CNMDO75829 334 aa24.65■■□□□ 1.54
PABPC1-217ENST00000521067 PDE6AP16499 860 aa24.65■■□□□ 1.54
PABPC1-217ENST00000521067 GUCY1A2P33402 732 aa24.65■■□□□ 1.54
PABPC1-217ENST00000521067 RAB3GAP1Q15042 981 aa24.65■■□□□ 1.54
PABPC1-217ENST00000521067 HSP90AB4PQ58FF6 505 aa24.65■■□□□ 1.54
PABPC1-217ENST00000521067 SLC9C2Q5TAH2 1124 aa24.65■■□□□ 1.54
PABPC1-217ENST00000521067 TMED8Q6PL24 325 aaPredicted RBP24.65■■□□□ 1.54
PABPC1-217ENST00000521067 EDC3Q96F86 508 aaKnown RBP24.65■■□□□ 1.54
PABPC1-217ENST00000521067 NUDT12Q9BQG2 462 aa24.65■■□□□ 1.54
PABPC1-217ENST00000521067 PAGR1Q9BTK6 254 aa24.65■■□□□ 1.54
PABPC1-217ENST00000521067 ZBTB40Q9NUA8 1239 aa24.65■■□□□ 1.54
PABPC1-217ENST00000521067 COG6Q9Y2V7 657 aa24.65■■□□□ 1.54
PABPC1-217ENST00000521067 MAGEB6P1A0A0J9YX57 407 aa24.64■■□□□ 1.54
PABPC1-217ENST00000521067 TCRBV5S4A2TA0A5A2 114 aa24.64■■□□□ 1.54
PABPC1-217ENST00000521067 EVI5O60447 810 aa24.64■■□□□ 1.54
PABPC1-217ENST00000521067 XRCC5P13010 732 aaKnown RBP24.64■■□□□ 1.54
PABPC1-217ENST00000521067 GABPAQ06546 454 aa24.64■■□□□ 1.54
PABPC1-217ENST00000521067 ABCB5Q2M3G0 1257 aa24.64■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms