RNA–Protein interactions for RNA: ENST00000520909.5

CLK4-207, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,305 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-207ENST00000520909 LRFN4Q6PJG9 635 aa8.03□□□□□ -1.12
CLK4-207ENST00000520909 CILP2Q8IUL8 1156 aa8.03□□□□□ -1.12
CLK4-207ENST00000520909 ZSCAN29Q8IWY8 852 aaPredicted RBP8.03□□□□□ -1.12
CLK4-207ENST00000520909 H3BS24 57 aa8.02□□□□□ -1.13
CLK4-207ENST00000520909 ETF1P62495 437 aaKnown RBP8.02□□□□□ -1.13
CLK4-207ENST00000520909 FGD1P98174 961 aa8.02□□□□□ -1.13
CLK4-207ENST00000520909 SLBPQ14493 270 aaKnown RBP eCLIP8.02□□□□□ -1.13
CLK4-207ENST00000520909 ZNF746Q6NUN9 644 aaPredicted RBP8.02□□□□□ -1.13
CLK4-207ENST00000520909 WNT10AQ9GZT5 417 aa8.02□□□□□ -1.13
CLK4-207ENST00000520909 FBRSQ9HAH7 460 aa8.02□□□□□ -1.13
CLK4-207ENST00000520909 CNTNAP4Q9C0A0 1308 aa8.01□□□□□ -1.13
CLK4-207ENST00000520909 CAP2P40123 477 aa8.01□□□□□ -1.13
CLK4-207ENST00000520909 PTPN11Q06124 597 aaPredicted RBP8.01□□□□□ -1.13
CLK4-207ENST00000520909 LRRC56Q8IYG6 542 aaPredicted RBP8.01□□□□□ -1.13
CLK4-207ENST00000520909 PLPPR2Q96GM1 343 aa8.01□□□□□ -1.13
CLK4-207ENST00000520909 KRTAP17-1Q9BYP8 105 aa8.01□□□□□ -1.13
CLK4-207ENST00000520909 C19orf73Q9NVV2 129 aa8.01□□□□□ -1.13
CLK4-207ENST00000520909 SPG7Q9UQ90 795 aa8.01□□□□□ -1.13
CLK4-207ENST00000520909 SNCAIPQ9Y6H5 919 aa8.01□□□□□ -1.13
CLK4-207ENST00000520909 CAPN6Q9Y6Q1 641 aa8.01□□□□□ -1.13
CLK4-207ENST00000520909 NFIBO00712 420 aa8□□□□□ -1.13
CLK4-207ENST00000520909 CELA3AP09093 270 aa8□□□□□ -1.13
CLK4-207ENST00000520909 ATP2B2Q01814 1243 aa8□□□□□ -1.13
CLK4-207ENST00000520909 LETMD1Q6P1Q0 360 aa8□□□□□ -1.13
CLK4-207ENST00000520909 THAP5Q7Z6K1 395 aa8□□□□□ -1.13
CLK4-207ENST00000520909 SIAH1Q8IUQ4 282 aa8□□□□□ -1.13
CLK4-207ENST00000520909 HID1Q8IV36 788 aa8□□□□□ -1.13
CLK4-207ENST00000520909 FBXO15Q8NCQ5 510 aaPredicted RBP8□□□□□ -1.13
CLK4-207ENST00000520909 RIN3Q8TB24 985 aa8□□□□□ -1.13
CLK4-207ENST00000520909 UBE2FQ969M7 185 aa8□□□□□ -1.13
CLK4-207ENST00000520909 ST14Q9Y5Y6 855 aa8□□□□□ -1.13
CLK4-207ENST00000520909 CBX7O95931 251 aa7.99□□□□□ -1.13
CLK4-207ENST00000520909 CYP7A1P22680 504 aa7.99□□□□□ -1.13
CLK4-207ENST00000520909 NKG7Q16617 165 aa7.99□□□□□ -1.13
CLK4-207ENST00000520909 ALPK1Q96QP1 1244 aa7.99□□□□□ -1.13
CLK4-207ENST00000520909 FAM8A1Q9UBU6 413 aa7.99□□□□□ -1.13
CLK4-207ENST00000520909 BRD1O95696 1058 aa7.98□□□□□ -1.13
CLK4-207ENST00000520909 C1QTNF9P0C862 333 aa7.98□□□□□ -1.13
CLK4-207ENST00000520909 RAC2P15153 192 aa7.98□□□□□ -1.13
CLK4-207ENST00000520909 FMR1Q06787 632 aaKnown RBP eCLIP7.98□□□□□ -1.13
CLK4-207ENST00000520909 SV2BQ7L1I2 683 aa7.98□□□□□ -1.13
CLK4-207ENST00000520909 COX4I2Q96KJ9 171 aa7.98□□□□□ -1.13
CLK4-207ENST00000520909 DIRC2Q96SL1 478 aa7.98□□□□□ -1.13
CLK4-207ENST00000520909 SETDB2Q96T68 719 aa7.98□□□□□ -1.13
CLK4-207ENST00000520909 NSUN3Q9H649 340 aaKnown RBP7.98□□□□□ -1.13
CLK4-207ENST00000520909 C12orf49Q9H741 205 aa7.98□□□□□ -1.13
CLK4-207ENST00000520909 ZSWIM5Q9P217 1185 aa7.98□□□□□ -1.13
CLK4-207ENST00000520909 WWC3Q9ULE0 1092 aa7.98□□□□□ -1.13
CLK4-207ENST00000520909 USP17L7P0C7H9 530 aa7.97□□□□□ -1.13
CLK4-207ENST00000520909 TMEM253P0C7T8 217 aa7.97□□□□□ -1.13
CLK4-207ENST00000520909 WIPI1Q5MNZ9 446 aaPredicted RBP7.97□□□□□ -1.13
CLK4-207ENST00000520909 TTC6Q86TZ1 520 aa7.97□□□□□ -1.13
CLK4-207ENST00000520909 C1QL4Q86Z23 238 aa7.97□□□□□ -1.13
CLK4-207ENST00000520909 CST3P01034 146 aaPredicted RBP7.96□□□□□ -1.14
CLK4-207ENST00000520909 ZSCAN22P10073 491 aaPredicted RBP7.96□□□□□ -1.14
CLK4-207ENST00000520909 KIR3DL1P43629 444 aa7.96□□□□□ -1.14
CLK4-207ENST00000520909 PRAMEF13Q5VWM6 474 aa7.96□□□□□ -1.14
CLK4-207ENST00000520909 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.96□□□□□ -1.14
CLK4-207ENST00000520909 LCNL1Q6ZST4 164 aa7.96□□□□□ -1.14
CLK4-207ENST00000520909 ABHD4Q8TB40 342 aa7.96□□□□□ -1.14
CLK4-207ENST00000520909 SLAMF8Q9P0V8 285 aa7.96□□□□□ -1.14
CLK4-207ENST00000520909 TTBK2Q6IQ55 1244 aa7.95□□□□□ -1.14
CLK4-207ENST00000520909 XAGE3Q8WTP9 111 aa7.95□□□□□ -1.14
CLK4-207ENST00000520909 DCP1AQ9NPI6 582 aaPredicted RBP7.95□□□□□ -1.14
CLK4-207ENST00000520909 TTF2Q9UNY4 1162 aaKnown RBP7.95□□□□□ -1.14
CLK4-207ENST00000520909 KRT1P04264 644 aa7.94□□□□□ -1.14
CLK4-207ENST00000520909 LMNB1P20700 586 aa7.94□□□□□ -1.14
CLK4-207ENST00000520909 GRK4P32298 578 aa7.94□□□□□ -1.14
CLK4-207ENST00000520909 TMPRSS7Q7RTY8 843 aa7.94□□□□□ -1.14
CLK4-207ENST00000520909 CDH24Q86UP0 819 aa7.94□□□□□ -1.14
CLK4-207ENST00000520909 GAL3ST3Q96A11 431 aa7.94□□□□□ -1.14
CLK4-207ENST00000520909 FRMD6Q96NE9 622 aa7.94□□□□□ -1.14
CLK4-207ENST00000520909 ASB16Q96NS5 453 aa7.94□□□□□ -1.14
CLK4-207ENST00000520909 CDK8P49336 464 aa7.93□□□□□ -1.14
CLK4-207ENST00000520909 TNK2Q07912 1038 aa7.93□□□□□ -1.14
CLK4-207ENST00000520909 PIWIL2Q8TC59 973 aaKnown RBP7.93□□□□□ -1.14
CLK4-207ENST00000520909 TACC3Q9Y6A5 838 aa7.93□□□□□ -1.14
CLK4-207ENST00000520909 LILRA6Q6PI73 481 aa7.92□□□□□ -1.14
CLK4-207ENST00000520909 MYLIPQ8WY64 445 aa7.92□□□□□ -1.14
CLK4-207ENST00000520909 EPB41L4BQ9H329 900 aa7.92□□□□□ -1.14
CLK4-207ENST00000520909 DNAJC25-GNG10A0A024R161 153 aa7.91□□□□□ -1.14
CLK4-207ENST00000520909 NPIPB6E9PJ23 425 aa7.91□□□□□ -1.14
CLK4-207ENST00000520909 GFRA2O00451 464 aa7.91□□□□□ -1.14
CLK4-207ENST00000520909 ETV3P41162 512 aa7.91□□□□□ -1.14
CLK4-207ENST00000520909 RPS26P62854 115 aaKnown RBP7.91□□□□□ -1.14
CLK4-207ENST00000520909 TMEM59LQ9UK28 342 aa7.91□□□□□ -1.14
CLK4-207ENST00000520909 ESR1P03372 595 aa7.9□□□□□ -1.14
CLK4-207ENST00000520909 HK2P52789 917 aa7.9□□□□□ -1.14
CLK4-207ENST00000520909 RALGPS1Q5JS13 557 aa7.9□□□□□ -1.14
CLK4-207ENST00000520909 ATG14Q6ZNE5 492 aa7.9□□□□□ -1.14
CLK4-207ENST00000520909 AMIGO3Q86WK7 504 aa7.9□□□□□ -1.14
CLK4-207ENST00000520909 KCNN1Q92952 543 aa7.9□□□□□ -1.14
CLK4-207ENST00000520909 KCNK12Q9HB15 430 aa7.9□□□□□ -1.14
CLK4-207ENST00000520909 NCANO14594 1321 aa7.9□□□□□ -1.15
CLK4-207ENST00000520909 TCAF2A6NFQ2 919 aa7.89□□□□□ -1.15
CLK4-207ENST00000520909 PGRP06401 933 aa7.89□□□□□ -1.15
CLK4-207ENST00000520909 CCDC85BQ15834 202 aaPredicted RBP7.89□□□□□ -1.15
CLK4-207ENST00000520909 SLC6A19Q695T7 634 aa7.89□□□□□ -1.15
CLK4-207ENST00000520909 CREG2Q8IUH2 290 aa7.89□□□□□ -1.15
CLK4-207ENST00000520909 MRPL41Q8IXM3 137 aaKnown RBP7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms