RNA–Protein interactions for RNA: ENST00000520895.5

HDAC2-209, Transcript of histone deacetylase 2, humanhuman

TSL 4

Gene HDAC2, Length 551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-209ENST00000520895 FOXN1O15353 648 aa18.45■□□□□ 0.54
HDAC2-209ENST00000520895 GABPAQ06546 454 aa18.45■□□□□ 0.54
HDAC2-209ENST00000520895 CCL15Q16663 113 aa18.45■□□□□ 0.54
HDAC2-209ENST00000520895 SBK1Q52WX2 424 aa18.45■□□□□ 0.54
HDAC2-209ENST00000520895 OTUD7BQ6GQQ9 843 aa18.45■□□□□ 0.54
HDAC2-209ENST00000520895 SKAP1Q86WV1 359 aa18.45■□□□□ 0.54
HDAC2-209ENST00000520895 DYNLL2Q96FJ2 89 aa18.45■□□□□ 0.54
HDAC2-209ENST00000520895 MS4A4AQ96JQ5 239 aa18.45■□□□□ 0.54
HDAC2-209ENST00000520895 EPB41L4AQ9HCS5 686 aaPredicted RBP18.45■□□□□ 0.54
HDAC2-209ENST00000520895 GINM1Q9NU53 330 aa18.45■□□□□ 0.54
HDAC2-209ENST00000520895 RNF186Q9NXI6 227 aa18.45■□□□□ 0.54
HDAC2-209ENST00000520895 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.45■□□□□ 0.54
HDAC2-209ENST00000520895 CCDC171Q6TFL3 1326 aa18.45■□□□□ 0.54
HDAC2-209ENST00000520895 TESPA1A2RU30 521 aaPredicted RBP18.44■□□□□ 0.54
HDAC2-209ENST00000520895 USP17L5A8MUK1 530 aa18.44■□□□□ 0.54
HDAC2-209ENST00000520895 CXCL11O14625 94 aa18.44■□□□□ 0.54
HDAC2-209ENST00000520895 TRPA1O75762 1119 aa18.44■□□□□ 0.54
HDAC2-209ENST00000520895 SHMT1P34896 483 aa18.44■□□□□ 0.54
HDAC2-209ENST00000520895 CTCFP49711 727 aaPredicted RBP18.44■□□□□ 0.54
HDAC2-209ENST00000520895 ABCB5Q2M3G0 1257 aa18.44■□□□□ 0.54
HDAC2-209ENST00000520895 CCDC84Q86UT8 332 aaPredicted RBP18.44■□□□□ 0.54
HDAC2-209ENST00000520895 IFNL1Q8IU54 200 aa18.44■□□□□ 0.54
HDAC2-209ENST00000520895 TBC1D2Q9BYX2 928 aa18.44■□□□□ 0.54
HDAC2-209ENST00000520895 AS3MTQ9HBK9 375 aa18.44■□□□□ 0.54
HDAC2-209ENST00000520895 CABP5Q9NP86 173 aa18.44■□□□□ 0.54
HDAC2-209ENST00000520895 SAGE1Q9NXZ1 904 aa18.44■□□□□ 0.54
HDAC2-209ENST00000520895 ZBTB21Q9ULJ3 1066 aa18.44■□□□□ 0.54
HDAC2-209ENST00000520895 KCNH4Q9UQ05 1017 aa18.44■□□□□ 0.54
HDAC2-209ENST00000520895 TRIM75PA6NK02 468 aa18.43■□□□□ 0.54
HDAC2-209ENST00000520895 ALDH1A1P00352 501 aa18.43■□□□□ 0.54
HDAC2-209ENST00000520895 GH2P01242 217 aa18.43■□□□□ 0.54
HDAC2-209ENST00000520895 VPS53Q5VIR6 699 aa18.43■□□□□ 0.54
HDAC2-209ENST00000520895 SLC44A5Q8NCS7 719 aa18.43■□□□□ 0.54
HDAC2-209ENST00000520895 BRI3BPQ8WY22 251 aa18.43■□□□□ 0.54
HDAC2-209ENST00000520895 AFG3L2Q9Y4W6 797 aa18.43■□□□□ 0.54
HDAC2-209ENST00000520895 IGF2BP3O00425 579 aaKnown RBP eCLIP18.42■□□□□ 0.54
HDAC2-209ENST00000520895 MPHOSPH10O00566 681 aaKnown RBP18.42■□□□□ 0.54
HDAC2-209ENST00000520895 SLC3A2P08195 630 aaKnown RBP18.42■□□□□ 0.54
HDAC2-209ENST00000520895 CDK8P49336 464 aa18.42■□□□□ 0.54
HDAC2-209ENST00000520895 RAB3GAP1Q15042 981 aa18.42■□□□□ 0.54
HDAC2-209ENST00000520895 C16orf86Q6ZW13 317 aa18.42■□□□□ 0.54
HDAC2-209ENST00000520895 ZNF589Q86UQ0 364 aaPredicted RBP18.42■□□□□ 0.54
HDAC2-209ENST00000520895 STK11IPQ8N1F8 1099 aa18.42■□□□□ 0.54
HDAC2-209ENST00000520895 ZNF280CQ8ND82 737 aa18.42■□□□□ 0.54
HDAC2-209ENST00000520895 TSKSQ9UJT2 592 aa18.42■□□□□ 0.54
HDAC2-209ENST00000520895 SMIM22K7EJ46 135 aa18.41■□□□□ 0.54
HDAC2-209ENST00000520895 JAG1P78504 1218 aa18.41■□□□□ 0.54
HDAC2-209ENST00000520895 SPP2Q13103 211 aa18.41■□□□□ 0.54
HDAC2-209ENST00000520895 SHROOM1Q2M3G4 852 aaPredicted RBP18.41■□□□□ 0.54
HDAC2-209ENST00000520895 RUFY2Q8WXA3 655 aa18.41■□□□□ 0.54
HDAC2-209ENST00000520895 PTPN18Q99952 460 aa18.41■□□□□ 0.54
HDAC2-209ENST00000520895 MKNK2Q9HBH9 465 aa18.41■□□□□ 0.54
HDAC2-209ENST00000520895 ZNF287Q9HBT7 754 aa18.41■□□□□ 0.54
HDAC2-209ENST00000520895 PTPRFP10586 1907 aa18.41■□□□□ 0.54
HDAC2-209ENST00000520895 HSPD1P10809 573 aaKnown RBP18.4■□□□□ 0.54
HDAC2-209ENST00000520895 HSPA8P11142 646 aaKnown RBP18.4■□□□□ 0.54
HDAC2-209ENST00000520895 FASTKD5Q7L8L6 764 aaKnown RBP18.4■□□□□ 0.54
HDAC2-209ENST00000520895 CCDC17Q96LX7 622 aa18.4■□□□□ 0.54
HDAC2-209ENST00000520895 WDR18Q9BV38 432 aa18.4■□□□□ 0.54
HDAC2-209ENST00000520895 ROBO3Q96MS0 1386 aa18.4■□□□□ 0.54
HDAC2-209ENST00000520895 A0A0G2JLL6 359 aaPredicted RBP18.39■□□□□ 0.53
HDAC2-209ENST00000520895 FOXP2O15409 715 aa18.39■□□□□ 0.53
HDAC2-209ENST00000520895 TBC1D8O95759 1140 aa18.39■□□□□ 0.53
HDAC2-209ENST00000520895 CHMLP26374 656 aa18.39■□□□□ 0.53
HDAC2-209ENST00000520895 LBX1P52954 281 aa18.39■□□□□ 0.53
HDAC2-209ENST00000520895 PPARAQ07869 468 aa18.39■□□□□ 0.53
HDAC2-209ENST00000520895 ALX1Q15699 326 aa18.39■□□□□ 0.53
HDAC2-209ENST00000520895 BMP2KLQ5H9B9 411 aa18.39■□□□□ 0.53
HDAC2-209ENST00000520895 GADL1Q6ZQY3 521 aa18.39■□□□□ 0.53
HDAC2-209ENST00000520895 PRRT2Q7Z6L0 340 aaPredicted RBP18.39■□□□□ 0.53
HDAC2-209ENST00000520895 BTBD19C9JJ37 291 aa18.38■□□□□ 0.53
HDAC2-209ENST00000520895 FGAP02671 866 aa18.38■□□□□ 0.53
HDAC2-209ENST00000520895 AKR1B1P15121 316 aa18.38■□□□□ 0.53
HDAC2-209ENST00000520895 PDE4BQ07343 736 aa18.38■□□□□ 0.53
HDAC2-209ENST00000520895 TMEM179Q6ZVK1 233 aa18.38■□□□□ 0.53
HDAC2-209ENST00000520895 FAM43AQ8N2R8 423 aa18.38■□□□□ 0.53
HDAC2-209ENST00000520895 RAD50Q92878 1312 aa18.38■□□□□ 0.53
HDAC2-209ENST00000520895 USP17L10C9JJH3 530 aa18.37■□□□□ 0.53
HDAC2-209ENST00000520895 MTMR2Q13614 643 aa18.37■□□□□ 0.53
HDAC2-209ENST00000520895 SEPT2Q15019 361 aa18.37■□□□□ 0.53
HDAC2-209ENST00000520895 TAF1CQ15572 869 aaPredicted RBP18.37■□□□□ 0.53
HDAC2-209ENST00000520895 ANKRD23Q86SG2 305 aa18.37■□□□□ 0.53
HDAC2-209ENST00000520895 ZNF444Q8N0Y2 327 aaPredicted RBP18.37■□□□□ 0.53
HDAC2-209ENST00000520895 FEZ1Q99689 392 aa18.37■□□□□ 0.53
HDAC2-209ENST00000520895 ZCCHC17Q9NP64 241 aaKnown RBP18.37■□□□□ 0.53
HDAC2-209ENST00000520895 PRDM10Q9NQV6 1147 aa18.37■□□□□ 0.53
HDAC2-209ENST00000520895 TMOD4Q9NZQ9 345 aa18.37■□□□□ 0.53
HDAC2-209ENST00000520895 C19orf81C9J6K1 198 aa18.36■□□□□ 0.53
HDAC2-209ENST00000520895 PDHXO00330 501 aa18.36■□□□□ 0.53
HDAC2-209ENST00000520895 ZMYM6O95789 1325 aa18.36■□□□□ 0.53
HDAC2-209ENST00000520895 HMGCS2P54868 508 aa18.36■□□□□ 0.53
HDAC2-209ENST00000520895 BACE1P56817 501 aa18.36■□□□□ 0.53
HDAC2-209ENST00000520895 COL13A1Q5TAT6 717 aaPredicted RBP18.36■□□□□ 0.53
HDAC2-209ENST00000520895 ZFYVE28Q9HCC9 887 aa18.36■□□□□ 0.53
HDAC2-209ENST00000520895 LOC285556D6RIA3 1793 aa18.35■□□□□ 0.53
HDAC2-209ENST00000520895 PRDM1O75626 825 aa18.35■□□□□ 0.53
HDAC2-209ENST00000520895 GUCY1A2P33402 732 aa18.35■□□□□ 0.53
HDAC2-209ENST00000520895 CTDSPL2Q05D32 466 aa18.35■□□□□ 0.53
HDAC2-209ENST00000520895 CRHR2Q13324 411 aa18.35■□□□□ 0.53
HDAC2-209ENST00000520895 MOGSQ13724 837 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms